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Status
Public on Dec 31, 2005
Title
S. pombe 10K long oligonucleotide array
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Schizosaccharomyces pombe
Description
Spotted long oligonucleotide array on glass This set includes 9,858 oligonucleotides that represent 4,929 genes based on S. pombe genome (Sanger Center, UK, November 2001) Keywords = Spotted, 50-mer oligonucleotides
Web link
http://giscompute.gis.a-star.edu.sg/~gisljh/OligoArray
Contributor(s)
Miller LD , Li J , Liu J
Submission date
Mar 28, 2005
Last update date
Jan 18, 2013
Contact name
Jianhua Liu
E-mail(s)
liujh@gis.a-star.edu.sg
Organization name
Genome Institute of Singapore
Street address
60 Biopolis Street
City
Singapore
ZIP/Postal code
138672
Country
Singapore
Samples (499)
GSM46430 , GSM46431 , GSM46432 , GSM46433 , GSM46434 , GSM46435
GSM46436 ,
GSM46437 ,
GSM46438 ,
GSM46439 ,
GSM46440 ,
GSM46441 ,
GSM46442 ,
GSM46443 ,
GSM46444 ,
GSM46445 ,
GSM46446 ,
GSM46447 ,
GSM46448 ,
GSM46449 ,
GSM46450 ,
GSM46451 ,
GSM46452 ,
GSM46453 ,
GSM46454 ,
GSM46455 ,
GSM46456 ,
GSM46457 ,
GSM97410 ,
GSM97411 ,
GSM97412 ,
GSM97413 ,
GSM97414 ,
GSM97415 ,
GSM97416 ,
GSM97417 ,
GSM97418 ,
GSM97419 ,
GSM97420 ,
GSM97421 ,
GSM97422 ,
GSM97423 ,
GSM97424 ,
GSM97425 ,
GSM97426 ,
GSM97427 ,
GSM97428 ,
GSM97429 ,
GSM97430 ,
GSM97431 ,
GSM97432 ,
GSM97433 ,
GSM97434 ,
GSM97435 ,
GSM97436 ,
GSM97437 ,
GSM97438 ,
GSM97439 ,
GSM97440 ,
GSM97441 ,
GSM97442 ,
GSM97443 ,
GSM97444 ,
GSM97445 ,
GSM97446 ,
GSM97447 ,
GSM97448 ,
GSM97449 ,
GSM97450 ,
GSM97451 ,
GSM97452 ,
GSM97453 ,
GSM97454 ,
GSM97455 ,
GSM97456 ,
GSM97457 ,
GSM97458 ,
GSM97459 ,
GSM97460 ,
GSM97461 ,
GSM97462 ,
GSM97463 ,
GSM97464 ,
GSM97465 ,
GSM97466 ,
GSM97467 ,
GSM97468 ,
GSM97469 ,
GSM97470 ,
GSM97471 ,
GSM97472 ,
GSM97473 ,
GSM97474 ,
GSM97475 ,
GSM97476 ,
GSM97477 ,
GSM97478 ,
GSM97479 ,
GSM97480 ,
GSM97481 ,
GSM97482 ,
GSM97483 ,
GSM97484 ,
GSM97485 ,
GSM97486 ,
GSM97487 ,
GSM97488 ,
GSM97489 ,
GSM97490 ,
GSM97491 ,
GSM97494 ,
GSM97495 ,
GSM97496 ,
GSM97497 ,
GSM97498 ,
GSM97499 ,
GSM97500 ,
GSM97501 ,
GSM97502 ,
GSM97503 ,
GSM97504 ,
GSM97505 ,
GSM97506 ,
GSM97507 ,
GSM97508 ,
GSM97509 ,
GSM97510 ,
GSM97511 ,
GSM97512 ,
GSM97513 ,
GSM97514 ,
GSM97515 ,
GSM97518 ,
GSM97519 ,
GSM97520 ,
GSM97521 ,
GSM97522 ,
GSM97523 ,
GSM97524 ,
GSM97525 ,
GSM97526 ,
GSM97527 ,
GSM97528 ,
GSM97529 ,
GSM97530 ,
GSM97531 ,
