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Platform GPL24057 Query DataSets for GPL24057
Status Public on Sep 28, 2017
Title Nanostring nCounter Treg Custom CodeSet
Technology type other
Distribution custom-commercial
Organism Mus musculus
Manufacturer NanoString Technologies
Manufacture protocol See manufacturer's website (www.nanostring.com)
 
 
Submission date Sep 27, 2017
Last update date Sep 28, 2017
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Samples (144) GSM2795708, GSM2795709, GSM2795710, GSM2795711, GSM2795712, GSM2795713 
Series (2)
GSE104344 FoxP3 scanning mutagenesis reveals functional variegation and mild mutations with atypical autoimmune phenotypes [nanostring]
GSE104346 FoxP3 scanning mutagenesis reveals functional variegation and mild mutations with atypical autoimmune phenotypes

Data table header descriptions
ID
GB_ACC RefSeq Accession
TARGET_REGION Target region
TARGET_SEQUENCE Target sequence
ORF ORF Name
SPOT_ID

Data table
ID GB_ACC TARGET_REGION TARGET_SEQUENCE ORF SPOT_ID
Actb NM_007393 815-915 CAGGTCATCACTATTGGCAACGAGCGGTTCCGATGCCCTGAGGCTCTTTTCCAGCCTTCCTTCTTGGGTATGGAATCCTGTGGCATCCATGAAACTACAT Actb
Ahr NM_013464.4 1327-1427 CTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTG Ahr
Anln NM_028390.3 3230-3330 TGTTCTCTCTGGCAACTGTATCTCTTACTGGACTTACCCAGATGATGAGAGGCGAAAGAATCCCATAGGAAGGATAAATCTGGCCAATTGTATCAGTCAT Anln
Arhgap31 NM_020260.2 6625-6725 CCACACTGGCAGGTGACTTAAATTCTGAGGACTGATTTCAAAATGACTACCACGTTCCCTTACACACCATTCACTTATGACATCACCTTCAGGAGAGCAG Arhgap31
Atp5l NM_013795.5 248-348 CATTCAAAGTGCTAAAACTGGTAGCTTCAAACACCTTACAGTTAAGGAAGCTGTGCTGAATGGTTTGGTGGCCACTGAGGTGTGGATGTGGTTTTATATC Atp5l
BC005685 BC005685.1 58-158 CCCTGAGGATTGGGATGATTTAGAGGAACAAGCGGCACATTATCATGATGATGATGAGCTAATCCTTCCAGTAAAAAGGAAGGTGGTTAAAAAGAAACCT BC005685
Bcl2 NM_009741.3 314-414 CCGCGGCCCCAGCGCGTCCGTGCCTGCATTTAGCAAGCTGCTTTTTTTCCCGTTTCGGAAAGCGCGTTGGCCCTTCGGAGTTTAATCAGAAGAGGATTCC Bcl2
Capg NM_007599.3 826-926 GAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGCTAATTCCAGATGACTGCTTTGTTCTGGACAACGGGCTGTGTGGCAAAATCTAC Capg
Ccl3 NM_011337.1 60-160 TCTGTCACCTGCTCAACATCATGAAGGTCTCCACCACTGCCCTTGCTGTTCTTCTCTGTACCATGACACTCTGCAACCAAGTCTTCTCAGCGCCATATGG Ccl3
Ccl5 NM_013653.1 165-265 CCTCGTGCCCACGTCAAGGAGTATTTCTACACCAGCAGCAAGTGCTCCAATCTTGCAGTCGTGTTTGTCACTCGAAGGAACCGCCAAGTGTGTGCCAACC Ccl5
Ccr1 NM_009912.4 1526-1626 CTTCTGATTCAGACCATAGGTGTCAACCAAGGAAGGTCTAAGAAGAGAATGAGGAGACAGTATATAGCTCTCCAAGACTGATACTGACAGTTCTTACAGT Ccr1
Ccr2 NM_009915.2 2965-3065 ATGAACTAACATAGACAGCTCAGGATTAACAGGGACTTGTGGTTTGTGGTCTGTGGGCTTATCCAAGCATGGTGATTTAGACTCTAAGGTCCGTCTGGAT Ccr2
Ccr4 NM_009916.2 1670-1770 GCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAATGCCCTTGTAATTCTAGCTACTCCGGGGATAAGGCCAAGAGATCTTAGATTCAAGGATGGC Ccr4
Ccr5 NM_009917.5 1340-1440 GGAGCAGGGAGAACGAGTCTTTTATCAGGGCCGGGAAATATGCACAAAGAGACTTGAGGCAGGTGCCATGACCCATATGCAAAGGGACGGACACAGGGCC Ccr5
Ccr7 NM_007719.2 755-855 CCCAGATGGTTTTTGGGTTCCTAGTGCCTATGCTGGCTATGAGTTTCTGCTACCTCATTATCATCCGTACCTTGCTCCAGGCACGCAACTTTGAGCGGAA Ccr7
Ccr8 NM_007720.2 426-526 GTTCTTCATCACCCTAATGAGTGTGGACAGGTATCTGGCTATTGTCCACGCTGTCTATGCCATCAAGGTGAGGACGGCCAGCGTGGGCACAGCCCTGAGT Ccr8
Cd200r1 NM_021325.3 1090-1190 AAGCTACTTCAGCTATTGAGGAGGATGAAATGCAGCCTTATGCTAGCTATACAGAGAAGAGCAATCCACTCTATGATACTGTGACTAAGGTGGAGGCATT Cd200r1
Cd226 NM_001039149.1 733-833 GAGACGGAGACAGGTGAGAATTCCACTTAAAGAGCCCAGGGATAAACAGAGTAAGGTAGCCACCAACTGCAGAAGTCCTACTTCTCCCATCCAGTCTACA Cd226
Cd3e NM_007648.4 380-480 TGAGTACTGTGTGGAGGTGGACCTGACAGCAGTAGCCATAATCATCATTGTTGACATCTGTATCACTCTGGGCTTGCTGATGGTCATTTATTACTGGAGC Cd3e
Cd4 NM_013488.2 950-1050 AAGAGGTGTCCGTACAAAAGTCCACCAAAGACCTCAAGCTCCAGCTGAAGGAAACGCTCCCACTCACCCTCAAGATACCCCAGGTCTCGCTTCAGTTTGC Cd4

Total number of rows: 199

Table truncated, full table size 26 Kbytes.




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