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Status
Public on Sep 05, 2012
Title
Exiqon miRCURY LNA microRNA array; 7th generation; batch 208500-2, 208510; lot 35004 - hsa, mmu & rno (miRBase 18.0)
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organisms
Homo sapiens ; Mus musculus ; Rattus norvegicus ; Human alphaherpesvirus 1 ; Human alphaherpesvirus 2 ; Cytomegalovirus ; Human betaherpesvirus 5 ; Lymphocryptovirus ; Rhadinovirus ; JC polyomavirus ; Human immunodeficiency virus 1 ; Murid gammaherpesvirus 4 ; Merkel cell polyomavirus ; Betapolyomavirus hominis ; Betapolyomavirus macacae Manufacturer
Exiqon
Manufacture protocol
See manufacturer's website: http://www.exiqon.com
Catalog number
208500,208501,208502,208510
Support
glass
Description
The 7th generation miRCURY locked nucleic acid (LNA) oligonucleotide microarray is manufactured by Exiqon (Vedbaek, Denmark). The array has probes printed in quadruplicate as 100 um-diameter spots with 185 um inter-spot distance. Many spots on the array do not have a probe ('empty') and there are some spots that only have the Hy3 fluorescent dye ('Hy3'). Some probes on the array target multiple mature microRNAs. Some probes are species-specific; others are not. Some probes are specific for certain synthetic small RNAs used as control spike-ins in the array-use protocol provided by the array manufacturer. Some probes target non-microRNA RNAs like small nucleolar RNAs. IDs and names of probes on the array, and the miRBase (version 18.0) or proprietary Exiqon miRPlus accession numbers of mature microRNAs targeted by the probes, are provided in the data table for this Platform. The platform information here is based on the .gal array layout file for array batch numbers 208500-2 & 208510 and lot number 35004.
Web link
http://www.exiqon.com/SEEEMS/26.asp Contributor(s)
Patnaik SK Submission date
Sep 04, 2012
Last update date
Nov 20, 2012
Contact name
Santosh Kumar Patnaik
Phone
716-8458364
Organization name
Roswell Park Comprehensive Cancer Center
Department
Thoracic Surgery
Street address
Elm and Carlton Streets
City
Buffalo
State/province
NY
ZIP/Postal code
14263
Country
USA
Samples (213)
GSM1000223 , GSM1000224 , GSM1000225 , GSM1000226 , GSM1000227 , GSM1000228
GSM1000229 ,
GSM1000230 ,
GSM1000231 ,
GSM1000232 ,
GSM1000233 ,
GSM1000234 ,
GSM1000235 ,
GSM1000236 ,
GSM1000237 ,
GSM1000238 ,
GSM1000239 ,
GSM1000240 ,
GSM1000241 ,
GSM1000242 ,
GSM1000243 ,
GSM1000244 ,
GSM1000245 ,
GSM1000246 ,
GSM1000247 ,
GSM1000248 ,
GSM1000249 ,
GSM1000250 ,
GSM1000251 ,
GSM1000252 ,
GSM1000253 ,
GSM1000254 ,
GSM1000255 ,
GSM1000256 ,
GSM1000257 ,
GSM1000258 ,
GSM1000259 ,
GSM1000260 ,
GSM1000261 ,
GSM1000262 ,
GSM1000263 ,
GSM1000264 ,
GSM1000265 ,
GSM1000266 ,
GSM1000267 ,
GSM1000268 ,
GSM1000269 ,
GSM1000270 ,
GSM1000271 ,
GSM1000272 ,
GSM1000273 ,
GSM1000274 ,
GSM1000275 ,
GSM1000276 ,
GSM1000277 ,
GSM1000278 ,
GSM1000279 ,
GSM1000280 ,
GSM1000281 ,
GSM1000282 ,
GSM1000283 ,
GSM1000284 ,
GSM1000285 ,
GSM1000286 ,
GSM1000287 ,
