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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 28, 2017 |
| Title |
Nanostring nCounter Treg Custom CodeSet |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
NanoString Technologies |
| Manufacture protocol |
See manufacturer's website (www.nanostring.com)
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| Submission date |
Sep 27, 2017 |
| Last update date |
Sep 28, 2017 |
| Contact name |
CBDM Lab |
| E-mail(s) |
cbdm@hms.harvard.edu
|
| Phone |
617-432-7747
|
| Organization name |
Harvard Medical School
|
| Department |
Microbiology and Immunobiology
|
| Lab |
CBDM
|
| Street address |
77 Avenue Louis Pasteur
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
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|
| Samples (144)
|
GSM2795708, GSM2795709, GSM2795710, GSM2795711, GSM2795712, GSM2795713
GSM2795714, GSM2795715, GSM2795716, GSM2795717, GSM2795718, GSM2795719, GSM2795720, GSM2795721, GSM2795722, GSM2795723, GSM2795724, GSM2795725, GSM2795726, GSM2795727, GSM2795728, GSM2795729, GSM2795730, GSM2795731, GSM2795732, GSM2795733, GSM2795734, GSM2795735, GSM2795736, GSM2795737, GSM2795738, GSM2795739, GSM2795740, GSM2795741, GSM2795742, GSM2795743, GSM2795744, GSM2795745, GSM2795746, GSM2795747, GSM2795748, GSM2795749, GSM2795750, GSM2795751, GSM2795752, GSM2795753, GSM2795754, GSM2795755, GSM2795756, GSM2795757, GSM2795758, GSM2795759, GSM2795760, GSM2795761, GSM2795762, GSM2795763, GSM2795764, GSM2795765, GSM2795766, GSM2795767, GSM2795768, GSM2795769, GSM2795770, GSM2795771, GSM2795772, GSM2795773, GSM2795774, GSM2795775, GSM2795776, GSM2795777, GSM2795778, GSM2795779, GSM2795780, GSM2795781, GSM2795782, GSM2795783, GSM2795784, GSM2795785, GSM2795786, GSM2795787, GSM2795788, GSM2795789, GSM2795790, GSM2795791, GSM2795792, GSM2795793, GSM2795794, GSM2795795, GSM2795796, GSM2795797, GSM2795798, GSM2795799, GSM2795800, GSM2795801, GSM2795802, GSM2795803, GSM2795804, GSM2795805, GSM2795806, GSM2795807, GSM2795808, GSM2795809, GSM2795810, GSM2795811, GSM2795812, GSM2795813, GSM2795814, GSM2795815, GSM2795816, GSM2795817, GSM2795818, GSM2795819, GSM2795820, GSM2795821, GSM2795822, GSM2795823, GSM2795824, GSM2795825, GSM2795826, GSM2795827, GSM2795828, GSM2795829, GSM2795830, GSM2795831, GSM2795832, GSM2795833, GSM2795834, GSM2795835, GSM2795836, GSM2795837, GSM2795838, GSM2795839, GSM2795840, GSM2795841, GSM2795842, GSM2795843, GSM2795844, GSM2795845, GSM2795846, GSM2795847, GSM2795848, GSM2795849, GSM2795850, GSM2795851
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| Series (2) |
| GSE104344 |
FoxP3 scanning mutagenesis reveals functional variegation and mild mutations with atypical autoimmune phenotypes [nanostring] |
| GSE104346 |
FoxP3 scanning mutagenesis reveals functional variegation and mild mutations with atypical autoimmune phenotypes |
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| Data table header descriptions |
| ID |
|
| GB_ACC |
RefSeq Accession |
| TARGET_REGION |
Target region |
| TARGET_SEQUENCE |
Target sequence |
| ORF |
ORF Name |
| SPOT_ID |
|
| Data table |
| ID |
GB_ACC |
TARGET_REGION |
TARGET_SEQUENCE |
ORF |
SPOT_ID |
