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Platform GPL10190 Query DataSets for GPL10190
Status Public on Apr 30, 2011
Title BMR Mouse 32K Chip
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Bio Matrix Research, Inc.
Manufacture protocol Operon Mus musculus AROS ver 3.0 probe (32,000 probe) were spotted on glass. Details can be found at the manufacturer’s website (http://www.biomatrix.co.jp/eng/index.html).
 
 
Submission date Mar 16, 2010
Last update date Apr 30, 2011
Contact name Ryo Abe
Organization name Tokyo University of Science
Department Research Institute for Biological Sciences
Lab Division of Immunobiology
Street address 2669 Yamazaki
City Noda
State/province Chiba
ZIP/Postal code 278-0022
Country Japan
 
Samples (1) GSM523458
Series (1)
GSE20922 Gene expression comparison between the murine T-cell hybridoma 6-13-64 ICOS(-) population and ICOS(+) population

Data table header descriptions
ID
OLIGO_ID Oligo ID number of oligonucleotide probe in Operon mouse genome oligo set ver 3.0
SEQUENCE Sequence of oligonucleotide probe
GENE_SYMBOL Symbol of gene
GB_LIST GenBank or RefSeq accession number of sequence used to design oligonucleotide probe
DESCRIPTION Gene description
SPOT_ID

Data table
ID OLIGO_ID SEQUENCE GENE_SYMBOL GB_LIST DESCRIPTION SPOT_ID
1 M200000001 TGGAAGCCTAGGTGGGCTGGGGCAAGCAGAAATAAAAATGAGAGAAGGGAGATATTGTTTGGATTTCCT Hoxa10 BC050839, L08757 Homeobox protein Hox-A10 (Hox-1.8). [Source:Uniprot/SWISSPROT;Acc:P31310]
2 M200000002 GCAGGATTTCTCTGCCTCTGCCAACCTTTTCTTCCCTGAACCTGAGAGAAACTAACCTGGAGTCACTTC Vim M26251 Vimentin. [Source:Uniprot/SWISSPROT;Acc:P20152]
3 M200000004 GACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCA Srm BC005566, L19311 Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY). [Source:Uniprot/SWISSPROT;Acc:Q64674]
4 M200000005 GCCCCCAGTGGCCAAGTGTTTCGGATCATTCCAGGGGCCTCGTGATAACTGCTAAGGAAGGAGGAGCAA Myf6 X59060, AK029370 Myogenic factor 6 (Myf-6) (Herculin). [Source:Uniprot/SWISSPROT;Acc:P15375]
5 M200000006 CTGGTGACCTGGCCTGCAGTTTGAACCCCTTTTTATTTTGCAATGTACCCTAAAGGAGGCTGCTGTGAA Bcap31 X81816 B-cell receptor-associated protein 31 (BCR-associated protein Bap31) (p28 Bap31). [Source:Uniprot/SWISSPROT;Acc:Q61335]
6 M200000007 AGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCA SEP1_MOUSE M37030 Septin 1 (Differentiation protein 6) (Diff6 protein). [Source:Uniprot/SWISSPROT;Acc:P42209]
7 M200000008 GTATATGAGCAAACTCGCTCAGACTGTAAGGACCCAAATTATGGAGGATGTCCACACTGGGGCTGCAAA AK005451, NM_028045
8 M200000009 GCCGAGTGACGACCGCACACGCTTTGTTTGGACGCGGAGTGAACACAATTATGTACCAAATTTAACTTG Hnrpab AK013384, D90151 Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A). [Source:Uniprot/SWISSPROT;Acc:Q99020]
9 M200000010 CCTGTGCAGCCCCTTAGGAATAGCAGGTACCTTTTACACACAGAGAAGCTGTGTTTAGGATGATCACTT Gas2 M21828 Growth-arrest-specific protein 2 (GAS-2). [Source:Uniprot/SWISSPROT;Acc:P11862]
10 M200000011 ATGGAGGGCGTGGGGTCGTCGCACCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAAA Bcl7b AJ011145, BC011471 B-cell CLL/lymphoma 7B. [Source:RefSeq;Acc:NM_009745]
11 M200000012 AGCCTCTCAGCAATGCTTACCATGAGTTAGCACAAGTTTATTCAACCAACAACCCGTCTGAGCTGCGGA Cops3 AF071313, BC068179 COP9 (constitutive photomorphogenic), subunit 3; COP9 (constitutive photomorphogenic), subunit 3 (Arabidopsis); COP9 complex S3. [Source:RefSeq;Acc:NM_011991]
12 M200000014 AGCCCCTCAAGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAAG Myl4 Myosin light chain 1, atrial/fetal isoform (MLC1A) (MLC1EMB). [Source:Uniprot/SWISSPROT;Acc:P09541] UniProt:P09541
13 M200000016 CCTAACTGTATGGACCATCTTCAAACTGCTGGATCCCCTGTATATGTTGAATGATGCCTGGTGGTCTTA D11Ertd99e AK019025, CA450971
14 M200000017 ATGCCATACCTTTACTTTCTCTCACGCTACCTTCTGTGGGCCAGTCCGGCCCTACTTCAGCCTAAGCTA Trim27 L46855, BC069924 Zinc-finger protein RFP (Ret finger protein) (Tripartite motif protein 27). [Source:Uniprot/SWISSPROT;Acc:Q62158]
15 M200000019 AACGTAGTGACGGAGGGAAATGACATTGCGCTCTTGAAGATCACTCCTCCTGTTACATGTGGGAACTTC Acr D00754, AK006695 Acrosin precursor (EC 3.4.21.10). [Source:Uniprot/SWISSPROT;Acc:P23578]
16 M200000020 TGACCTTGGCCCCTAACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGTTCTTCT Itgb7 AK078871, M68903 Integrin beta-7 precursor (Integrin beta-P) (M290 IEL antigen). [Source:Uniprot/SWISSPROT;Acc:P26011]
17 M200000021 GTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGAACTAGGAAGCCCTCAT Pde1b L01695, BC058531 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (EC 3.1.4.17) (Cam-PDE 1B) (63 kDa Cam-PDE). [Source:Uniprot/SWISSPROT;Acc:Q01065]
18 M200000023 CACTGGACAATGGACTGTTTACACTGGGAGCTCCACACAGAGAAGTTGATGAAGGCCCCAGTCCTCCAG Frg1 AA016442, U62105 FRG1 protein. [Source:Uniprot/SWISSPROT;Acc:P97376]
19 M200000025 AGGACCTCCTAGACCTTCGCTGACAGCAGTATATTTCTGACAGACAGAGGAAATCTACTTTATGGTGCT Prkdc D87521 DNA-dependent protein kinase catalytic subunit (EC 2.7.1.37) (DNA- PKcs) (P460). [Source:Uniprot/SWISSPROT;Acc:P97313]
20 M200000027 AGAGATCTCCGTGGGCCACACTAAGCAGTTACTAAGAGATGTATCTGAACTGCCGATCCTTGGTGAAAT Itgae U12236 Integrin alpha-E precursor (Integrin alpha M290). [Source:Uniprot/SWISSPROT;Acc:Q60677]

Total number of rows: 32148

Table truncated, full table size 4906 Kbytes.




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