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| Status |
Public on Apr 28, 2016 |
| Title |
NCI Glycoarray-380 |
| Technology type |
spotted peptide or protein |
| Distribution |
non-commercial |
| Organisms |
Quercus alba; Gossypium hirsutum; Rhodotorula; Trypanosoma cruzi; Pandalus borealis; Oncorhynchus nerka; Gallus gallus; Homo sapiens; Bos taurus; Ovis aries; Mus musculus; Ceratonia siliqua; Megathura crenulata; Bothrops moojeni; Frangula alnus; Senegalia senegal; Pachymenia carnosa; Dermestes lardarius |
| Manufacturer |
National Cancer Institute, Chemical Glycobiology Section |
| Manufacture protocol |
Glycoproteins and neoglycoproteins spotted onto epoxide functionalized glass slides (ArrayIt SMP2) using a MicroGrid II arrayer.
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| Support |
Glass |
| Coating |
Epoxide |
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| Description |
Each slide contains 16 identical array containing 380 components printed in duplicate (760 features total)
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| Citation(s) |
22057524 |
| Submission date |
Apr 28, 2015 |
| Last update date |
Apr 28, 2016 |
| Contact name |
Jeff Gildersleeve |
| Organization name |
National Cancer Institute
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| Street address |
376 Boyles St.
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| City |
Frederick |
| State/province |
MD |
| ZIP/Postal code |
21702 |
| Country |
USA |
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| Samples (220)
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GSM1670921, GSM1670922, GSM1670923, GSM1670924, GSM1670925, GSM1670926
GSM1670927, GSM1670928, GSM1670929, GSM1670930, GSM1670931, GSM1670932, GSM1670933, GSM1670934, GSM1670935, GSM1670936, GSM1670937, GSM1670938, GSM1670939, GSM1670940, GSM1670941, GSM1670942, GSM1670943, GSM1670944, GSM1670945, GSM1670946, GSM1670947, GSM1670948, GSM1670949, GSM1670950, GSM1670951, GSM1670952, GSM1670953, GSM1670954, GSM1670955, GSM1670956, GSM1670957, GSM1670958, GSM1670959, GSM1670960, GSM1670961, GSM1670962, GSM1670963, GSM1670964, GSM1670965, GSM1670966, GSM1670967, GSM1670968, GSM1670969, GSM1670970, GSM1670971, GSM1670972, GSM1670973, GSM1670974, GSM1670975, GSM1670976, GSM1670977, GSM1670978, GSM1670979, GSM1670980, GSM1670981, GSM1670982, GSM1670983, GSM1670984, GSM1670985, GSM1670986, GSM1670987, GSM1670988, GSM1670989, GSM1670990, GSM1670991, GSM1670992, GSM1670993, GSM1670994, GSM1670995, GSM1670996, GSM1670997, GSM1670998, GSM1670999, GSM1671000, GSM1671001, GSM1671002, GSM1671003, GSM1671004, GSM1671005, GSM1671006, GSM1671007, GSM1671008, GSM1671009, GSM1671010, GSM1671011, GSM1671012, GSM1671013, GSM1671014, GSM1671015, GSM1671016, GSM1671017, GSM1671018, GSM1671019, GSM1671020, GSM1671021, GSM1671022, GSM1671023, GSM1671024, GSM1671025, GSM1671026, GSM1671027, GSM1671028, GSM1671029, GSM1671030, GSM1671031, GSM1671032, GSM1671033, GSM1671034, GSM1671035, GSM1671036, GSM1671037, GSM1671038, GSM1671039, GSM1671040, GSM1671041, GSM1671042, GSM1671043, GSM1671044, GSM1671045, GSM1671046, GSM1671047, GSM1671048, GSM1671049, GSM1671050, GSM1671051, GSM1671052, GSM1671053, GSM1671054, GSM1671055, GSM1671056, GSM1671057, GSM1671058, GSM1671059, GSM1671060, GSM1671061, GSM1671062