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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 12, 2013 |
| Title |
Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Escherichia coli str. K-12 substr. MG1655 |
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| Submission date |
Jul 12, 2013 |
| Last update date |
Jul 12, 2013 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (238)
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GSM1185369, GSM1185370, GSM1185371, GSM1185372, GSM1185373, GSM1185374
GSM1185375, GSM1185376, GSM1185377, GSM1314494, GSM1314495, GSM1314496, GSM1314497, GSM1314498, GSM1314499, GSM1314500, GSM1314501, GSM1314502, GSM1314503, GSM1314504, GSM1314505, GSM1314506, GSM1314507, GSM1314508, GSM1314509, GSM1314510, GSM1314511, GSM1314512, GSM1314513, GSM1314514, GSM1314515, GSM1326335, GSM1326336, GSM1326337, GSM1326338, GSM1326339, GSM1326340, GSM1326341, GSM1326342, GSM1326343, GSM1326344, GSM1326345, GSM1326346, GSM1326347, GSM1326348, GSM1326349, GSM1326350, GSM1326351, GSM1326352, GSM1326353, GSM1326354, GSM1326355, GSM1326356, GSM1326357, GSM1326358, GSM1326359, GSM1326360, GSM1326361, GSM1326362, GSM1326363, GSM1326364, GSM1326365, GSM1326366, GSM1326367, GSM1326368, GSM1326369, GSM1326370, GSM1326371, GSM1326372, GSM1326373, GSM1326374, GSM1326375, GSM1326376, GSM1326377, GSM1326378, GSM1326379, GSM1326380, GSM1326381, GSM1326382, GSM1326383, GSM1326384, GSM1326385, GSM1326386, GSM1326399, GSM1326400, GSM1326401, GSM1326402, GSM1326403, GSM1326404, GSM1326405, GSM1326406, GSM1436049, GSM1436050, GSM1436051, GSM1436052, GSM1436053, GSM1436054, GSM1436055, GSM1436056, GSM1436057, GSM1436058, GSM1482120, GSM1482121, GSM1484346, GSM1484347, GSM1484348, GSM1484349, GSM1484350, GSM1484351, GSM1484352, GSM1484353, GSM1484354, GSM1484355, GSM1484356, GSM1484357, GSM1484358, GSM1484359, GSM1502438, GSM1502439, GSM1502440, GSM1502441, GSM1502442, GSM1502443, GSM1502444, GSM1502445, GSM1502446, GSM1502447, GSM1502448, GSM1558530, GSM1558531, GSM1622463, GSM1622464, GSM1622465, GSM1622466, GSM1622467, GSM1622468, GSM1633277, GSM1633278, GSM1642593, GSM1642594, GSM1651896, GSM1651897, GSM1651898, GSM1651899, GSM1849958, GSM1849959, GSM1849960, GSM1849961, GSM2356685, GSM2356686, GSM2356687, GSM2356688, GSM2356689, GSM2356690, GSM2723765, GSM2723766, GSM2801051, GSM2801052, GSM2801053, GSM2801054, GSM2801055, GSM2946865, GSM2946866, GSM2946867, GSM2946868, GSM2946869, GSM2946870, GSM2946871, GSM3154484, GSM3154485, GSM3154486, GSM3154487, GSM3154488, GSM3154489, GSM3154490, GSM3154491, GSM3430976, GSM3430977, GSM3461156, GSM3461157, GSM3461164, GSM3461165, GSM3703939, GSM3703940, GSM3703941, GSM3703942, GSM3863779, GSM3863780, GSM3863781, GSM3863783, GSM3863784, GSM3863785, GSM3863787, GSM3863788, GSM3863789, GSM3863790, GSM5033092, GSM5033093, GSM5033094, GSM5033097, GSM5033098, GSM5033099, GSM5257521, GSM5257522, GSM5257524, GSM5257525, GSM5257526, GSM5257528, GSM5257529, GSM5257530, GSM5257532, GSM5257533, GSM5257534, GSM5257536, GSM5386939, GSM5386940, GSM5386941, GSM5386942, GSM5386943, GSM5386944, GSM5386945, GSM5386946, GSM5386947, GSM5386948, GSM5386949, GSM5386950, GSM6918912, GSM6918913, GSM6918914, GSM6918915, GSM6918916, GSM6918917, GSM6918918, GSM6918919, GSM6918920, GSM6918921, GSM6918922, GSM6918923
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| Series (43)
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| GSE48829 |
Escherichia coli RNA-Seq |
| GSE48832 |
Expression from Escherichia coli |
| GSE54403 |
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-exo] |
| GSE54404 |
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-seq] |
| GSE54405 |
In vivo organization of bacterial transcription initiation complexes at a genome-scale [RNA-seq] |
| GSE54406 |
In vivo organization of bacterial transcription initiation complexes at a genome-scale [TSS-seq] |
| GSE54407 |
In vivo organization of bacterial transcription initiation complexes at a genome-scale |
| GSE54899 |
Deciphering the Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli [ChIP-Seq] |
