GEO help: Mouse over screen elements for information.
Status
Public on Feb 01, 2012
Title
NimbleGen_mouse(MM9)_Hox plus array [Design_ID:11926]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
nimblegen
Manufacture protocol
See manufacturer's website at http://www.nimblegen.com/
Description
DESIGN_ID : 11926
Submission date
Nov 29, 2011
Last update date
Feb 01, 2012
Contact name
Graeme Richard Grimes
E-mail(s)
graeme.grimes@ed.ac.uk Organization name
University of Edinburgh, The Institute of Genetics and Cancer
Department
Human Genetics Unit
Lab
Bioinformatics Analysis Core
Street address
Western General Hospital, Crewe Road
City
Edinburgh
ZIP/Postal code
EH4 2XU
Country
United Kingdom
Samples (39)
GSM840178 , GSM840179 , GSM840180 , GSM840181 , GSM840182 , GSM840183
GSM840184 ,
GSM840185 ,
GSM840186 ,
GSM840187 ,
GSM840188 ,
GSM840189 ,
GSM840190 ,
GSM908268 ,
GSM908269 ,
GSM908270 ,
GSM908271 ,
GSM908272 ,
GSM908273 ,
GSM908274 ,
GSM908275 ,
GSM908276 ,
GSM908277 ,
GSM944564 ,
GSM944565 ,
GSM944566 ,
GSM944567 ,
GSM944568 ,
GSM944569 ,
GSM944570 ,
GSM944571 ,
GSM944572 ,
GSM944573 ,
GSM944574 ,
GSM944575 ,
GSM944576 ,
GSM944577 ,
GSM944578 ,
GSM944579 Series (3)
GSE33997 Chip-chip from Mouse E11.5 distal limb tissue cells for Gabpa, Ets1, Elf1, Etv4, Etv5 antibody
GSE36999 Chip-chip from WT and Polycomb Component Knock Out Mouse ES cells for H2AZ, H3K27me3, EZH2 and Ring1B.
GSE38526 Chip-chip from Mouse E10.5 anterior and posterior immortalised limb cell lines and limb tissue for H3K27me3 antibody and from Mouse E10.5 anterior and posterior limb tissue for Ring1B antibody.
Data table header descriptions ID SEQUENCE Probe oligonucleotide sequence
CHROMOSOME Chromosome number
RANGE_GB RefSeq accession.version of chromosome (NCBI Build 37, UCSC mm9)
RANGE_START Start coordinate of oligo (relative to RANGE_GB)
LENGTH
Data table ID SEQUENCE CHROMOSOME RANGE_GB RANGE_START LENGTH CHR01FS136453759
GCAAGGGGAAGCGTCTTCTGAGGGGCGGGGGAGCGGTTGCCTTTAAGTAG
1
NC_000067.5
136453759
50
CHR01FS136453804
AGTAGAGATCCCTCTCAGGCCCTAGGTTCTCTTGACTAGGTTGGCAACCG
1
NC_000067.5
136453804
50
CHR01FS136453849
AACCGCCGACTCCCTCAGCGTCTCTCTGGGTTGATCTGTAGCATCTCATC
1
NC_000067.5
136453849
50
CHR01FS136453884
CTGTAGCATCTCATCATTTAGGATCACTACCAGAAATGGAGGAAGCAGCA
1
NC_000067.5
136453884
50
CHR01FS136453929
CAGCACTAGTAGACCTTGAAAGTTGGGAGAGAAGATGACTAGGTCATAGT
1
NC_000067.5
136453929
50
CHR01FS136453989
ACTTCCTAAGTTCGTACCTTCCAGTTACATACCCACAATTCATGTCCAGAG
1
NC_000067.5
136453989
51
CHR01FS136454034
CCAGAGGTCTGAAAATTATAACCTACTTGGTTTGTAGGATGCTAACGTCAAAGG
1
NC_000067.5
136454034
54
CHR01FS136454069
AGGATGCTAACGTCAAAGGTGAAAGTACTGTCCTTTCCCAAAGCAGAGAA
1
NC_000067.5
136454069
50
CHR01FS136454114
GAGAACATGACAGAAAGTCAACTCCAGGAAGACCCCCAAACACACACAAC
1
NC_000067.5
136454114
50
CHR01FS136454159
ACAACGTTTATAACATCCAGGGTCAGGGCCAAGAGCGAAAATAAAGGATTTT
1
NC_000067.5
136454159
52
CHR01FS136454219
TCAGTCAATATGACAGGTCATCTGAAATCTTAGCCTTTGGGAATGAGGTCAG
1
NC_000067.5
136454219
52
CHR01FS136454289
TTCCAGGCCAGCTTTGGCTACAAGTATGCAATCCCATTTCAATTTTTCCC
1
NC_000067.5
136454289
50
CHR01FS136454339
CCTCAATACATTATCACGGAAAAAAAAATCAGCAAGGTTTAAAAATATGTCAAGC
1
NC_000067.5
136454339
55
CHR01FS136454414
TAATCCTAGCACCTCCGAGTTAGAAGCCAGCCAATATGTGAGTTTCAGGC
1
NC_000067.5
136454414
50
CHR01FS136454474
TACATAGTGAAACCTTGACTCAAAAATGTGGTAAATTCTATACTTCTTCCCTAGG
1
NC_000067.5
136454474
55
CHR01FS136454519
CTTCCCTAGGTTTCCCACGATTTTATAACCTGCTGTATCACCTCATTTTACAATGA
1
NC_000067.5
136454519
56
CHR01FS136454579
TTTTTAATGAACAGATTATTGTCTAAGACAATATTATTGTCTTATTTTATTATTAT
1
NC_000067.5
136454579
56
CHR01FS136454629
TATTATTTAAGACAATATATGTCTTATTCAGGCTCCAAATCCCTGTAGAGCTAAGAAAA
1
NC_000067.5
136454629
59
CHR01FS136454674
TAGAGCTAAGAAAAGTTTTGCCTTCTTCAAGAATTGCTGAACTGTTTTAGAGGCCAG
1
NC_000067.5
136454674
57
CHR01FS136454709
GCTGAACTGTTTTAGAGGCCAGGTACTTCGATAGAGCTTATTAAAGACTGG
1
NC_000067.5
136454709
51
179493 17153 Kbytes .Supplementary file Size Download File type/resource GPL14936_100428_PM_MM9_Hox_plus_ChIP.ndf.gz
41.4 Mb
(ftp) (http) NDF
GPL14936_100428_PM_MM9_Hox_plus_ChIP.pos.gz
1.4 Mb
(ftp) (http) POS
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