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Status
Public on Jan 31, 2017
Title
NimbleGen Arabidopsis thaliana Gene Expression 12x135K Array [080924_AT6_expr]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Arabidopsis thaliana
Manufacturer
NimbleGen
Manufacture protocol
See manufacturer's website at http://www.nimblegen.com/
Description
BUILD: Release 6
Submission date
Oct 20, 2016
Last update date
Jan 31, 2017
Contact name
Yifeng XU
E-mail(s)
yifeng@tll.org.sg
Phone
68727742
Organization name
Temasek Life Sciences Laboratory
Street address
1 Research Link
City
Singapore
State/province
-
ZIP/Postal code
117604
Country
Singapore
Samples (6)
GSM2356592 , GSM2356593 , GSM2356594 , GSM2356595 , GSM2356596 , GSM2356597
Series (1)
GSE88969
Gene expression analysis of the inflorescence of knu-1 and crc-1 knu-1
Data table header descriptions
ID
SEQ_ID
ORF
Gene Name
DESCRIPTION
Transcript descriptions
GB_ACC
GenBank Accession number
CHROMOSOME
START
STOP
Gene ID
SPOT_ID
Data table
ID
ORF
DESCRIPTION
GB_ACC
CHROMOSOME
START
STOP
Gene ID
SPOT_ID
AT1G01010
ANAC001
ANAC001; transcription factor
NM_099983
chr1
3631
5899
839580
AT1G01020
ARV1
ARV1
NM_099984
chr1
6790
8737
839569
AT1G01030
AT1G01030
transcription factor
NM_099985
chr1
11649
13611
839321
AT1G01040
DCL1
DCL1 (DICER-LIKE1); ATP-dependent helicase/ ribonuclease III
NM_099986
chr1
23146
31164
839574
AT1G01050
AT1G01050
inorganic diphosphatase/ magnesium ion binding / pyrophosphatase
NM_099987
chr1
31181
33148
839579
AT1G01060
LHY
LHY (LATE ELONGATED HYPOCOTYL); DNA binding
NM_099988
chr1
33379
37840
839341
AT1G01070
AT1G01070
unknown protein
NM_099989
chr1
38753
40944
839550
AT1G01080
AT1G01080
RNA binding / nucleic acid binding
NM_099990
chr1
45296
47019
839463
AT1G01090
PDH-E1 ALPHA
PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)
NM_099991
chr1
47485
49279
839429
AT1G01100
AT1G01100
structural constituent of ribosome
NM_099992
chr1
50091
51182
839410
AT1G01110
AT1G01110
unknown protein
NM_099993
chr1
52869
54685
839394
AT1G01120
KCS1
KCS1; acyltransferase
NM_099994
chr1
57269
59167
839395
AT1G01130
AT1G01130
unknown protein
NM_099995
chr1
61963
63811
839359
AT1G01140
CIPK9
CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase
NM_099996
chr1
64167
67625
839349
AT1G01150
AT1G01150
unknown protein
NM_099997
chr1
70115
71998
839294
AT1G01160
GIF2
GIF2 (GRF1-INTERACTING FACTOR 2)
NM_099998
chr1
72357
74096
839278
AT1G01170
AT1G01170
unknown protein
NM_099999
chr1
73824
74731
839263
AT1G01180
AT1G01180
unknown protein
NM_100000
chr1
75633
77446
839239
AT1G01190
CYP78A8
CYP78A8; heme binding / iron ion binding / monooxygenase/ oxygen binding
NM_100001
chr1
83045
84864
839233
AT1G01200
AT1G01200
GTP binding
NM_100002
chr1
86516
88213
839493
Total number of rows: 30380 Table truncated, full table size 2916 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL22590_080924_AT6_expr.ndf.gz
7.1 Mb
(ftp) (http)
NDF
GPL22590_080924_AT6_expr.ngd.gz
1.4 Mb
(ftp) (http)
NGD