High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Description
The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features. The .ndf and .ngd files are linked below as supplementary files. native array description file: 090121_Lusi_BT_exp.ndf native array description file: 090121_Lusi_BT_exp.ngd
Transcriptomics and metabolomics profiling in Flax stem tissues containing contrasted secondary cell wall architectures.
Data table header descriptions
ID
Gene_ID
gene description
SPOT_ID
Data table
ID
Gene_ID
SPOT_ID
GENOLIN_C1
lcl|genolin_c1 1018 nt highly similar to |EU117376|EU117376|Manihot esculenta cultivar TME3 chloroplast, complete genome. |Manihot esculenta (cassava) |circular|161453
lcl|genolin_c1 1018 nt highly similar to |EU117376|EU117376|Manihot esculenta cultivar TME3 chloroplast, complete genome. |Manihot esculenta (cassava) |circular|161453
GENOLIN_C10
lcl|genolin_c10 1858 nt highly similar to |Q9AT55|Q9AT55|RecName: Full=S-adenosylmethionine synthetase; EC=2.5.1.6; |Elaeagnus umbellata (Autumn olive) |AA|393
lcl|genolin_c10 1858 nt highly similar to |Q9AT55|Q9AT55|RecName: Full=S-adenosylmethionine synthetase; EC=2.5.1.6; |Elaeagnus umbellata (Autumn olive) |AA|393
GENOLIN_C100
lcl|genolin_c100 1394 nt highly similar to |P23322|P23322|RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic; Short=OEE1; AltName: Full=33 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=OEC 33 kDa subunit; AltName: Ful
lcl|genolin_c100 1394 nt highly similar to |P23322|P23322|RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic; Short=OEE1; AltName: Full=33 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=OEC 33 kDa subunit; AltName: Ful
GENOLIN_C1000
lcl|genolin_c1000 1149 nt highly similar to |Q9LHP1|Q9LHP1|RecName: Full=60S ribosomal protein L7-4; |Arabidopsis thaliana (Mouse-ear cress) |AA|244
lcl|genolin_c1000 1149 nt highly similar to |Q9LHP1|Q9LHP1|RecName: Full=60S ribosomal protein L7-4; |Arabidopsis thaliana (Mouse-ear cress) |AA|244
GENOLIN_C10000
lcl|genolin_c10000 840 nt highly similar to |B5LNQ2|B5LNQ2|SubName: Full=Pathogenesis-induced protein; |Arachis hypogaea (Peanut) |AA|193
lcl|genolin_c10000 840 nt highly similar to |B5LNQ2|B5LNQ2|SubName: Full=Pathogenesis-induced protein; |Arachis hypogaea (Peanut) |AA|193
GENOLIN_C10001
lcl|genolin_c10001 861 nt similar to |Q9LVI4|Q9LVI4|RecName: Full=Protein TIFY 6B; AltName: Full=Jasmonate ZIM domain-containing protein 3; AltName: Full=Protein JASMONATE INSENSITIVE 3; |Arabidopsis thaliana (Mouse-ear cress) |AA|352
lcl|genolin_c10001 861 nt similar to |Q9LVI4|Q9LVI4|RecName: Full=Protein TIFY 6B; AltName: Full=Jasmonate ZIM domain-containing protein 3; AltName: Full=Protein JASMONATE INSENSITIVE 3; |Arabidopsis thaliana (Mouse-ear cress) |AA|352
GENOLIN_C10002
lcl|genolin_c10002 542 nt
lcl|genolin_c10002 542 nt
GENOLIN_C10003
lcl|genolin_c10003 570 nt
lcl|genolin_c10003 570 nt
GENOLIN_C10004
lcl|genolin_c10004 371 nt
lcl|genolin_c10004 371 nt
GENOLIN_C10005
lcl|genolin_c10005 772 nt highly similar to |Q9FG73|Q9FG73|SubName: Full=Nucleolar protein-like; |Arabidopsis thaliana (Mouse-ear cress) |AA|682
lcl|genolin_c10005 772 nt highly similar to |Q9FG73|Q9FG73|SubName: Full=Nucleolar protein-like; |Arabidopsis thaliana (Mouse-ear cress) |AA|682
GENOLIN_C10007
lcl|genolin_c10007 1157 nt highly similar to |Q8LEA6|Q8LEA6|SubName: Full=Pantoate-beta-alanine ligase; |Arabidopsis thaliana (Mouse-ear cress) |AA|310
lcl|genolin_c10007 1157 nt highly similar to |Q8LEA6|Q8LEA6|SubName: Full=Pantoate-beta-alanine ligase; |Arabidopsis thaliana (Mouse-ear cress) |AA|310
GENOLIN_C10008
lcl|genolin_c10008 1469 nt highly similar to |Q6Z6G6|Q6Z6G6|SubName: Full=N-type ATP pyrophosphatase-like (Os02g0762300 protein); |Oryza sativa subsp japonica (Rice) |AA|363
lcl|genolin_c10008 1469 nt highly similar to |Q6Z6G6|Q6Z6G6|SubName: Full=N-type ATP pyrophosphatase-like (Os02g0762300 protein); |Oryza sativa subsp japonica (Rice) |AA|363
GENOLIN_C10009
lcl|genolin_c10009 1025 nt highly similar to |A1IW23|A1IW23|SubName: Full=MYB transcription factor; Flags: Fragment; |Phillyrea latifolia |AA|159
lcl|genolin_c10009 1025 nt highly similar to |A1IW23|A1IW23|SubName: Full=MYB transcription factor; Flags: Fragment; |Phillyrea latifolia |AA|159
GENOLIN_C1001
lcl|genolin_c1001 580 nt
lcl|genolin_c1001 580 nt
GENOLIN_C10010
lcl|genolin_c10010 854 nt similar to |AM445372|AM445372|Vitis vinifera contig VV78X203055.8, whole genome shotgun sequence. |Vitis vinifera |linear|14910
lcl|genolin_c10010 854 nt similar to |AM445372|AM445372|Vitis vinifera contig VV78X203055.8, whole genome shotgun sequence. |Vitis vinifera |linear|14910
GENOLIN_C10011
lcl|genolin_c10011 530 nt similar to |X96598|X96598|A.thaliana mRNA for CaLB protein |Arabidopsis thaliana (thale cress) |linear|1836
lcl|genolin_c10011 530 nt similar to |X96598|X96598|A.thaliana mRNA for CaLB protein |Arabidopsis thaliana (thale cress) |linear|1836
GENOLIN_C10013
lcl|genolin_c10013 874 nt
lcl|genolin_c10013 874 nt
GENOLIN_C10015
lcl|genolin_c10015 846 nt highly similar to |Q76KW1|Q76KW1|SubName: Full=Glutathione S-transferase; |Pisum sativum (Garden pea) |AA|234
lcl|genolin_c10015 846 nt highly similar to |Q76KW1|Q76KW1|SubName: Full=Glutathione S-transferase; |Pisum sativum (Garden pea) |AA|234