Data table |
ID |
seqname |
strand |
start |
stop |
total_probes |
gene_assignment |
mrna_assignment |
swissprot |
unigene |
GO_biological_process |
GO_cellular_component |
GO_molecular_function |
protein_domains |
crosshyb_type |
category |
SPOT_ID |
19724254 |
chr1 |
+ |
20484 |
29378 |
25 |
XM_002708152 // WDR31 // WD repeat domain 31 // --- // 100345553 /// XM_008261098 // WDR31 // WD repeat domain 31 // --- // 100345553 /// XM_008262036 // WDR31 // WD repeat domain 31 // --- // 100345553 /// XM_008262499 // WDR31 // WD repeat domain 31 // --- // 100345553 /// ENSOCUT00000014253 // WDR31 // WD repeat domain 31 // --- // 100345553 |
"XM_002708152 // RefSeq // PREDICTED: Oryctolagus cuniculus WD repeat domain 31 (WDR31), transcript variant X2, mRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// XM_008261098 // RefSeq // PREDICTED: Oryctolagus cuniculus WD repeat domain 31 (WDR31), transcript variant X1, mRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// XM_008262036 // RefSeq // PREDICTED: Oryctolagus cuniculus WD repeat domain 31 (WDR31), transcript variant X3, mRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// XM_008262499 // RefSeq // PREDICTED: Oryctolagus cuniculus WD repeat domain 31 (WDR31), transcript variant X4, mRNA. // chr1 // 100 // 76 // 19 // 19 // 0 /// ENSOCUT00000014253 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:11369:33974:1 gene:ENSOCUG00000014251 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000006931 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:7796:29378:1 transcript_biotype:protein_coding // chr1 // 100 // 72 // 18 // 18 // 0" |
XM_008262036 // G1T710 /// ENSOCUT00000014253 // G1T710 |
--- |
--- |
--- |
ENSOCUT00000014253 // GO:0005515 // protein binding // inferred from electronic annotation |
ENSOCUT00000014253 // Pfam // IPR001680 // WD40 repeat /// ENSOCUT00000014253 // Pfam // IPR001680 // WD40 repeat /// ENSOCUT00000014253 // Pfam // IPR001680 // WD40 repeat /// ENSOCUT00000014253 // Pfam // IPR001680 // WD40 repeat /// ENSOCUT00000014253 // Pfam // IPR001680 // WD40 repeat |
1 |
main |
transcript_cluster_id: 19724254 |
19724264 |
chr1 |
+ |
52453 |
53037 |
22 |
XM_008263244 // RNF183 // ring finger protein 183 // --- // 100352371 /// XM_008263668 // RNF183 // ring finger protein 183 // --- // 100352371 /// XM_008264161 // RNF183 // ring finger protein 183 // --- // 100352371 /// XM_008264727 // RNF183 // ring finger protein 183 // --- // 100352371 /// XM_008265281 // RNF183 // ring finger protein 183 // --- // 100352371 /// ENSOCUT00000005053 // RNF183 // ring finger protein 183 // --- // 100352371 |
"XM_008263244 // RefSeq // PREDICTED: Oryctolagus cuniculus ring finger protein 183 (RNF183), transcript variant X1, mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// XM_008263668 // RefSeq // PREDICTED: Oryctolagus cuniculus ring finger protein 183 (RNF183), transcript variant X2, mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// XM_008264161 // RefSeq // PREDICTED: Oryctolagus cuniculus ring finger protein 183 (RNF183), transcript variant X3, mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// XM_008264727 // RefSeq // PREDICTED: Oryctolagus cuniculus ring finger protein 183 (RNF183), transcript variant X4, mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// XM_008265281 // RefSeq // PREDICTED: Oryctolagus cuniculus ring finger protein 183 (RNF183), transcript variant X5, mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// ENSOCUT00000005053 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:52453:53037:1 gene:ENSOCUG00000005054 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 22 // 22 // 0 /// GENSCAN00000006928 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:48282:53037:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 22 // 22 // 0" |
XM_008263668 // G1SN41 /// XM_008264161 // G1SN41 /// XM_008264727 // G1SN41 /// XM_008265281 // G1SN41 /// ENSOCUT00000005053 // G1SN41 |
--- |
--- |
XM_008263668 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008263668 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008264161 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008264161 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008264727 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008264727 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008265281 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008265281 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000005053 // GO:0016020 // membrane // inferred from electronic annotation /// ENSOCUT00000005053 // GO:0016021 // integral component of membrane // inferred from electronic annotation |