, GSM1671063, GSM1671064, GSM1671065, GSM1671066, GSM1671067, GSM1671068, GSM1671069, GSM1671070, GSM1671071, GSM1671072, GSM1671073, GSM1671074, GSM1671075, GSM1671076, GSM1671077, GSM1671078, GSM1671079, GSM1671080, GSM1671081, GSM1671082, GSM1671083, GSM1671084, GSM1671085, GSM1671086, GSM1671087, GSM1671088, GSM1671089, GSM1671090, GSM1671091, GSM1671092, GSM1671093, GSM1671094, GSM1671095, GSM1671096, GSM1671097, GSM1671098, GSM1671099, GSM1671100, GSM1671101, GSM1671102, GSM1671103, GSM1671104, GSM1671105, GSM1671106, GSM1671107, GSM1671108, GSM1671109, GSM1671110, GSM1671111, GSM1671112, GSM1671113, GSM1671114, GSM1671115, GSM1671116, GSM1671117, GSM1671118, GSM1671119, GSM1671120, GSM1671121, GSM1671122, GSM1671123, GSM1671124, GSM1671125, GSM1671126, GSM1671127, GSM1671128, GSM1671129, GSM1671130, GSM1671131, GSM1671132, GSM1671133, GSM1671134, GSM1671135, GSM1671136, GSM1671137, GSM1671138, GSM1671139, GSM1671140
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| Series (2) |
| GSE68403 |
Development of a glycan microarray based method for ABO blood typing |
| GSE68405 |
A Simple, Inexpensive Strategy for Predicting Potential Beneficial Clinical Responses on Prostate Cancer Vaccine Therapy |
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| Data table header descriptions |
| ID |
a380 Print # |
| SPOT_ID |
|
| DESCRIPTION |
|
| LINKER |
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| CORE |
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| SUGAR_RATIO |
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| ORGANISM |
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| Data table |
| ID |
SPOT_ID |
DESCRIPTION |
LINKER |
CORE |
SUGAR_RATIO |
ORGANISM |
| 1 |
Cy3 |
Cy3-BSA (20mg/mL + BSA, 125mg/mL total) |
na |
BSA |
|
null |
| 2 |
BSA |
Bovine serum albumin |
na |
BSA |
na |
Bos taurus |
| 3 |
Maltose - 23 |
Glca1-4Glcb-BSA |
MEAG |
BSA |
23 |
Homo sapiens |
| 4 |
Glc-b - 23 |
Glc-b - BSA |
MEAG |
BSA |
23 |
Homo sapiens |
| 5 |
GalNAc-a - 22 |
GalNAc-a - BSA |
MEAG |
BSA |
22 |
Homo sapiens |
| 6 |
Glc-a - 22 |
Glc-a - BSA |
MEAG |
BSA |
22 |
Homo sapiens |
| 7 |
Man-a - 20 |
Man-a - BSA |
MEAG |
BSA |
20 |
Homo sapiens |
| 8 |
GlcNAc-b -21 |
GlcNAc-b - BSA |
MEAG |
BSA |
21 |
Homo sapiens |
| 9 |
GalNAc-b - 21 |
GalNAc-b - BSA |
MEAG |
BSA |
21 |
Homo sapiens |
| 10 |
Fuc-b - 22 |
Fuc-b - BSA |
MEAG |
BSA |
22 |
bos taurus |
| 11 |
Fuc-a - 22 |
Fuc-a - BSA |
MEAG |
BSA |
22 |
Homo sapiens |
| 12 |
Rha-a - 18 |
Rha-a ? BSA |
MEAG |
BSA |
18 |
Rhamnus frangula |
| 13 |
Rha-b - 21 |
Rha-b - BSA |
MEAG |
BSA |
21 |
Rhamnus frangula |
| 14 |
Gal-a- 24 |
Gal-a - BSA |
MEAG |
BSA |
24 |
Homo sapiens |
| 15 |
Gal-b- 21 |
Gal-b - BSA |
MEAG |
BSA |
21 |
Homo sapiens |
| 16 |
Ac-Tn(Thr)-G - 21 |
Ac(GalNAca)Thr-Gly-Hex-BSA |
hex |
BSA |
21 |
Homo sapiens |
| 17 |
GalNAca1-6Galb - 22 |
GalNAca1-6Galb-BSA |
MEAG |
BSA |
22 |
Homo sapiens |
| 18 |
Adi - 17 |
GalNAca1-3Galb-BSA |
MEAG |
BSA |
17 |
Homo sapiens |
| 19 |
GlcNAca1-4Galb - 20 |
GlcNAca1-4Galb-BSA |
MEAG |
BSA |
20 |
Homo sapiens |
| 20 |
Bdi -23 |
Gala1-3Gal? BSA |
14 atom spacer |
BSA |
23 |
Mus musculus |
Total number of rows: 380
Table truncated, full table size 31 Kbytes.
| Supplementary data files not provided |
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