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Platform GPL18562 Query DataSets for GPL18562
Status Public on Sep 30, 2014
Title Culex quinquefasciatus
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Culex quinquefasciatus
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description NimbleGen design name 110120_Cmosq_BH_exp, NimbleGen design ID 547751. A 12-plex 135K feature expression design (Expr12x135K) for 18,692 protein coding genes from Culex quinquefasciatus based on the CpipJ1.2 geneset in Vectorbase using an average of 3 60-mer probes per transcript, with each transcript/probe duplicated on the array. Probes representing 124 non-coding RNAs were also included on the array. The design includes random GC and other control probes.
 
Submission date Apr 10, 2014
Last update date Sep 30, 2014
Contact name David W Severson
Organization name University of Notre Dame
Department Biological Sciences
Lab David W Severson
Street address 44 Galvin Life Sciences
City Notre Dame
State/province IN
ZIP/Postal code 46556
Country USA
 
Samples (48) GSM1367577, GSM1367578, GSM1367579, GSM1367580, GSM1367581, GSM1367582 
Series (1)
GSE56722 Whole transcriptome responses among females of the filariasis and arbovirus vector mosquito Culex pipiens implicate TGF-β signaling and chromatin modification as key drivers of diapause induction

Data table header descriptions
ID
SPOT_ID Vectorbase Gene ID

Data table
ID SPOT_ID
CPIJ000002_RA CPIJ000002
CPIJ000003_RA CPIJ000003
CPIJ000004_RA CPIJ000004
CPIJ000005_RA CPIJ000005
CPIJ000006_RA CPIJ000006
CPIJ000007_RA CPIJ000007
CPIJ000008_RA CPIJ000008
CPIJ000009_RA CPIJ000009
CPIJ000010_RA CPIJ000010
CPIJ000011_RA CPIJ000011
CPIJ000012_RA CPIJ000012
CPIJ000013_RA CPIJ000013
CPIJ000014_RA CPIJ000014
CPIJ000015_RA CPIJ000015
CPIJ000016_RA CPIJ000016
CPIJ000017_RA CPIJ000017
CPIJ000019_RA CPIJ000019
CPIJ000020_RA CPIJ000020
CPIJ000021_RA CPIJ000021
CPIJ000022_RA CPIJ000022

Total number of rows: 16313

Table truncated, full table size 398 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL18562_110120_Cmosq_BH_exp.ndf.gz 7.8 Mb (ftp)(http) NDF
GPL18562_110120_Cmosq_BH_exp.ngd.gz 418.8 Kb (ftp)(http) NGD

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