XM_008263668 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// XM_008263668 // GO:0046872 // metal ion binding // inferred from electronic annotation /// XM_008264161 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// XM_008264161 // GO:0046872 // metal ion binding // inferred from electronic annotation /// XM_008264727 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// XM_008264727 // GO:0046872 // metal ion binding // inferred from electronic annotation /// XM_008265281 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// XM_008265281 // GO:0046872 // metal ion binding // inferred from electronic annotation /// ENSOCUT00000005053 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSOCUT00000005053 // GO:0046872 // metal ion binding // inferred from electronic annotation /// ENSOCUT00000005053 // GO:0008270 // zinc ion binding // inferred from electronic annotation |
--- |
1 |
main |
transcript_cluster_id: 19724264 |
19724266 |
chr1 |
+ |
75200 |
85751 |
21 |
XM_002708139 // CDC26 // cell division cycle 26 // --- // 100358835 /// XM_008267199 // CDC26 // cell division cycle 26 // --- // 100358835 /// ENSOCUT00000005041 // CDC26 // cell division cycle 26 // --- // 100358835 |
"XM_002708139 // RefSeq // PREDICTED: Oryctolagus cuniculus cell division cycle 26 (CDC26), transcript variant X1, mRNA. // chr1 // 100 // 100 // 21 // 21 // 0 /// XM_008267199 // RefSeq // PREDICTED: Oryctolagus cuniculus cell division cycle 26 (CDC26), transcript variant X2, mRNA. // chr1 // 100 // 100 // 21 // 21 // 0 /// ENSOCUT00000005041 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:75200:85748:1 gene:ENSOCUG00000005044 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 21 // 21 // 0 /// GENSCAN00000006944 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:77758:85501:1 transcript_biotype:protein_coding // chr1 // 100 // 33 // 7 // 7 // 0" |
XM_002708139 // G1SN34 /// XM_008267199 // G1SN34 /// ENSOCUT00000005041 // G1SN34 |
XM_002708139 // Ocu.3654 // eye /// XM_008267199 // Ocu.3654 // eye /// ENSOCUT00000005041 // Ocu.3654 // eye |
XM_002708139 // GO:0030071 // regulation of mitotic metaphase/anaphase transition // inferred from electronic annotation /// XM_002708139 // GO:0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// XM_002708139 // GO:0070979 // protein K11-linked ubiquitination // inferred from electronic annotation /// XM_008267199 // GO:0030071 // regulation of mitotic metaphase/anaphase transition // inferred from electronic annotation /// XM_008267199 // GO:0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// XM_008267199 // GO:0070979 // protein K11-linked ubiquitination // inferred from electronic annotation /// ENSOCUT00000005041 // GO:0030071 // regulation of mitotic metaphase/anaphase transition // inferred from electronic annotation /// ENSOCUT00000005041 // GO:0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// ENSOCUT00000005041 // GO:0070979 // protein K11-linked ubiquitination // inferred from electronic annotation |
XM_002708139 // GO:0005680 // anaphase-promoting complex // inferred from electronic annotation /// XM_008267199 // GO:0005680 // anaphase-promoting complex // inferred from electronic annotation /// ENSOCUT00000005041 // GO:0005680 // anaphase-promoting complex // inferred from electronic annotation |
ENSOCUT00000005041 // GO:0005515 // protein binding // inferred from electronic annotation |
"ENSOCUT00000005041 // Pfam // IPR018860 // Anaphase-promoting complex, subunit CDC26" |
1 |
main |
transcript_cluster_id: 19724266 |
19724272 |
chr1 |
+ |
126038 |
175183 |
23 |
"XM_008255342 // FKBP15 // FK506 binding protein 15, 133kDa // --- // 100349460" |
"XM_008255342 // RefSeq // PREDICTED: Oryctolagus cuniculus FK506 binding protein 15, 133kDa (FKBP15), mRNA. // chr1 // 100 // 100 // 23 // 23 // 0 /// ENSOCUT00000005032 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:126038:162795:1 gene:ENSOCUG00000005028 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 65 // 15 // 15 // 0 /// GENSCAN00000006936 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:126038:175183:1 transcript_biotype:protein_coding // chr1 // 100 // 87 // 20 // 20 // 0" |
ENSOCUT00000005032 // G1SN26 |
--- |
ENSOCUT00000005032 // GO:0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0006457 // protein folding // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0010923 // negative regulation of phosphatase activity // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0008152 // metabolic process // inferred from electronic annotation |
ENSOCUT00000005032 // GO:0016020 // membrane // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0005884 // actin filament // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0030424 // axon // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0030426 // growth cone // inferred from electronic annotation |
ENSOCUT00000005032 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// ENSOCUT00000005032 // GO:0016853 // isomerase activity // inferred from electronic annotation |
ENSOCUT00000005032 // Pfam // IPR001179 // FKBP-type peptidyl-prolyl cis-trans isomerase domain |
1 |
main |
transcript_cluster_id: 19724272 |
19724300 |
chr1 |
+ |
330620 |
