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Platform GPL14821 Query DataSets for GPL14821
Status Public on Nov 02, 2011
Title Jiang lab Clostridium acetobutylicum ATCC 824 agilent 8×15K one-color v1
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Clostridium acetobutylicum
Manufacturer Agilent Technologies
Manufacture protocol see Agilent Technologies's website for details (www.genomics.agilent.com)
Support glass
 
 
Web link http://www.genomics.agilent.com
Contributor(s) Ren C, Gu Y, Hu S, Wu Y, Yang S, Jiang W
Submission date Nov 01, 2011
Last update date Nov 02, 2011
Contact name Cong Ren
E-mail(s) rencong@sibs.ac.cn
Organization name Institute of Plant Physiology and Ecology, SIBS, CAS.
Street address 300 Feng Lin Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Samples (8) GSM825160, GSM825161, GSM825162, GSM825163, GSM825164, GSM825165 
Series (1)
GSE33364 CcpA, a Pleiotropic Key Regulator in Butanol-producing Clostridium acetobutylicum ATCC 824

Data table header descriptions
ID
SEQUENCE Probe sequence
ORF Locus tag
Locus Gene symbol
COGs COG number
DESCRIPTION function annotation

Data table
ID SEQUENCE ORF Locus COGs DESCRIPTION
CUST_1_PI416587202 ACTCTCCAGTGATAGACCACCTAAGGAAATACCTACATTGGAGGATAGGTTGCGTTCAAG CA_C0001 dnaA COG0593L chromosomal replication initiation protein
CUST_2_PI416587202 TGTGGCTAGAAAAGAAGAATTGTTAGACTGCATAGAGAGAGCTTCACTTATGGCTAAGGA CA_C0002 dnaN COG0592L DNA polymerase III subunit beta
CUST_3_PI416587202 AGTTGGATTCTTTACTCAAATGGTGTGGAGCAGTCACTCTAGGTTCTGAAGCAAAAATGT CA_C0003 - COG2501S Small conserved protein, ortholog of YAAA B.subtilis
CUST_4_PI416587202 TGGAATAGACGCTAGAAGCTTTGGTTCACAAGGACAGCAAAGAACATCTGTTTTAACAAT CA_C0004 recF COG1195L recombination protein F
CUST_5_PI416587202 TGAGGATGTCAGAAGAGGATGGATTTGTTGAAAGAATAACAAATGAGGCTCCTAAATCCT CA_C0005 - - Uncharacterized small conserved protein, ortholog of YAAB B.subtilis
CUST_6_PI416587202 CGAAATATATATCGTTGAGGGAGACTCAGCGGGAGGTTCTGCAAAGCAAGGAAGAAATAG CA_C0006 gyrB COG0187L DNA gyrase subunit B
CUST_7_PI416587202 AGCCTATCAGATACCAGAGGCTGGAAGAGCAGCAAAGGGAACAAATGTTGTTAACTTATT CA_C0007 gyrA COG0188L DNA gyrase subunit A
CUST_8_PI416587202 TGTTGCAAGAGATGTTGAGAAGATATGTAATCAAAAAGATATAATAAAAGCGGCGCTTTT CA_C0008 - COG4341R Predicted HD superfamily hydrolase
CUST_9_PI416587202 TGAGCCTATTAAGGGAAGTACCCTAGCAAGAGAATTAGGTGTGACAAGACAAGTGATTGT CA_C0009 - COG1827R Uncharacterized conserved protein, ortholog of YRXA B.subtilis
CUST_10_PI416587202 AAAGCAGGCTCAGGATTTATATAATCAGGCTGTTGATGCTCAAAAGAATGGCGATTGGTC CA_C0010 - COG1615S hypothetical protein CAC0010
CUST_11_PI416587202 AACCTATTAAATGTTCAACAGGCATTAAAGGCGATGAATACAAAGAGACACCAATGGGGA CA_C0011 - COG1376S Uncharacterized conserved of ErfK family
CUST_12_PI416587202 ATTGTATGTGCTGATGATTTGGCCTTAGCTTATGGAGAAGTAGCCTTTGATAATGGTGTT CA_C0012 - COG0579R Predicted dehydrogenase with iron-sulfur domain
CUST_13_PI416587202 ACCCTTGTAAGAATAAAGGGTTCATCTGGAGAAGTTGTTCCTGTCAAAAGTAGAGAACCA CA_C0013 - COG3862S Uncharacterized small conserved protein, ortholog of T.maritima (4981999) and P.abyssi (5457704)
CUST_14_PI416587202 GTATAACATCATCTCAGAAAGCACTTGGACTACCTCCAGGATTGGCAGCATGTTCATTCT CA_C0014 - COG0075E Aminotransferase
CUST_15_PI416587202 TGCTAGCAGTGCTTCAGTAGCAGAACTAGCCATAGGACATATGTTTGCAGTTTCAAGATT CA_C0015 serA COG0111HE D-3-phosphoglycerate dehydrogenase
CUST_16_PI416587202 GAAATAGATGCCCTATATATTGCCGATGGTCATCATAGAGCGGCATCAGCAGTAAAGGTT CA_C0016 - COG4198S Related to HTH domain of SpoOJ/ParA/ParB/repB family, involved in chromosome partitioning
CUST_17_PI416587202 CTTAAATGCTTCAGGGCTTGCAACAAGTAGAGTACTTCCAGCAATACTTGAGCAAATGCA CA_C0017 serS COG0172J seryl-tRNA synthetase
CUST_18_PI416587202 ATGGGCAAACATGATTACTTTTATTTATCCTGTATGGTGGGCTGGACTACCAGCTATGCT CA_C0018 - COG2249R Putative NADPH-quinone reductase, YabF family
CUST_19_PI416587202 ACAACAGCAGACATAGCAAAGGCAGCTGGTCTTTCTACTGGAACTGTTTATGCATATTTT CA_C0019 - COG1309K Transcriptional regulator, AcrR family
CUST_20_PI416587202 TCGTCAGGAGAGGAAGTAAAACAAGGAGCAGAAAAAGTTTCAGGAGGAACTTCAAAGGTT CA_C0020 - COG0477GEPR, COG1511S MDR-type permease

Total number of rows: 3848

Table truncated, full table size 533 Kbytes.




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