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Platform GPL17271 Query DataSets for GPL17271
Status Public on Jul 26, 2013
Title FZ_IBG-1_Goxydans_10K_Ver1
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Gluconobacter oxydans 621H
Manufacturer Operon (Cologne, Germany) and Microarrays Inc. (Huntsville, USA)
Manufacture protocol spotted with 70-mer oligonucleotides obtained from Operon (Cologne, Germany)
 
Description G.oxydans 621H, based on the genome sequence entry NC_006677
 
Submission date Jun 10, 2013
Last update date Jul 26, 2013
Contact name Tino Polen
E-mail(s) t.polen@fz-juelich.de
Organization name Forschungszentrum Jülich GmbH
Department IBG-1: Biotechnology
Street address Leo Brandt Str.
City Juelich
State/province NRW
ZIP/Postal code 52425
Country Germany
 
Samples (3) GSM1159655, GSM1159656, GSM1159657
Series (1)
GSE47782 Evidence for a key role of cytochrome bo3 oxidase in respiratory energy metabolism of Gluconobacter oxydans

Data table header descriptions
ID
Block GenePix GAL spot position Block coordinate
Column GenePix GAL spot position Column coordinate
Row GenePix GAL spot position Row coordinate
Name Spot Name (gene or control name)
ORF ORF Name
SEQUENCE Oligonucleotide DNA Sequence
Annotation Gene or Oligo Annotation
SPOT_ID spot id

Data table
ID Block Column Row Name ORF SEQUENCE Annotation SPOT_ID
1 1 1 1 GOX0820 GOX0820 AGGCTCTTGAAGCACAGGTTGCGGAACTCAAGGACCGCTGGGTCCGTTCCGAAGC GrpE protein (HSP-70 cofactor)
2 1 2 1 GOX0168 GOX0168 TGGAAAAACTGCGGAGCTGGGGGTTCACGGTCAATCCGCTCTCCCAGATGATTGCCCATGC NAD-dependent DNA ligase
3 1 3 1 GOX2030 GOX2030 GCGGTACCAGCGATTTCTCGGTCATGCGTTTTGATCCGCATGGAAGCCAGCGTGTCACAACG Chaperone protein DnaK
4 1 4 1 GOX1564 GOX1564 TGAGCACAGACAATAACCCGCTCAGCATCACCTATTCCGACGGTAACACCTATATTGGCGTCTGCTTC hypothetical protein GOX1564
5 1 5 1 GOX1451 GOX1451 CAAAATCATCCGCGTCATGCGGAAGTTCGATGAAACAGCGCCCCACTCCGTTCTCTTGGTTCTGGACGC Cell division protein FtsY-like protein
6 1 6 1 GOX0702 GOX0702 GGATGCGATCCGCGGGCTGGATACGGGTGCGGACGACTATCTGATGAAGCCATGCAG Phosphate regulon response regulator PhoB
7 1 7 1 GOX0455 GOX0455 AGGCCGGCGTTTTTCTTTCCGAGATCCAGACCTTCGAGCCTGCGATCCACGAGCATGTCG Mannose-6-phosphate isomerase
8 1 8 1 GOX0827 GOX0827 TCCACTTCTGGCGGCTGCTCTGGCTTTTTCTCTCATCGCCCTGTCCGGAACAGGCGTATTTTCCAC hypothetical protein GOX0827
9 1 9 1 GOX1919 GOX1919 TGAGGGAGGGACTGCTTAGGAGAGAGATCATGCCTCAGGCTACCAATGATCAGATGCTCAACCTTCTGTG Transcriptional regulator
10 1 10 1 GOX0400 GOX0400 GTGATCATCCTCGGATCAGTCTCATCCGGCGCTGAGATCGTGGCCGCGGGGTCCATTCACGTATAC septum formation inhibitor
11 1 11 1 GOX2428 GOX2428 ATCGCATTGTCGAGGCCGTCTTCGAGGCGTCTGGCAATCAGATCGCCTGGTCCTC hypothetical protein GOX2428
12 1 12 1 GOX0410 GOX0410 ATGCCGAGACCTTTGTCCTGGGCAAGAAGGCCGTTTCGGGGGATGCGACCCTGTTCAATTC leucyl-tRNA synthetase
13 1 13 1 GOX2497 GOX2497 CGAGCTTCGCATCATCGTCATGAATGCGGGCACCGAACCCTTCACTGTCGAGCGTGG Deoxyuridine 5'-triphosphate nucleotidohydrolase
14 1 14 1 GOX0063 GOX0063 TCGAACCGTCCAGTCTGACTGCTGTCCTGAAGCCACTGGAAGATCCCACGTTCGATATCGGAACACTGGC 3-deoxy-manno-octulosonate cytidylyltransferase
15 1 15 1 GOX2076 GOX2076 GTCCGACAGGATGGACGCTTATGCCGTTGTCAGGCTCGTGGAAGGAACACCAGCCCTGAGGGATATG Putative transcriptional regulator
16 1 16 1 GOX1539 GOX1539 ATTTCTGGCCATCTGCTGCAGAGGGAGAGAACGATCACTCCTCAAAAGGGGACGTCATCATTGG Putative acetyltransferase
17 1 17 1 GOX1906 GOX1906 CGTCGCAGATCATGGGCGCCATCCTTGTTTTCAGACTTTTCTATTACATCATTCCGCTGCTTCTCGCCGG hypothetical protein GOX1906
18 1 18 1 GOX1079 GOX1079 GGGTATATTGCGTCGGTCTGCAGACCATGCGAGAAGCCGACAGGGTTTGTCCCCCGTCTTTTTCCAGTC hypothetical protein GOX1079
19 1 1 2 GOX1114 GOX1114 AACCATCGCATCCTCGGTCTGCGCTACCGAAGAGGGACGGCATTTCTGCCCGATTGAAACCGGATTTTC Vitamin B12-dependent ribonucleotide reductase
20 1 2 2 GOX0815 GOX0815 GGATGAGGCAGTGGTGCAGTATGTGAAGTCGGACCCGGCCTATCCCGCATTTTTC hypothetical protein GOX0815

Total number of rows: 8640

Table truncated, full table size 1050 Kbytes.




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