343258 |
13 |
XM_008269348 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008269772 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008270278 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008270801 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008271305 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008271830 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 /// XM_008272309 // ZFP37 // ZFP37 zinc finger protein // --- // 100345294 |
"XM_008269348 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X1, mRNA. // chr1 // 100 // 100 // 13 // 13 // 0 /// XM_008269772 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X2, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// XM_008270278 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X3, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// XM_008270801 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X4, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// XM_008271305 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X5, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// XM_008271830 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X6, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// XM_008272309 // RefSeq // PREDICTED: Oryctolagus cuniculus ZFP37 zinc finger protein (ZFP37), transcript variant X7, mRNA. // chr1 // 100 // 62 // 8 // 8 // 0 /// ENSOCUT00000034129 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:341708:343258:1 gene:ENSOCUG00000029203 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 31 // 4 // 4 // 0 /// GENSCAN00000006946 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:330557:355419:1 transcript_biotype:protein_coding // chr1 // 100 // 69 // 9 // 9 // 0" |
ENSOCUT00000034129 // U3KPL8 |
--- |
--- |
--- |
ENSOCUT00000034129 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// ENSOCUT00000034129 // GO:0046872 // metal ion binding // inferred from electronic annotation |
"ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2 /// ENSOCUT00000034129 // Pfam // IPR007087 // Zinc finger, C2H2" |
1 |
main |
transcript_cluster_id: 19724300 |
19724305 |
chr1 |
+ |
367395 |
372458 |
27 |
--- |
"ENSOCUT00000025645 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:367324:372684:1 gene:ENSOCUG00000026544 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 27 // 27 // 0 /// GENSCAN00000006942 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:367457:468021:1 transcript_biotype:protein_coding // chr1 // 100 // 41 // 11 // 11 // 0 /// FR874845 // GenBank // Oryctolagus cuniculus partial mRNA for lipocalin allergen Ory c 4 precursor (lcn gene). // chr1 // 100 // 85 // 23 // 23 // 0 /// NM_001171048 // RefSeq // Oryctolagus cuniculus cytochrome P450 2A11 (CYP2A11), mRNA. // chr1 // 48 // 48 // 13 // 27 // 1 /// L10237 // GenBank // Oryctolagus cuniculus cytochrome P-450 IIA11 (cyp2A11) mRNA, complete cds. // chr1 // 48 // 48 // 13 // 27 // 1" |
ENSOCUT00000025645 // G1U400 /// FR874845 // U6C8D6 |
--- |
ENSOCUT00000025645 // GO:0006810 // transport // inferred from electronic annotation /// FR874845 // GO:0006810 // transport // inferred from electronic annotation |
ENSOCUT00000025645 // GO:0005576 // extracellular region // inferred from electronic annotation /// FR874845 // GO:0005576 // extracellular region // inferred from electronic annotation |
ENSOCUT00000025645 // GO:0005215 // transporter activity // inferred from electronic annotation /// ENSOCUT00000025645 // GO:0005550 // pheromone binding // inferred from electronic annotation /// ENSOCUT00000025645 // GO:0036094 // small molecule binding // inferred from electronic annotation /// FR874845 // GO:0005215 // transporter activity // inferred from electronic annotation /// FR874845 // GO:0005550 // pheromone binding // inferred from electronic annotation /// FR874845 // GO:0036094 // small molecule binding // inferred from electronic annotation |
ENSOCUT00000025645 // Pfam // IPR000566 // Lipocalin/cytosolic fatty-acid binding domain |
1 |
main |
transcript_cluster_id: 19724305 |
19724314 |
chr1 |
+ |
456516 |
465848 |
20 |
"XM_002707955 // SLC46A2 // solute carrier family 46, member 2 // --- // 100357705 /// ENSOCUT00000009837 // SLC46A2 // solute carrier family 46, member 2 // --- // 100357705" |
"XM_002707955 // RefSeq // PREDICTED: Oryctolagus cuniculus solute carrier family 46, member 2 (SLC46A2), mRNA. // chr1 // 100 // 100 // 20 // 20 // 0 /// ENSOCUT00000009837 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:456317:467089:1 gene:ENSOCUG00000009840 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 20 // 20 // 0 /// GENSCAN00000006942 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:367457:468021:1 transcript_biotype:protein_coding // chr1 // 100 // 85 // 17 // 17 // 0" |
XM_002707955 // G1SY07 /// ENSOCUT00000009837 // G1SY07 |
--- |
