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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 24, 2018 |
| Title |
NextSeq 550 (Rattus norvegicus) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Rattus norvegicus |
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| Submission date |
May 24, 2018 |
| Last update date |
May 24, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (989)
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GSM3154158, GSM3154159, GSM3164326, GSM3164327, GSM3164328, GSM3164329
GSM3164330, GSM3164331, GSM3164332, GSM3164333, GSM3164334, GSM3164335, GSM3164336, GSM3164337, GSM3164338, GSM3164339, GSM3164340, GSM3354663, GSM3354664, GSM3354665, GSM3354666, GSM3354667, GSM3354668, GSM3354669, GSM3354670, GSM3354671, GSM3354672, GSM3354673, GSM3354674, GSM3354675, GSM3354676, GSM3354677, GSM3354678, GSM3354679, GSM3354680, GSM3354681, GSM3354682, GSM3354683, GSM3354684, GSM3354685, GSM3354686, GSM3354687, GSM3354688, GSM3354689, GSM3354690, GSM3354691, GSM3354692, GSM3354693, GSM3354694, GSM3354695, GSM3354696, GSM3354697, GSM3354698, GSM3354699, GSM3354700, GSM3354701, GSM3354702, GSM3354703, GSM3354704, GSM3354705, GSM3354706, GSM3354707, GSM3354708, GSM3354709, GSM3354710, GSM3354711, GSM3354712, GSM3354713, GSM3354714, GSM3354715, GSM3354716, GSM3354717, GSM3354718, GSM3354719, GSM3354720, GSM3354721, GSM3354722, GSM3354723, GSM3354724, GSM3354725, GSM3382172, GSM3382173, GSM3382174, GSM3382175, GSM3382176, GSM3382177, GSM3382178, GSM3382179, GSM3382180, GSM3382181, GSM3382182, GSM3578973, GSM3578974, GSM3578975, GSM3578976, GSM3578977, GSM3578978, GSM3578979, GSM3578980, GSM3578981, GSM3723398, GSM3723399, GSM3723400, GSM3723401, GSM3723402, GSM3723403, GSM3723404, GSM3723405, GSM3723406, GSM3723407, GSM3723408, GSM3723409, GSM3723410, GSM3723411, GSM3723412, GSM3723413, GSM3723414, GSM3723415, GSM3723416, GSM3723417, GSM3723418, GSM3723419, GSM3723420, GSM3723421, GSM3723422, GSM3723423, GSM3723816, GSM3723817, GSM3723818, GSM3723819, GSM3723820, GSM3723821, GSM3723822, GSM3723823, GSM3723824, GSM3723825, GSM3723826, GSM3723827, GSM3723828, GSM3723829, GSM3723830, GSM3723831, GSM3723832, GSM3723833, GSM3814284, GSM3814285, GSM3814286, GSM3814287, GSM3814288, GSM3814289, GSM3814290, GSM3814291, GSM3814292, GSM3814293, GSM3814294, GSM3814295, GSM3814296, GSM3814297, GSM3814298, GSM3814299, GSM3814300, GSM3814301, GSM3814302, GSM3814303, GSM3814304, GSM3814305, GSM3814306, GSM3814307, GSM3814308, GSM3814309, GSM3814310, GSM3814311, GSM3814312, GSM3814313, GSM3814314, GSM3814315, GSM3814316, GSM3814317, GSM3814318, GSM3814319, GSM3814320, GSM3814321, GSM3814322, GSM3814323, GSM3814324, GSM3814325, GSM3814326, GSM3814327, GSM3814328, GSM3814329, GSM3814330, GSM3814331, GSM3814332, GSM3814333, GSM3814334, GSM3814335, GSM3814336, GSM3814337, GSM3814338, GSM3814339, GSM4211242, GSM4211243, GSM4211244, GSM4211245, GSM4211246, GSM4211247, GSM4211248, GSM4211249, GSM4211250, GSM4211251, GSM4211252, GSM4211253, GSM4211254, GSM4211255, GSM4211256, GSM4211257, GSM4523194, GSM4523195, GSM4523196, GSM4523197, GSM4523198, GSM4523199, GSM4523200, GSM4523201, GSM4523202, GSM4523203, GSM4523204, GSM4523205, GSM4523206, GSM4523207, GSM4523208, GSM4