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Status
Public on Jun 01, 2011
Title
Illumina Custom Prostate Cancer DASL Panel miRNA
Technology type
oligonucleotide beads
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Illumina Inc.
Manufacture protocol
Sentrix® Array Matrix The sophisticated Sentrix Array Matrix (SAM) platform is a fiber-optic assembly composed of 96 individual arrays arranged in an 8-by-12 format, matching the well spacing of a standard microwell plate. Each individual array in the matrix holds 1,536 different oligonucleotide probe sequences (IllumiCode sequences), in turn attached to 3-micron beads assembled into microwells at the end of the optical fiber bundle. Because the microwells outnumber probe sequences, multiple copies of each bead type are present in the array. This built-in redundancy further improves robustness and measurement precision. The SAM manufacturing process includes hybridization-based quality control for each array feature, allowing consistent production of high-quality, reproducible arrays. See manufacturer's website for more details.
Submission date
Dec 21, 2010
Last update date
Jun 01, 2011
Contact name
Gregory Doho
E-mail(s)
gdoho@emory.edu Organization name
Emory University
Street address
1365B Clifton Rd NE
City
Atlanta
State/province
GA
ZIP/Postal code
30322
Country
USA
Samples (214)
GSM644235 , GSM644236 , GSM644237 , GSM644238 , GSM644239 , GSM644240
GSM644241 ,
GSM644242 ,
GSM644243 ,
GSM644244 ,
GSM644245 ,
GSM644246 ,
GSM644247 ,
GSM644248 ,
GSM644249 ,
GSM644250 ,
GSM644251 ,
GSM644252 ,
GSM644253 ,
GSM644254 ,
GSM644255 ,
GSM644256 ,
GSM644257 ,
GSM644258 ,
GSM644259 ,
GSM644260 ,
GSM644261 ,
GSM644262 ,
GSM644263 ,
GSM644264 ,
GSM644265 ,
GSM644266 ,
GSM644267 ,
GSM644268 ,
GSM644269 ,
GSM644270 ,
GSM644271 ,
GSM644272 ,
GSM644273 ,
GSM644274 ,
GSM644275 ,
GSM644276 ,
GSM644277 ,
GSM644278 ,
GSM644279 ,
GSM644280 ,
GSM644281 ,
GSM644282 ,
GSM644283 ,
GSM644284 ,
GSM644285 ,
GSM644286 ,
GSM644287 ,
GSM644288 ,
GSM644289 ,
GSM644290 ,
GSM644291 ,
GSM644292 ,
GSM644293 ,
GSM644294 ,
GSM644295 ,
GSM644296 ,
GSM644297 ,
GSM644298 ,
GSM644299 ,
GSM644300 ,
GSM644301 ,
GSM644302 ,
GSM644303 ,
GSM644304 ,
GSM644305 ,
GSM644306 ,
GSM644307 ,
GSM644308 ,
GSM644309 ,
GSM644310 ,
GSM644311 ,
GSM644312 ,
GSM644313 ,
GSM644314 ,
GSM644315 ,
GSM644316 ,
GSM644317 ,
GSM644318 ,
GSM644319 ,
GSM644320 ,
GSM644321 ,
GSM644322 ,
GSM644323 ,
GSM644324 ,
GSM644325 ,
GSM644326 ,
GSM644327 ,
GSM644328 ,
GSM644329 ,
GSM644330 ,
GSM644392 ,
GSM644393 ,
GSM644394 ,
GSM644395 ,
GSM644396 ,
GSM644397 ,
GSM644398 ,
GSM644399 ,
GSM644400 ,
GSM644401 ,
GSM644402 ,
GSM644403 ,
GSM644404 ,
GSM644405 ,
GSM644406 ,
GSM644407 ,
GSM644408 ,
GSM644409 ,
GSM644410 ,
GSM644411 ,
GSM644412 ,
GSM644413 ,
GSM644414 ,
GSM644415 ,
GSM644416 ,
GSM644417 ,
GSM644418 ,
GSM644419 ,
GSM644420 ,
GSM644421 ,
GSM644422 ,
GSM644423 ,
GSM644424 ,
GSM644425 ,
GSM644426 ,
GSM644427 ,
GSM644428 ,
GSM644429 ,
GSM644430 ,
GSM644431 ,
GSM644432 ,
GSM644433 ,
GSM644434 ,
GSM644435 ,
GSM644436 ,
GSM644437 ,
GSM644438 ,
GSM644439 ,
GSM644440 ,
