GEO help: Mouse over screen elements for information.
Status
Public on Feb 07, 2011
Title
090313_Zv7_PC_ChIP_HX1
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Danio rerio Manufacturer
NimbleGen
Manufacture protocol
See manufacturer's web site (www.nimblegen.com)
Description
Sanger Zv7 assembly
Submission date
Aug 18, 2010
Last update date
Feb 09, 2011
Contact name
Philippe Collas
Organization name
University of Oslo
Department
Institute of Basic Medical Sciences
Street address
PO Box 1112 Blindern
City
Oslo
ZIP/Postal code
0317
Country
Norway
Samples (47)
GSM581033 , GSM581034 , GSM581035 , GSM581036 , GSM675174 , GSM675175
GSM675176 ,
GSM675177 ,
GSM675178 ,
GSM675179 ,
GSM675180 ,
GSM675181 ,
GSM675182 ,
GSM675183 ,
GSM675184 ,
GSM675185 ,
GSM675186 ,
GSM675187 ,
GSM675188 ,
GSM675189 ,
GSM675190 ,
GSM675191 ,
GSM675192 ,
GSM675193 ,
GSM675194 ,
GSM675195 ,
GSM675196 ,
GSM675197 ,
GSM675198 ,
GSM822655 ,
GSM822656 ,
GSM822657 ,
GSM822658 ,
GSM822659 ,
GSM822660 ,
GSM822661 ,
GSM822662 ,
GSM913999 ,
GSM914000 ,
GSM914001 ,
GSM914002 ,
GSM1287704 ,
GSM1287705 ,
GSM1287706 ,
GSM1287707 ,
GSM1287708 ,
GSM1287709 Series (5)
GSE23691 Mapping of H3K4 and H3K27 trimethylation in zebrafish cells (ChIP-chip)
GSE23872 Mapping of H3K4 and H3K27 trimethylation in zebrafish cells
GSE27314 Marking of the genome by H3K4 methylation prior to embryonic gene activation
GSE33236 Developmental features of DNA methylation during activation of the embryonic zebrafish genome
GSE53209 The S-adenosyl-homosteine hydrolase inhibitor DZNeP unspecifically affects histone methylation patterns in embryos and results in developmental aberrations
Data table header descriptions ID SEQUENCE Sequence of oligo
Chromosome Chromosomal location
RANGE_START Chromosomal start position of oligo
LENGTH Oligo length
RANGE_END Chromosomal end position of oligo
Data table ID SEQUENCE Chromosome RANGE_START LENGTH RANGE_END CHR01FS000015029
TATACGTCTGTAAAACAGCAGAGCATGAGCTGCAGATTAATACAGAACATCCCTTTATATCACA
chr1
15029
64
15092
CHR01FS000015119
ACTGTTGAAGGATAACTGCAGGAGGACAGATCAACACCTCATGATGCAGC
chr1
15119
50
15168
CHR01FS000015501
AACCAGAGACCTGAGTGCTGTGAGACCACAGTGCGACACCACTGCGCCAC
chr1
15501
50
15550
CHR01FS000015597
CTGCTGTTCTGGAGGGCATCAGTTTAGAGTTGAATGTTATTCTGCCTTCAT
chr1
15597
51
15647
CHR01FS000015679
ACTGTTCAGGGTTCGGCCTGTTTGAGCTTCGAGTGCTGAACTCTGACAAA
chr1
15679
50
15728
CHR01FS000015755
CTACAGTCATCCACAGCAGCAGAGTATTGATCAATATCAGAGCACACACA
chr1
15755
50
15804
CHR01FS000015943
GAAAATCTACAGCTGCATAGATTAATCTTAGAGATGAGAACTAACCCTCTTAACATGAGCAACA
chr1
15943
64
16006
CHR01FS000016141
CACACACACGAACTTCCACAGAAATGTGGTATATGGTAATATGCAAATTACATATTTGACAA
chr1
16141
62
16202
CHR01FS000016227
TGTATGAGACGTGTCCTGTATACAGTAAACGGATGTTTATAGAGGCGCAG
chr1
16227
50
16276
CHR01FS000016483
TCCACTGTGGAGAACCCTGGTAAATAAGAGACTAAGCGGAAGGAAAATGAAT
chr1
16483
52
16534
CHR01FS000016567
CTGAAGTCAGAGTGATCCTCCTGTGAACTCTCTTTCTTCCTCCAGTATTC
chr1
16567
50
16616
CHR01FS000016767
CTTCAGCAATATTAGAGTTGGATTAGCCTAACTCTACCCTGATTACCCTGATTAACTG
chr1
16767
58
16824
CHR01FS000016857
CATCATGGAGAGGAGGACAGACGGCAGTCATCAGAGTCGAGCTATCACAC
chr1
16857
50
16906
CHR01FS000016935
TAAACAGACACTGGGGAAAATCTAAAAGCATGAGCCGTCAGCAGGAGGGA
chr1
16935
50
16984
CHR01FS000017013
TGTCCATATCTGTACCTGCAGTGACGGCCGCTCTCTCCTGCTCGTGTGCA
chr1
17013
50
17062
CHR01FS000017113
TCAGACACTGTTAACTCAATGATGGATGTGCTCATCTCCTGCTGACACTAA
chr1
17113
51
17163
CHR01FS000017215
GTGTGTGTGCGGGTCACTCAGAGAGTCTGATCACTTCATCAGGAGAGGAG
chr1
17215
50
17264
CHR01FS000017283
TGACCGCAGGTATGTCAGGTATTGTGTTACGCGGGTCAGTAAACACACCT
chr1
17283
50
17332
CHR01FS000017385
ATCATGACACGAGAGCTATAGAGAAACACTGTAGATGAGGTAAATCACAGAGTCAAGA
chr1
17385
58
17442
CHR01FS000017485
CTCAGGTGAGAGGAGGATCCGCCTGCAGGTAAAGGGTTTTGTTAATAAAA
chr1
17485
50
17534
2168225 211225 Kbytes .Supplementary file Size Download File type/resource GPL10835_090313_Zv7_PC_ChIP_HX1.ndf.gz
142.0 Mb
(ftp) (http) NDF
GPL10835_090313_Zv7_PC_ChIP_HX1.pos.gz
18.8 Mb
(ftp) (http) POS
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