523209, GSM4523210, GSM4523211, GSM4523212, GSM4523213, GSM4523214, GSM4523215, GSM4523216, GSM4523217, GSM4523218, GSM4523219, GSM4523220, GSM4523221, GSM4523222, GSM4523223, GSM4523224, GSM4523225, GSM4523226, GSM4523227, GSM4637280, GSM4637281, GSM4637282, GSM4637283, GSM4643835, GSM4643836, GSM4643837, GSM4643838, GSM4643839, GSM4643840, GSM4643841, GSM4643842, GSM4643843, GSM4643844, GSM4643845, GSM4643846, GSM4648339, GSM4648340, GSM4648341, GSM4648342, GSM4648343, GSM4648344, GSM4648345, GSM4648346, GSM4648347, GSM4648348, GSM4648349, GSM4648350, GSM4648351, GSM4648352, GSM4648353, GSM4648354, GSM4648355, GSM4648356, GSM4648357, GSM4648358, GSM4648359, GSM4648360, GSM4648361, GSM4648362, GSM4648363, GSM4648364, GSM4648365, GSM4648366, GSM4648367, GSM4648368, GSM4648369, GSM4648370, GSM4648371, GSM4648372, GSM4648373, GSM4648374, GSM4672964, GSM4672965, GSM4672966, GSM4672967, GSM4672968, GSM4672969, GSM4672970, GSM4672971, GSM4672972, GSM4672973, GSM4672974, GSM4672975, GSM4672976, GSM4672977, GSM4672978, GSM4672979, GSM4672980, GSM4672981, GSM4672982, GSM4672983, GSM4672984, GSM4672985, GSM4672986, GSM4672987, GSM4672988, GSM4672989, GSM4672990, GSM4672991, GSM4672992, GSM4672993, GSM4672994, GSM4672995, GSM4672996, GSM4672997, GSM4672998, GSM4672999, GSM4780808, GSM4780809, GSM4780810, GSM4780811, GSM4780812, GSM4780813, GSM4780814, GSM4780815, GSM4780816, GSM4817312, GSM4817313, GSM4817314, GSM4817315, GSM4817316, GSM4817317, GSM4817318, GSM4817319, GSM4817320, GSM4817321, GSM4817322, GSM4817323, GSM4817324, GSM4817325, GSM4817326, GSM4817327, GSM4817328, GSM4817329, GSM4817330, GSM4830017, GSM4830018, GSM4832520, GSM4832521, GSM4832522, GSM4832523, GSM4832524, GSM4832525, GSM4832526, GSM4832527, GSM4832528, GSM4832529, GSM4832530, GSM4832531, GSM4832532, GSM4832533, GSM4832534, GSM4832535, GSM4832536, GSM4832537, GSM5100377, GSM5100378, GSM5100465, GSM5100466, GSM5266848, GSM5266849, GSM5266850, GSM5266851, GSM5266852, GSM5266853, GSM5266854, GSM5266855, GSM5266856, GSM5266857, GSM5266858, GSM5266859, GSM5266860, GSM5266861, GSM5266862, GSM5266863, GSM5266864, GSM5266865, GSM5266866, GSM5266867, GSM5266868, GSM5266869, GSM5266870, GSM5266871, GSM5291069, GSM5291070, GSM5291071, GSM5291072, GSM5291073, GSM5291074, GSM5291075, GSM5291076, GSM5291077, GSM5291078, GSM5291079, GSM5291080, GSM5291081, GSM5291082, GSM5291083, GSM5291084, GSM5291085, GSM5291086, GSM5291087, GSM5291088, GSM5291089, GSM5291090, GSM5291091, GSM5291092, GSM5291093, GSM5291094, GSM5291095, GSM5291096, GSM5291097, GSM5291098, GSM5291099, GSM5291100, GSM5291101, GSM5291102, GSM5291103, GSM5291104, GSM5291105, GSM5291106, GSM5291107, GSM5291108, GSM5291109, GSM5291110, GSM5291111, GSM5291112, GSM5291113, GSM5291114, GSM5291115, GSM5291116, GSM5543439, GSM5543440, GSM5694321, GSM5694322, GSM5694323, GSM5694324, GSM5694325, GSM5694326, GSM5718066, GSM5718067, GSM5718068, GSM5718069, GSM5718070, GSM5718071, GSM5718072, GSM5718073, GSM5908355, GSM5908359, GSM5908361, GSM5908368, GSM5908370, GSM5908372, GSM5908381, GSM5908389, GSM5908396, GSM5908398, GSM5908400, GSM5908402, GSM5908409, GSM5908418, GSM5908423, GSM5908427, GSM5908429, GSM5908432, GSM5908436, GSM5908443, GSM5908448, GSM5908451...