GSM644441 ,
GSM644442 ,
GSM644443 ,
GSM644444 ,
GSM644445 ,
GSM644446 ,
GSM644447 ,
GSM644448 ,
GSM644449 ,
GSM644450 ,
GSM644451 ,
GSM644452 ,
GSM644453 ,
GSM644454 ,
GSM644455 ,
GSM644456 ,
GSM644457 ,
GSM644458 ,
GSM644459 ,
GSM644460 ,
GSM644461 ,
GSM644462 ,
GSM644463 ,
GSM644464 ,
GSM644465 ,
GSM644466 ,
GSM644467 ,
GSM644468 ,
GSM644469 ,
GSM644470 ,
GSM644471 ,
GSM644472 ,
GSM644473 ,
GSM644474 ,
GSM644475 ,
GSM644476 ,
GSM644477 ,
GSM644478 ,
GSM644479 ,
GSM644480 ,
GSM644481 ,
GSM644482 ,
GSM644483 ,
GSM644484 ,
GSM644485 ,
GSM644486 ,
GSM644487 ,
GSM814514 ,
GSM814515 ,
GSM814516 ,
GSM814517 ,
GSM814518 ,
GSM814519 ,
GSM814520 ,
GSM814521 ,
GSM814522 ,
GSM814523 ,
GSM814524 ,
GSM814525 ,
GSM814526 ,
GSM814527 ,
GSM814528 ,
GSM814529 ,
GSM814530 ,
GSM814531 ,
GSM814532 ,
GSM814533 ,
GSM814534 ,
GSM814535 Series (4)
GSE26245 [miRNA Training Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
GSE26247 [miRNA Validation Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
GSE26367 Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
GSE32906 Differential expressed miRNAs in Multi-stages and Lymphoid node metastasis of Nasopharyngeal Carcinoma
Data table header descriptions ID SEARCH_KEY Internal id useful for custom design array
PROBE_ID Illumina ID
CHROMOSOME Chromosome number
TargetID Target miRNA
SEQUENCE Probe sequence
SPECIES Species
miRNA_ID miRNA_ID SPOT_ID spot identifier
Data table ID SEARCH_KEY PROBE_ID CHROMOSOME TargetID SEQUENCE SPECIES miRNA_ID miRNA_ID SPOT_ID ILMN_3167304
HS_1
ILMN_3167304
0
HS_1
GATGCTGGGGAGCCATG
human
HS_1
ILMN_3168038
HS_10
ILMN_3168038
0
HS_10
ACTGGAGATATGGAAGAGCT
human
HS_10
ILMN_3167890
HS_100
ILMN_3167890
0
HS_100
ATCCCACCGCTGCCAAAA
human
HS_100
ILMN_3167526
HS_101
ILMN_3167526
0
HS_101
TCCTGTCTGTTCTCCCC
human
HS_101
ILMN_3167209
HS_104
ILMN_3167209
0
HS_104
ACCCCTTCGGCTGCTGGG
human
HS_104
ILMN_3168219
HS_105
ILMN_3168219
0
HS_105
CTGGGCGGGTGGTAGGT
human
HS_105
ILMN_3167464
HS_106
ILMN_3167464
0
HS_106
AGCTGGTGTTTGTGAATC
human
HS_106
ILMN_3167213
HS_107
ILMN_3167213
0
HS_107
CCACTGATCTCGGTCGA
human
HS_107
ILMN_3167057
HS_108.1
ILMN_3167057
0
HS_108.1
TGAGGTAGTAGGTGGTGTG
human
HS_108.1
ILMN_3168313
HS_109
ILMN_3168313
0
HS_109
TCTCCAGCTGGGACCCT
human
HS_109
ILMN_3166972
HS_11.1
ILMN_3166972
0
HS_11.1
TACACTGACGGAGCCAG
human
HS_11.1
ILMN_3168149
HS_110
ILMN_3168149
0
HS_110
CTCTGTGCTGTGCGTAGT
human
HS_110
ILMN_3168527
HS_111
ILMN_3168527
0
HS_111
AGGGTGGAGGTTGGCGGG
human
HS_111
ILMN_3167562
HS_112
ILMN_3167562
0
HS_112
AGTCCTCCGGCCCTTCCTCCC
human
HS_112
ILMN_3168099
HS_113
ILMN_3168099
0
HS_113
TAGCCCCCAGGCTTCAC
human
HS_113
ILMN_3168017
HS_114
ILMN_3168017
0
HS_114
GGCGAGGAGGCCCTTTA
human
HS_114
ILMN_3167545
HS_115
ILMN_3167545
0
HS_115
AATGTGGAAGTGGTCTGA
human
HS_115
ILMN_3167951
HS_116
ILMN_3167951
0
HS_116
TCTGGGCTGCGGGCCTGGGAA
human
HS_116
ILMN_3167172
HS_117
ILMN_3167172
0
HS_117
CCGCACCAAGAGGCCGCC
human
HS_117
ILMN_3167994
HS_119
ILMN_3167994
0
HS_119
GGGAGGACAAAGGACTG
human
HS_119
1145 111 Kbytes .Supplementary data files not provided
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