GEO help: Mouse over screen elements for information.
Status
Public on Jul 16, 2014
Title
NERCMDSNU Homo sapiens 15K version 1.0
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
National Engineering Research Center for Miniaturized Detection Systems, Northwest University, Xi'an, Shaanxi
Manufacture protocol
1. Use the primer 5.0 to design probes and test them with oligo6.0 software. The principles of probe design as follows:(1) the length of probe is 59 bases, and annealing temperature is 78.0±5.°C, (2) tandem duplication bases was not more than 6,(3) the stem structure of stem loop in the internal of probes was not more than 6bases, (4) the most stable secondary structure base pairing of probe molecule was less than 6bp, (5) the Score value is less than 40, after comparing the probes with non-targeting gene sequence, which means the serial homology fragments were not more than 20 bases.
Submission date
Jul 02, 2014
Last update date
Jul 16, 2014
Contact name
Xi Wang
E-mail(s)
231115210@qq.com Organization name
Xi‘an Jiaotong University Health Science Center
Street address
No.76 Yanta West Road
City
Xi'an
ZIP/Postal code
710061
Country
China
Samples (200)
GSM1436980 , GSM1436981 , GSM1436982 , GSM1436983 , GSM1436984 , GSM1436985
GSM1436986 ,
GSM1436987 ,
GSM1436988 ,
GSM1436989 ,
GSM1436990 ,
GSM1436991 ,
GSM1436992 ,
GSM1436993 ,
GSM1436994 ,
GSM1436995 ,
GSM1436996 ,
GSM1436997 ,
GSM1436998 ,
GSM1436999 ,
GSM1437000 ,
GSM1437001 ,
GSM1437002 ,
GSM1437003 ,
GSM1437004 ,
GSM1437005 ,
GSM1437006 ,
GSM1437007 ,
GSM1437008 ,
GSM1437009 ,
GSM1437010 ,
GSM1437011 ,
GSM1437012 ,
GSM1437013 ,
GSM1437014 ,
GSM1437015 ,
GSM1437016 ,
GSM1437017 ,
GSM1437018 ,
GSM1437019 ,
GSM1437020 ,
GSM1437021 ,
GSM1437022 ,
GSM1437023 ,
GSM1437024 ,
GSM1437025 ,
GSM1437026 ,
GSM1437027 ,
GSM1437028 ,
GSM1437029 ,
GSM1437030 ,
GSM1437031 ,
GSM1437032 ,
GSM1437033 ,
GSM1437034 ,
GSM1437035 ,
GSM1437036 ,
GSM1437037 ,
GSM1437038 ,
GSM1437039 ,
GSM1437040 ,
GSM1437041 ,
GSM1437042 ,
GSM1437043 ,
GSM1437044 ,
GSM1437045 ,
GSM1437046 ,
GSM1437047 ,
GSM1437048 ,
GSM1437049 ,
GSM1437050 ,
GSM1437051 ,
GSM1437052 ,
GSM1437053 ,
GSM1437054 ,
GSM1437055 ,
GSM1437056 ,
GSM1437057 ,
GSM1437058 ,
GSM1437059 ,
GSM1437060 ,
GSM1437061 ,
GSM1437062 ,
GSM1437063 ,
GSM1437064 ,
GSM1437065 ,
GSM1437066 ,
GSM1437067 ,
GSM1437068 ,
GSM1437069 ,
GSM1437070 ,
GSM1437071 ,
GSM1437072 ,
GSM1437073 ,
GSM1437074 ,
GSM1437075 ,
GSM1437076 ,
GSM1437077 ,
GSM1437078 ,
GSM1437079 ,
GSM1437080 ,
GSM1437081 ,
GSM1437082 ,
GSM1437083 ,
GSM1437084 ,
GSM1437085 ,
GSM1437086 ,
GSM1437087 ,
GSM1437088 ,
GSM1437089 ,
GSM1437090 ,
GSM1437091 ,
GSM1437092 ,
GSM1437093 ,
GSM1437094 ,
GSM1437095 ,
GSM1437096 ,
GSM1437097 ,
GSM1437098 ,
GSM1437099 ,
GSM1437100 ,
GSM1437101 ,
GSM1437102 ,
GSM1437103 ,
GSM1437104 ,
GSM1437105 ,
GSM1437106 ,
GSM1437107 ,
GSM1437108 ,
GSM1437109 ,
GSM1437110 ,
GSM1437111 ,
GSM1437112 ,
GSM1437113 ,
GSM1437114 ,
GSM1437115 ,
GSM1437116 ,
GSM1437117 ,
GSM1437118 ,
GSM1437119 ,
GSM1437120 ,
GSM1437121 ,
GSM1437122 ,
GSM1437123 ,
GSM1437124 ,
GSM1437125 ,
GSM1437126 ,
GSM1437127 ,
GSM1437128 ,
GSM1437129 ,
GSM1437130 ,
GSM1437131 ,
GSM1437132 ,
GSM1437133 ,
GSM1437134 ,
