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Platform GPL22590 Query DataSets for GPL22590
Status Public on Jan 31, 2017
Title NimbleGen Arabidopsis thaliana Gene Expression 12x135K Array [080924_AT6_expr]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Arabidopsis thaliana
Manufacturer NimbleGen
Manufacture protocol See manufacturer's website at http://www.nimblegen.com/
 
Description BUILD: Release 6
 
Submission date Oct 20, 2016
Last update date Jan 31, 2017
Contact name Yifeng XU
E-mail(s) yifeng@tll.org.sg
Phone 68727742
Organization name Temasek Life Sciences Laboratory
Street address 1 Research Link
City Singapore
State/province -
ZIP/Postal code 117604
Country Singapore
 
Samples (6) GSM2356592, GSM2356593, GSM2356594, GSM2356595, GSM2356596, GSM2356597
Series (1)
GSE88969 Gene expression analysis of the inflorescence of knu-1 and crc-1 knu-1

Data table header descriptions
ID SEQ_ID
ORF Gene Name
DESCRIPTION Transcript descriptions
GB_ACC GenBank Accession number
CHROMOSOME
START
STOP
Gene ID
SPOT_ID

Data table
ID ORF DESCRIPTION GB_ACC CHROMOSOME START STOP Gene ID SPOT_ID
AT1G01010 ANAC001 ANAC001; transcription factor NM_099983 chr1 3631 5899 839580
AT1G01020 ARV1 ARV1 NM_099984 chr1 6790 8737 839569
AT1G01030 AT1G01030 transcription factor NM_099985 chr1 11649 13611 839321
AT1G01040 DCL1 DCL1 (DICER-LIKE1); ATP-dependent helicase/ ribonuclease III NM_099986 chr1 23146 31164 839574
AT1G01050 AT1G01050 inorganic diphosphatase/ magnesium ion binding / pyrophosphatase NM_099987 chr1 31181 33148 839579
AT1G01060 LHY LHY (LATE ELONGATED HYPOCOTYL); DNA binding NM_099988 chr1 33379 37840 839341
AT1G01070 AT1G01070 unknown protein NM_099989 chr1 38753 40944 839550
AT1G01080 AT1G01080 RNA binding / nucleic acid binding NM_099990 chr1 45296 47019 839463
AT1G01090 PDH-E1 ALPHA PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) NM_099991 chr1 47485 49279 839429
AT1G01100 AT1G01100 structural constituent of ribosome NM_099992 chr1 50091 51182 839410
AT1G01110 AT1G01110 unknown protein NM_099993 chr1 52869 54685 839394
AT1G01120 KCS1 KCS1; acyltransferase NM_099994 chr1 57269 59167 839395
AT1G01130 AT1G01130 unknown protein NM_099995 chr1 61963 63811 839359
AT1G01140 CIPK9 CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase NM_099996 chr1 64167 67625 839349
AT1G01150 AT1G01150 unknown protein NM_099997 chr1 70115 71998 839294
AT1G01160 GIF2 GIF2 (GRF1-INTERACTING FACTOR 2) NM_099998 chr1 72357 74096 839278
AT1G01170 AT1G01170 unknown protein NM_099999 chr1 73824 74731 839263
AT1G01180 AT1G01180 unknown protein NM_100000 chr1 75633 77446 839239
AT1G01190 CYP78A8 CYP78A8; heme binding / iron ion binding / monooxygenase/ oxygen binding NM_100001 chr1 83045 84864 839233
AT1G01200 AT1G01200 GTP binding NM_100002 chr1 86516 88213 839493

Total number of rows: 30380

Table truncated, full table size 2916 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL22590_080924_AT6_expr.ndf.gz 7.1 Mb (ftp)(http) NDF
GPL22590_080924_AT6_expr.ngd.gz 1.4 Mb (ftp)(http) NGD

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