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You can also download a list of all accessions here
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| Series (53)
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| GSE114896 |
seekCRIT: detecting and characterizing differentially expressed circular RNAs using high-throughput sequencing data |
| GSE115067 |
Integrated systems analysis reveals conserved gene networks underlying response to spinal cord injury |
| GSE118956 |
TempO-Seq S1500+ Platform Gene Expression of Rat Liver Mode of Action Samples |
| GSE119754 |
Transcriptomic Signature of Right Ventricular Failure in Experimental Pulmonary Arterial Hypertension: Deep Sequencing Demonstrates Mitochondrial, Fibrotic, Inflammatory and Angiogenic Abnormalities |
| GSE125619 |
Regulation of Macrophage Foam Cell Formation during Nitrogen Mustard (NM)-Induced Pulmonary Fibrosis by Lung Lipids |
| GSE129848 |
Prenatal hypoxia exposure induced methylomic and transcriptomic alterations in rat hearts [RNA-seq] |
| GSE129874 |
Prenatal hypoxia exposure induced methylomic and transcriptomic alterations in rat hearts [BiSulfite-seq] |
| GSE129876 |
Prenatal hypoxia exposure induced methylomic and transcriptomic alterations in rat hearts |
| GSE131704 |
microRNA expression in rat hippocampus up to 1 year after fluid percussion brain injury |
| GSE141699 |
Transcriptional Alterations of Genes Related to Fertility Decline in Male rats Induced by Chronic Sleep Restriction |
| GSE148174 |
Direct Formalin Fixation Induces Widespread Transcriptomic Effects in Archival Tissue Samples |
| GSE150091 |
The gut microbiome regulates memory function. |
| GSE153275 |
Identification of dynamic RNA-binding proteins uncovers key regulators of gene expression in diseased cardiomyocytes |
| GSE153409 |
Identification of Cpeb4 binders in cardiomyocyte |
| GSE154533 |
Zonation of pancreatic acinar cells in diabetic mice |
| GSE157919 |
Captopril treatment in rats with DEN-induced cirrhosis and hepatocellular carcinoma |
| GSE159011 |
Plasma miR-9-3p and miR-136-3p levels as novel diagnostic biomarkers for mild traumatic brain injury |
| GSE159452 |
scRNAseq analysis from mixed cell culture from rat optic nerve |
| GSE159563 |
A holistic systems approach to characterize the impact of pre- and post-natal oxycodone exposure on neurodevelopment and behavior |
| GSE167253 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [ChIP-seq] |
| GSE167257 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair [SAR-seq] |
| GSE167259 |
Neuronal Enhancers are Hotspots for DNA Single-Strand Break Repair |
| GSE173380 |
Illumina NGS RNA-seq and RRBS Sequencing on Rat Kidney |
| GSE174289 |
Early molecular events mediating loss of aquaporin-2 in kidney collecting duct during ureteral obstruction |
| GSE182933 |
Time-restricted feeding prevents deleterious metabolic effects of circadian disruption through epigenetic control of β-cell function [ChIPseq] |
| GSE182938 |
Time-restricted feeding prevents deleterious metabolic effects of circadian disruption through epigenetic control of β-cell function |
| GSE189080 |
Differential Expression Profile of MicroRNAs and Tight Junction in Lung Tissue of Rat with Mitomycin-C Induced Pulmonary Veno-Occlusive Disease |