| Actb |
NM_007393 |
815-915 |
CAGGTCATCACTATTGGCAACGAGCGGTTCCGATGCCCTGAGGCTCTTTTCCAGCCTTCCTTCTTGGGTATGGAATCCTGTGGCATCCATGAAACTACAT |
Actb |
|
| Ahr |
NM_013464.4 |
1327-1427 |
CTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTG |
Ahr |
|
| Anln |
NM_028390.3 |
3230-3330 |
TGTTCTCTCTGGCAACTGTATCTCTTACTGGACTTACCCAGATGATGAGAGGCGAAAGAATCCCATAGGAAGGATAAATCTGGCCAATTGTATCAGTCAT |
Anln |
|
| Arhgap31 |
NM_020260.2 |
6625-6725 |
CCACACTGGCAGGTGACTTAAATTCTGAGGACTGATTTCAAAATGACTACCACGTTCCCTTACACACCATTCACTTATGACATCACCTTCAGGAGAGCAG |
Arhgap31 |
|
| Atp5l |
NM_013795.5 |
248-348 |
CATTCAAAGTGCTAAAACTGGTAGCTTCAAACACCTTACAGTTAAGGAAGCTGTGCTGAATGGTTTGGTGGCCACTGAGGTGTGGATGTGGTTTTATATC |
Atp5l |
|
| BC005685 |
BC005685.1 |
58-158 |
CCCTGAGGATTGGGATGATTTAGAGGAACAAGCGGCACATTATCATGATGATGATGAGCTAATCCTTCCAGTAAAAAGGAAGGTGGTTAAAAAGAAACCT |
BC005685 |
|
| Bcl2 |
NM_009741.3 |
314-414 |
CCGCGGCCCCAGCGCGTCCGTGCCTGCATTTAGCAAGCTGCTTTTTTTCCCGTTTCGGAAAGCGCGTTGGCCCTTCGGAGTTTAATCAGAAGAGGATTCC |
Bcl2 |
|
| Capg |
NM_007599.3 |
826-926 |
GAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGCTAATTCCAGATGACTGCTTTGTTCTGGACAACGGGCTGTGTGGCAAAATCTAC |
Capg |
|
| Ccl3 |
NM_011337.1 |
60-160 |
TCTGTCACCTGCTCAACATCATGAAGGTCTCCACCACTGCCCTTGCTGTTCTTCTCTGTACCATGACACTCTGCAACCAAGTCTTCTCAGCGCCATATGG |
Ccl3 |
|
| Ccl5 |
NM_013653.1 |
165-265 |
CCTCGTGCCCACGTCAAGGAGTATTTCTACACCAGCAGCAAGTGCTCCAATCTTGCAGTCGTGTTTGTCACTCGAAGGAACCGCCAAGTGTGTGCCAACC |
Ccl5 |
|
| Ccr1 |
NM_009912.4 |
1526-1626 |
CTTCTGATTCAGACCATAGGTGTCAACCAAGGAAGGTCTAAGAAGAGAATGAGGAGACAGTATATAGCTCTCCAAGACTGATACTGACAGTTCTTACAGT |
Ccr1 |
|
| Ccr2 |
NM_009915.2 |
2965-3065 |
ATGAACTAACATAGACAGCTCAGGATTAACAGGGACTTGTGGTTTGTGGTCTGTGGGCTTATCCAAGCATGGTGATTTAGACTCTAAGGTCCGTCTGGAT |
Ccr2 |
|
| Ccr4 |
NM_009916.2 |
1670-1770 |
GCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAATGCCCTTGTAATTCTAGCTACTCCGGGGATAAGGCCAAGAGATCTTAGATTCAAGGATGGC |
Ccr4 |
|
| Ccr5 |
NM_009917.5 |
1340-1440 |
GGAGCAGGGAGAACGAGTCTTTTATCAGGGCCGGGAAATATGCACAAAGAGACTTGAGGCAGGTGCCATGACCCATATGCAAAGGGACGGACACAGGGCC |
Ccr5 |
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| Ccr7 |
NM_007719.2 |
755-855 |
CCCAGATGGTTTTTGGGTTCCTAGTGCCTATGCTGGCTATGAGTTTCTGCTACCTCATTATCATCCGTACCTTGCTCCAGGCACGCAACTTTGAGCGGAA |
Ccr7 |
|
| Ccr8 |
NM_007720.2 |
426-526 |
GTTCTTCATCACCCTAATGAGTGTGGACAGGTATCTGGCTATTGTCCACGCTGTCTATGCCATCAAGGTGAGGACGGCCAGCGTGGGCACAGCCCTGAGT |
Ccr8 |
|
| Cd200r1 |
NM_021325.3 |
1090-1190 |
AAGCTACTTCAGCTATTGAGGAGGATGAAATGCAGCCTTATGCTAGCTATACAGAGAAGAGCAATCCACTCTATGATACTGTGACTAAGGTGGAGGCATT |
Cd200r1 |
|
| Cd226 |
NM_001039149.1 |
733-833 |
GAGACGGAGACAGGTGAGAATTCCACTTAAAGAGCCCAGGGATAAACAGAGTAAGGTAGCCACCAACTGCAGAAGTCCTACTTCTCCCATCCAGTCTACA |
Cd226 |
|
| Cd3e |
NM_007648.4 |
380-480 |
TGAGTACTGTGTGGAGGTGGACCTGACAGCAGTAGCCATAATCATCATTGTTGACATCTGTATCACTCTGGGCTTGCTGATGGTCATTTATTACTGGAGC |
Cd3e |
|
| Cd4 |
NM_013488.2 |
950-1050 |
AAGAGGTGTCCGTACAAAAGTCCACCAAAGACCTCAAGCTCCAGCTGAAGGAAACGCTCCCACTCACCCTCAAGATACCCCAGGTCTCGCTTCAGTTTGC |
Cd4 |
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Total number of rows: 199
Table truncated, full table size 26 Kbytes.
| Supplementary data files not provided |
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