| GSE54900 |
Deciphering the Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli [RNA-seq] |
| GSE54901 |
Deciphering the Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli |
| GSE54902 |
Elucidating transcriptional regulation of nitrogen metabolism with systems approaches [ChIP-Seq] |
| GSE54904 |
Elucidating transcriptional regulation of nitrogen metabolism with systems approaches [RNA-Seq] |
| GSE54905 |
Elucidating transcriptional regulation of nitrogen metabolism with systems approaches |
| GSE59377 |
Global Rebalancing of Cellular Resources by Pleiotropic Point Mutations Illustrates a Multi-scale Mechanism of Adaptive Evolution |
| GSE60546 |
In vivo probing of the DNA-binding Architecture by bacterial arginine repressor |
| GSE60667 |
In vivo probing of promoter overlapping between σ-factors in Escherichia coli (ChIP-exo) |
| GSE60668 |
In vivo probing of promoter overlapping between σ-factors in Escherichia coli (ChIP-Seq) |
| GSE60669 |
In vivo probing of promoter overlapping between ?-factors in Escherichia coli |
| GSE61327 |
Expression Profiling E. Coli Evolved on Glucose Minimal Media |
| GSE63858 |
Ribosome profiling of E. coli K-12 MG1655 MOPS rich media with 0.2% glucose |
| GSE66441 |
Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli [ChIP-seq] |
| GSE66482 |
Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli |
| GSE67218 |
Transcriptional expression level of E. coli at 37 ℃ in LB media |
| GSE67605 |
MS2-affinity purification coupled with RNA sequencing (MAPS) reveals DsrA sRNA targetome |
| GSE67606 |
Identification of RNAs bound to MS2 aptamer using MS2-affinity purification coupled with RNA sequencing (MAPS) |
| GSE67607 |
DsrA regulatory RNA represses both hns and rbsD mRNAs through distinct mechanisms in Escherichia coli |
| GSE72020 |
Proteome allocation constraints determine cellular growth rates and demand fitness trade-offs |
| GSE88979 |
Revealing the genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles and unexpected importance of narU under osmotic stress in Escherichia coli K-12 MG1655 [ChIP-exo] |
| GSE88980 |
Revealing the genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles and unexpected importance of narU under osmotic stress in Escherichia coli K-12 MG1655 [RNA-seq] |
| GSE88981 |
Revealing the genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles and unexpected importance of narU under osmotic stress in Escherichia coli K-12 MG1655 |
| GSE102091 |
The Nucleoid Protein Dps Binds Genomic DNA of Escherichia coli in a Non-random Manner |
| GSE103421 |
A stress response that monitors and regulates mRNA structure is central to cold-shock adaptation |
| GSE114917 |
Genetic response of E.coli to mild elevated pressure |
| GSE119965 |
Experimental promoter identification of a representative food-borne pathogen Salmonella enterica serovar Typhimurium LT2 with near single base-pair resolution |
| GSE119967 |
Experimental promoter identification of a representative food-borne pathogen Salmonella enterica serovar Typhimurium LT2 with near single base-pair resolution |
| GSE122211 |
Expression profiling of E. coli K-12 MG1655 |
| GSE129281 |
rG4-seq for P. aeruginosa and E. coli |
| GSE132442 |
Evolution of Escherichia coli to 42 °C and Subsequent Genetic Engineering Reveals Adaptive Mechanisms and Novel Mutations |
| GSE165421 |
Testing the impact of Type I Restriction Modification Systems on Gene Expression in Uropathogenic Escherichia coli |
| GSE172467 |
DNA compaction by a novel viral-encoded protein globally dysregulates host gene expression. |
| GSE178278 |
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration |
| GSE178281 |
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration |
| GSE222248 |
The E. coli pathobiont LF82 encodes a unique variant of sigma 70 that results in global gene expression changes and altered phenotypes |
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| Supplementary data files not provided |
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