GSM97532 ,
GSM97533 ,
GSM97534 ,
GSM97535 ,
GSM97536 ,
GSM97537 ,
GSM97538 ,
GSM97539 ,
GSM97542 ,
GSM97543 ,
GSM97544 ,
GSM97545 ,
GSM97546 ,
GSM97547 ,
GSM97548 ,
GSM97549 ,
GSM97550 ,
GSM97551 ,
GSM97552 ,
GSM97553 ,
GSM97554 ,
GSM97555 ,
GSM97556 ,
GSM97557 ,
GSM97558 ,
GSM97559 ,
GSM97560 ,
GSM97561 ,
GSM97562 ,
GSM97563 ,
GSM97566 ,
GSM97567 ,
GSM97568 ,
GSM97569 ,
GSM97570 ,
GSM97571 ,
GSM97572 ,
GSM97573 ,
GSM97574 ,
GSM97575 ,
GSM137670 ,
GSM137671 ,
GSM137672 ,
GSM137673 ,
GSM137674 ,
GSM160745 ,
GSM160746 ,
GSM160747 ,
GSM160748 ,
GSM160749 ,
GSM160750 ,
GSM160751 ,
GSM160752 ,
GSM160753 ,
GSM160754 ,
GSM160755 ,
GSM160756 ,
GSM160757 ,
GSM160758 ,
GSM160759 ,
GSM160760 ,
GSM160761 ,
GSM160762 ,
GSM160763 ,
GSM160764 ,
GSM160765 ,
GSM160766 ,
GSM160767 ,
GSM160768 ,
GSM160769 ,
GSM160770 ,
GSM160771 ,
GSM160772 ,
GSM160773 ,
GSM160774 ,
GSM160775 ,
GSM160776 ,
GSM160777 ,
GSM160778 ,
GSM160779 ,
GSM160780 ,
GSM160781 ,
GSM160782 ,
GSM160783 ,
GSM160784 ,
GSM160785 ,
GSM160786 ,
GSM160787 ,
GSM160788 ,
GSM160789 ,
GSM160790 ,
GSM160791 ,
GSM160792 ,
GSM160793 ,
GSM160794 ,
GSM160795 ,
GSM160796 ,
GSM160797 ,
GSM160798 ,
GSM160799 ,
GSM160800 ,
GSM160801 ,
GSM160802 ,
GSM160803 ,
GSM160804 ,
GSM160805 ,
GSM160806 ,
GSM160807 ,
GSM160808 ,
GSM160809 ,
GSM160810 ,
GSM160811 ,
GSM160812 ,
GSM160813 ,
GSM160814 ,
GSM276383 ,
GSM276384 ,
GSM276385 ,
GSM276386 ,
GSM276387 ,
GSM276388 ,
GSM276389 ,
GSM276390 ,
GSM276391 ,
GSM276392 ,
GSM276393 ,
GSM276394 ,
GSM276395 ,
GSM276396 ,
GSM276397 ,
GSM276398 ,
GSM276399 ,
GSM276400 ,
GSM276401 ,
GSM276402 ,
GSM276403 ,
GSM276404 ,
GSM276405 ,
GSM276406 ,
GSM276407 ,
GSM276408 ,
GSM276409 ,
GSM276410 ,
GSM276411 ,
GSM276412 ,
GSM276413 ,
GSM276414 ,
GSM276415 ,
GSM276416 ,
GSM276417 ,
GSM276418 ,
GSM276419 ,
GSM276420 ,
GSM276421 ,
GSM276422 ,
GSM318323 ,
GSM318324 ,
GSM318325 ,
GSM318326 ,
GSM318327 ,
GSM327056 ,
GSM327057 ,
GSM327058 ,
GSM327059 ,
GSM327060 ,
GSM327061 ,
GSM327062 ,
GSM327063 ,
GSM327064 ,
GSM327065 ,
GSM327066 ,
GSM327067 ,
GSM327068 ,
GSM327069 ,
GSM327070 ,
GSM327071 ,
GSM327072 ,
GSM327073 ,
GSM327074 ,
GSM327075 ,
GSM327076 ,
GSM327077 ,
GSM327078 ,
GSM327079 ,
GSM327080 ,
GSM327081 ,
GSM327082 ,
GSM327083 ,
GSM327084 ,
GSM327085 ,
GSM327086 ,
GSM327087 ,
GSM327088 ,
GSM327089 ,
GSM327090 ,
GSM327091 ,
GSM327092 ,
GSM327093 ,
GSM327094 ,
GSM327095 ,
GSM327096 ,
GSM327097 ,
GSM327098 ,
GSM327099 ,
GSM327100 ,