GSM1437135 ,
GSM1437136 ,
GSM1437137 ,
GSM1437138 ,
GSM1437139 ,
GSM1437140 ,
GSM1437141 ,
GSM1437142 ,
GSM1437143 ,
GSM1437144 ,
GSM1437145 ,
GSM1437146 ,
GSM1437147 ,
GSM1437148 ,
GSM1437149 ,
GSM1437150 ,
GSM1437151 ,
GSM1437152 ,
GSM1437153 ,
GSM1437154 ,
GSM1437155 ,
GSM1437156 ,
GSM1437157 ,
GSM1437158 ,
GSM1437159 ,
GSM1437160 ,
GSM1437161 ,
GSM1437162 ,
GSM1437163 ,
GSM1437164 ,
GSM1437165 ,
GSM1437166 ,
GSM1437167 ,
GSM1437168 ,
GSM1437169 ,
GSM1437170 ,
GSM1437171 ,
GSM1437172 ,
GSM1437173 ,
GSM1437174 ,
GSM1437175 ,
GSM1437176 ,
GSM1437177 ,
GSM1437178 ,
GSM1437179 Series (1)
GSE59446 Human Peripheral blood mononuclear cells (PBMCs): Control vs. Kashin-Beck Disease
Data table header descriptions ID GB_ACC GENE SYMBOL DESCRIPTION SEQUENCE SPOT_ID
Data table ID GB_ACC GENE SYMBOL DESCRIPTION SEQUENCE SPOT_ID 1001
A_32_P222060
TAGAAGCAGAACAAGTAGCATCATGAATCTAATTCCTTGGGTTTCTTTGGTCCTTCAGT
A_32_P222060
1002
NM_144670
A2ML1
alpha-2-macroglobulin-like 1
AGGGCTGTGTCTATGTGCAGACGGTGTTGAGATACAATATTCTCCCTCCCACAAATATG
1003
NR_003087
ABCC13
ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
TTAACTTGATGTCAGCAACTCATGGACTTGACAGCAAACCTCAATCTCCTCTGGTCTGC
1004
NM_015429
ABI3BP
ABI family, member 3 (NESH) binding protein
CCACCATAAATGTTACAATATCTGAATATGCTTTGTCAAACTATCCCTTTATGCAATCG
1005
NM_005157
abl1 v-abl Abelson
c-abl oncogene 1, non-receptor tyrosine kinase
AGGCCCTAGCTTTACGCTCATCACCTAAACTTGTACTTTATTTTTCTGATAGAAATGGT
1006
NM_001009185
ACSL6
acyl-CoA synthetase long-chain family member 6
AAACAAATAGAAGAGCTTTACTCAATCTCCATGTGAAGTTCAAGGAAAGTTCTTCTCAG
1007
AF075108
AF075108
GAGAAGTGCATAATGACGCTGCGAGTATCATCGTGATTAGAGCTGGGCCTGCCACACAG
1008
AF116618
AF116618
CCCAACACTGTAAATATCTGACTTCACATTATACCCATGTAAATCCTGTCTCAGTAGTT
1009
AF257098
AF257098
CGTTCCATGCTCACAGATAGGAAGAATCAATATCGTGAAAATGGCAATACCACCCAAAG
1010
NM_170740
ALDH5A1
aldehyde dehydrogenase 5 family, member A1
TATTTTCATTTCTGTCCTGTTTGCCACTTCATTTCATTTCCTTGAGTAAATGAGCTGAA
1011
AM181370
AM181370
TGTCCAGGGCCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAACAACAATGTT
1012
NM_002471
a-MYH6
myosin, heavy chain 6, cardiac muscle, alpha
GAAGACAAAAAGAACCTGCTGCGGCTACAGGACCTGGTGGACAAGCTGCAACTGAAGGT
1013
NM_022662
ANAPC1
anaphase promoting complex subunit 1
GTGAACCTACCCTGAAACGTGACTTCTGCACAACAAACGTGACCAAACATCAAAGCTAA
1014
NM_003905
APPBP1
NEDD8 activating enzyme E1 subunit 1
AAGCAAGCACCTTAAGTAGTGTGTTAATGATTGAAACTGTAATTGCCTTCGGGTTGTGC
1015
BC022486
AQP1
aquaporin 1 (Colton blood group)
TCTGCACACTCTCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAG
1016
NM_001184
ATR
ataxia telangiectasia and Rad3 related
TACCTTATACAAGAAGCTACTGATGAAAACTTACTATGCCAGATGTATCTTGGTTGGAC
1017
NM_004993
ATXN3
ataxin 3
TCCACTTTGGTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACA
1018
NM_006010
armet
mesencephalic astrocyte-derived neurotrophic factor
GGATTCCCTTCCTTCTGTTGCTGGTGTACTCTAGGACTTCAAAGTGTGTCTGGGATTTT
1019
AW966840
GGTTTGTCCAAAAGAAGGCCATATAGGTTCTTGGCTAGCGGAAGACAATTCAGAACAGC
AW966840
1020
NM_006577
B3GNT1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
TAGAATTGAAGGTTCTTATCAGATGGGATACTGGGGACTATAAACAATGGAAATAAAGC
169 18 Kbytes .Supplementary data files not provided
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