| GSE190203 |
Gut microbial metabolite trimethylamine N-oxide aggravates pulmonary hypertension |
| GSE197097 |
Transcriptomic profiling of diabetic rats treated with peripherical focused ultrasound (pFUS) |
| GSE198008 |
Young CSF restores oligodendrogenesis and memory in aged mice via Fgf17 |
| GSE198237 |
scRNAseq RAT DIA WT and DMD 12months |
| GSE200928 |
Transcriptomic Changes in Microdissected CCDs after Three Hours Lipopolysaccharide (LPS) Administration in Rats |
| GSE201117 |
Increased risk of mammary cancer recurrence in socially isolated rats is linked to upregulation of IL6/JAK/STAT3 and inhibition of oxidative phosphorylation signaling, activities blocked by the herbal mixture Jaeumganghwa-tang |
| GSE201231 |
Effect of anti-osteoporotic treatments on circulating and bone microRNA patterns in osteopenic ZDF ratsEffect of anti-osteoporotic treatments on circulating and bone microRNA patterns in osteopenic ZDF rats |
| GSE201263 |
Dual RNA-seq reveals a type 6 secretion system-dependent blockage of TNF-alpha signaling and BicA as a Burkholderia pseudomallei virulence factor important during gastrointestinal infection |
| GSE201888 |
Activation of NOTCH and BMP signaling pathways during acute hypoxic stress in cardiac mesenchymal cells |
| GSE203412 |
An early islet transcriptional signature drives local inflammation in autoimmune diabetes |
| GSE205629 |
scRNAseq RAT TA and EOMs WT and DMD 12months |
| GSE212589 |
Early life low-calorie sweetener consumption disrupts glucose regulation, sugar-motivated behavior, and memory function in rats |
| GSE216946 |
Fetal hypoxia results in sex- and cell type-specific alterations in postnatal transcription in rat oligodendrocyte precursor cells, microglia, neurons, and oligodendrocytes |
| GSE221957 |
Fatty acid binding protein 5 inhibition attenuates pronociceptive cytokine/chemokine expression and suppresses osteoarthritis pain: A comparative human and rat study |
| GSE230066 |
Spinal Cord Injury regulates circular mRNA expression in axons |
| GSE232953 |
Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair [Cut&Run] |
| GSE232956 |
Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair |
| GSE233158 |
snRNAseq RAT HEART WT BMD and DMD 12months |
| GSE237234 |
Effect of vitamin D supplementation on rats' liver |
| GSE241559 |
SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination (ChIP-Seq) |
| GSE241561 |
SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination |
| GSE242310 |
Cellular senescence in hyperoxic neonatal rat lung |
| GSE247256 |
Prenatal alcohol exposure alters expression of genes involved in cell adhesion, immune response, and toxin metabolism in adolescent rat hippocampus |
| GSE247311 |
From computer simulation to therapeutic potential: ETA53 for myocardial infarction |
| GSE263314 |
Intratracheal instillation of quaternary ammonium compounds in rats |
| GSE278792 |
Maternal e-cigarette exposure alters DNA methylome, site-specific CpG and CH methylation, and transcriptomic signatures in the neonatal brain |
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| Supplementary data files not provided |
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