GSM1151976 ,
GSM1151977 ,
GSM1151978 ,
GSM1151979 ,
GSM1151980 ,
GSM1151981 ,
GSM1151982 ,
GSM1151983 ,
GSM1151984 ,
GSM1151985 ,
GSM1151986 ,
GSM1151987 ,
GSM1151988 ,
GSM1151989 ,
GSM1151990 ,
GSM1151991 ,
GSM1151992 ,
GSM1151993 ,
GSM1151994 ,
GSM1151995 ,
GSM1151996 ,
GSM1151997 ,
GSM1151998 ,
GSM1151999 ,
GSM1152000 ,
GSM1152001 ,
GSM1152002 ,
GSM1152003 ,
GSM1152004 ,
GSM1152005 ,
GSM1152006 ,
GSM1152007 ,
GSM1152008 ,
GSM1152009 ,
GSM1152010 ,
GSM1152011 ,
GSM1152012 ,
GSM1152013 ,
GSM1152014 ,
GSM1152015 ,
GSM1152016 ,
GSM1152017 ,
GSM1152018 ,
GSM1152019 ,
GSM1152020 ,
GSM1152021 ,
GSM1152022 ,
GSM1152023 ,
GSM1152024 ,
GSM1152025 ,
GSM1152026 ,
GSM1152027 ,
GSM1152028 ,
GSM1152029 ,
GSM1152030 ,
GSM1152031 ,
GSM1152032 ,
GSM1152033 ,
GSM1152034 ,
GSM1152035 ,
GSM1152036 ,
GSM1152037 ,
GSM1152038 ,
GSM1152039 ,
GSM1152040 ,
GSM1152041 ,
GSM1152042 ,
GSM1152043 ,
GSM1152044 ,
GSM1152045 ,
GSM1152046 ,
GSM1152047 ,
GSM1152048 ,
GSM1152049 ,
GSM1152050 ,
GSM1152051 ,
GSM1152052 ,
GSM1152053 ,
GSM1152054 ,
GSM1152055 ,
GSM1152056 ,
GSM1152057 ,
GSM1152058 ,
GSM1152059 ,
GSM1152060 ,
GSM1152061 ,
GSM1152062 ,
GSM1152063 ,
GSM1152064 ,
GSM1152065 ,
GSM1152066 ,
GSM1152067 ,
GSM1152068 ,
GSM1152069 ,
GSM1152070 ,
GSM1152071 ,
GSM1152072 ,
GSM1152073 ,
GSM1152074 ,
GSM1152075 ,
GSM1152076 ,
GSM1152077 ,
GSM1152078 ,
GSM1152079 ,
GSM1152080 ,
GSM1152081 ,
GSM1152082 ,
GSM1152083 ,
GSM1152084 ,
GSM1152085 ,
GSM1152086 ,
GSM1152087 ,
GSM1152088 ,
GSM1152089 ,
GSM1152090 ,
GSM1152091 ,
GSM1152092 ,
GSM1152093 ,
GSM1152094 ,
GSM1152095 ,
GSM1152096 ,
GSM1152097 ,
GSM1152098 ,
GSM1152099 ,
GSM1152100 ,
GSM1152101 ,
GSM1152102 ,
GSM1152103 ,
GSM1152104 ,
GSM1152105 ,
GSM1152106 ,
GSM1152107 ,
GSM1152108 ,
GSM1152109 ,
GSM1152110 ,
GSM1152111 ,
GSM1152112 ,
GSM1152113 ,
GSM1152114 ,
GSM1152115 ,
GSM1152116 ,
GSM1152117 ,
GSM1152118 ,
GSM1152119 ,
GSM1152120 ,
GSM1152121 ,
GSM1152122 ,
GSM1152123
Series (10)
GSE2453
Independent repeat hybridizations
GSE4280
HU treated cells vs wildtype untreated cells (asynchronized cells)
GSE4283
HU treated cells vs wildtype untreated cells (elutriation centrifugation synchronized cells)
GSE4284
Cell Cycle-specific Expressions Are Modulated by Replication Checkpoint Kinases Rad3 and Cds1 in Fission Yeast
GSE5941
Schizosaccharomyces pombe ployg mutant cells expression profile.
GSE6977
Genome-wide Profiling of DNA Replication Timing in pombe.