GSM1000288 ,
GSM1000289 ,
GSM1000290 ,
GSM1000291 ,
GSM1000292 ,
GSM1000293 ,
GSM1000294 ,
GSM1000295 ,
GSM1000296 ,
GSM1000297 ,
GSM1000298 ,
GSM1000299 ,
GSM1000300 ,
GSM1000301 ,
GSM1000302 ,
GSM1000303 ,
GSM1000304 ,
GSM1000305 ,
GSM1000306 ,
GSM1000307 ,
GSM1000308 ,
GSM1000309 ,
GSM1000310 ,
GSM1000311 ,
GSM1000312 ,
GSM1000313 ,
GSM1000314 ,
GSM1000315 ,
GSM1000316 ,
GSM1000317 ,
GSM1000318 ,
GSM1000319 ,
GSM1000320 ,
GSM1000321 ,
GSM1000322 ,
GSM1000323 ,
GSM1000324 ,
GSM1000325 ,
GSM1000326 ,
GSM1000327 ,
GSM1000328 ,
GSM1000329 ,
GSM1000330 ,
GSM1000331 ,
GSM1000332 ,
GSM1000333 ,
GSM1000334 ,
GSM1000335 ,
GSM1000336 ,
GSM1000337 ,
GSM1000338 ,
GSM1000339 ,
GSM1000340 ,
GSM1000341 ,
GSM1000342 ,
GSM1000343 ,
GSM1000344 ,
GSM1000345 ,
GSM1000346 ,
GSM1000347 ,
GSM1000348 ,
GSM1000349 ,
GSM1000350 ,
GSM1000351 ,
GSM1000352 ,
GSM1000353 ,
GSM1000354 ,
GSM1000355 ,
GSM1000356 ,
GSM1000357 ,
GSM1000358 ,
GSM1000359 ,
GSM1000360 ,
GSM1000361 ,
GSM1000362 ,
GSM1000363 ,
GSM1000364 ,
GSM1000365 ,
GSM1000366 ,
GSM1000367 ,
GSM1000368 ,
GSM1000369 ,
GSM1000370 ,
GSM1000371 ,
GSM1000372 ,
GSM1000373 ,
GSM1000374 ,
GSM1000375 ,
GSM1000376 ,
GSM1000377 ,
GSM1000378 ,
GSM1000379 ,
GSM1000380 ,
GSM1000381 ,
GSM1000382 ,
GSM1000383 ,
GSM1000384 ,
GSM1000385 ,
GSM1000386 ,
GSM1000387 ,
GSM1000388 ,
GSM1000389 ,
GSM1000390 ,
GSM1000391 ,
GSM1000392 ,
GSM1000393 ,
GSM1000394 ,
GSM1000395 ,
GSM1000396 ,
GSM1000397 ,
GSM1000398 ,
GSM1000399 ,
GSM1319258 ,
GSM1319259 ,
GSM1319260 ,
GSM1319261 ,
GSM1319262 ,
GSM1319263 ,
GSM1319264 ,
GSM1319265 ,
GSM1319266 ,
GSM1319267 ,
GSM1319268 ,
GSM1319269 ,
GSM1319270 ,
GSM1319271 ,
GSM1319272 ,
GSM1319273 ,
GSM1319274 ,
GSM1319275 ,
GSM1319276 ,
GSM1319277 ,
GSM1319278 ,
GSM1319279 ,
GSM1319280 ,
GSM1319281 ,
GSM1319282 ,
GSM1319283 ,
GSM1319284 ,
GSM1319285 ,
GSM1319286 ,
GSM1319287 ,
GSM1541923 ,
GSM1541924 ,
GSM1541925 ,
GSM1541926 ,
GSM2027562 ,
GSM2027563 Series (5)
GSE40738 Whole blood microRNA expression in human lung cancer
GSE54578 miRNA expression in blood of 15 schizophrenia patients and 15 healthy controls
GSE54914 Expression in blood of schizophrenia patients and healthy controls
GSE63135 Altered levels of circulating miRNAs are associated with Schistosoma japonicum infection in mice
GSE76527 microRNA profiles of nasopharyngeal carcinoma cell line and nasopharyngeal epithelial cell line
Data table header descriptions ID Name Name of probe typically indicating the RNA sequences targeted by it
miRNA_ID_LIST Identity of the mature microRNA targeted by a probe; if a probe targets multiple mature microRNAs, then the IDs are separated by commas
Database Database whose record IDs are used for the miRNA_ID_LIST value
SPOT_ID Identifier to designate a control probe or an empty feature
3548 188 Kbytes .Supplementary file Size Download File type/resource GPL16016_208500_208501_208502_208510_lot35004_35004_hsa_mmu_rno_and_related_vira_from_mb180_miRPlus.gal.gz
96.6 Kb
(ftp) (http) GAL
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