GSE10901
Altered genes expression profile of Rep2 mutants in Fission Yeast upon HU treatment.
GSE12674
TRRAP-mediated regulation of Wee1
GSE13053
Atf1-mediated active gene response to H2O2 challenge.
GSE47544
Transcriptional profiling analysis of S. pombe kinase deletin strains treated (60min) or untreated (0min) with nitrogen starvation in comparison with a common reference.
Data table header descriptions
ID
ORF
Systematic name
Gene Symbol
gene symbol when available
Dist3'
Oligonucleotide position to its 3'-end of the gene
MinHD
The minimal Hamming distance
GC
Number of GC nucleotide (50 in total)
SEQUENCE
Oligonucleotide sequence
Data table
ID
ORF
Gene Symbol
Dist3'
MinHD
GC
SEQUENCE
c1348_1000011
SPBC1348.01
225
21
24
AGCCCTGGGTGCAACTATAACTGGCCTTTTGTATTTTGGTCATTGGGCTC
c1348_1000012
SPBC1348.01
138
21
23
TGTGACACCAGGAGACGTCTGTGTTTCTAACACTCTTCCTACACATAACG
c1348_1000021
SPBC1348.02
954
20
24
GGGATCATTTGCATATTCTGGTAACTCGGAATCGGTATGGACGGGCGAAA
c1348_1000022
SPBC1348.02
66
20
23
CACCCATAATGAAGCACTTGCCTACAATCGAAATGTAGCTGAAGAGGCTC
c1348_1000031
SPBC1348.03
69
21
21
CTCGAAAACCGATATTAGTGATCTGCACCAGGGCTATAATAATCCACCAT
c1348_1000032
SPBC1348.03
84
18
21
CAAGAATCATTCTTACTCGAAAACCGATATTAGTGATCTGCACCAGGGCT
c1348_1000041
SPBC1348.04
84
20
24
CAAATCACGTTATAGACGGTGGCAGGGCCATAAAAGGTATTCCCTCGCTT
c1348_1000042
SPBC1348.04
77
20
23
CGTTATAGACGGTGGCAGGGCCATAAAAGGTATTCCCTCGCTTTAAAAAG
c1348_1000051
SPBC1348.05
744
20
23
AGGAGAAAATGAACCAGTAGCGTTGCGTCTCACAGGTAAGCAACTGCTTA
c1348_1000052
SPBC1348.05
747
20
23
AATAGGAGAAAATGAACCAGTAGCGTTGCGTCTCACAGGTAAGCAACTGC
c1348_1000061
SPBC1348.06c
78
21
25
TAACGAGGAAGGCATGCCAAGTTGGTGTCAGCCCATTGAACTTACACCAG
c1348_1000062
SPBC1348.06c
81
21
23
TAATAACGAGGAAGGCATGCCAAGTTGGTGTCAGCCCATTGAACTTACAC
c1348_1000071
SPBC1348.07
240
20
23
GATCAGTATAGTTATAGCAGCGGTCGTAGTAATTATCGCGGTGGCTATGG
c1348_1000072
SPBC1348.07
245
20
23
CCATTGATCAGTATAGTTATAGCAGCGGTCGTAGTAATTATCGCGGTGGC
c1348_1000081
SPBC1348.08c
60
20
23
ATTCTTACCATTTGGTCAAGGTAATGGCGGTGTAAACGGGCCAACGGAAA
c1348_1000082
SPBC1348.08c
65
21
23
CAACAATTCTTACCATTTGGTCAAGGTAATGGCGGTGTAAACGGGCCAAC
c1348_1000091
SPBC1348.09
132
20
25
GCAAGCGGCAACGGATGAAAGTGATGAGCTACGATACCCTACTGGAGATT
c1348_1000092
SPBC1348.09
135
21
25
ATTGCAAGCGGCAACGGATGAAAGTGATGAGCTACGATACCCTACTGGAG
c1348_1000101
SPAC977.09c
66
21
24
AGCATCAGCCACTCCCACTCATAAACATTGGTGGGACTCGATTTTCGAAG
c1348_1000102
SPAC977.09c
69
20
24
TGTAGCATCAGCCACTCCCACTCATAAACATTGGTGGGACTCGATTTTCG
Total number of rows: 9858 Table truncated, full table size 865 Kbytes .
Supplementary data files not provided