XM_002707955 // GO:0043029 // T cell homeostasis // inferred from electronic annotation /// XM_002707955 // GO:0045580 // regulation of T cell differentiation // inferred from electronic annotation /// XM_002707955 // GO:0048538 // thymus development // inferred from electronic annotation /// XM_002707955 // GO:0055085 // transmembrane transport // inferred from electronic annotation /// XM_002707955 // GO:0070233 // negative regulation of T cell apoptotic process // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0043029 // T cell homeostasis // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0045580 // regulation of T cell differentiation // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0048538 // thymus development // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0055085 // transmembrane transport // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0070233 // negative regulation of T cell apoptotic process // inferred from electronic annotation |
XM_002707955 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_002707955 // GO:0016020 // membrane // inferred from electronic annotation /// XM_002707955 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0009986 // cell surface // inferred from electronic annotation /// ENSOCUT00000009837 // GO:0016020 // membrane // inferred from electronic annotation |
--- |
ENSOCUT00000009837 // Pfam // IPR011701 // Major facilitator superfamily |
1 |
main |
transcript_cluster_id: 19724314 |
19724319 |
chr1 |
+ |
633855 |
650614 |
22 |
XM_002707972 // INIP // INTS3 and NABP interacting protein // --- // 100344197 /// ENSOCUT00000016719 // INIP // INTS3 and NABP interacting protein // --- // 100344197 |
"XM_002707972 // RefSeq // PREDICTED: Oryctolagus cuniculus INTS3 and NABP interacting protein (INIP), mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// ENSOCUT00000016719 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:632068:650617:1 gene:ENSOCUG00000016717 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 22 // 22 // 0" |
XM_002707972 // G1TC81 /// ENSOCUT00000016719 // G1TC81 |
--- |
XM_002707972 // GO:0006281 // DNA repair // inferred from electronic annotation /// XM_002707972 // GO:0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// XM_002707972 // GO:0010212 // response to ionizing radiation // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0006281 // DNA repair // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0006974 // cellular response to DNA damage stimulus // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0010212 // response to ionizing radiation // inferred from electronic annotation |
XM_002707972 // GO:0005634 // nucleus // inferred from electronic annotation /// XM_002707972 // GO:0005654 // nucleoplasm // inferred from electronic annotation /// XM_002707972 // GO:0070876 // SOSS complex // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0005654 // nucleoplasm // inferred from electronic annotation /// ENSOCUT00000016719 // GO:0070876 // SOSS complex // inferred from electronic annotation |
ENSOCUT00000016719 // GO:0005515 // protein binding // inferred from electronic annotation |
--- |
1 |
main |
transcript_cluster_id: 19724319 |
19724323 |
chr1 |
+ |
956327 |
1088543 |
32 |
XM_008251483 // PTBP3 // polypyrimidine tract binding protein 3 // --- // 100350707 /// ENSOCUT00000017670 // PTBP3 // polypyrimidine tract binding protein 3 // --- // 100350707 |
"XM_008251483 // RefSeq // PREDICTED: Oryctolagus cuniculus polypyrimidine tract binding protein 3 (PTBP3), mRNA. // chr1 // 96 // 81 // 25 // 26 // 0 /// ENSOCUT00000017670 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:987461:1088543:1 gene:ENSOCUG00000017670 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 78 // 25 // 25 // 0 /// GENSCAN00000036954 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1017695:1158845:1 transcript_biotype:protein_coding // chr1 // 100 // 50 // 16 // 16 // 0" |
ENSOCUT00000017670 // G1TE64 |
--- |
"ENSOCUT00000017670 // GO:0006397 // mRNA processing // inferred from electronic annotation /// ENSOCUT00000017670 // GO:0033119 // negative regulation of RNA splicing // inferred from electronic annotation /// ENSOCUT00000017670 // GO:0048025 // negative regulation of mRNA splicing, via spliceosome // inferred from electronic annotation " |
ENSOCUT00000017670 // GO:0005634 // nucleus // inferred from electronic annotation |
ENSOCUT00000017670 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// ENSOCUT00000017670 // GO:0003676 // nucleic acid binding // inferred from electronic annotation /// ENSOCUT00000017670 // GO:0003723 // RNA binding // inferred from electronic annotation /// ENSOCUT00000017670 // GO:0044822 // poly(A) RNA binding // inferred from electronic annotation |
ENSOCUT00000017670 // Pfam // IPR000504 // RNA recognition motif domain /// ENSOCUT00000017670 // Pfam // IPR000504 // RNA recognition motif domain /// ENSOCUT00000017670 // Pfam // IPR000504 // RNA recognition motif domain |
1 |
main |
transcript_cluster_id: 19724323 |
19724342 |
chr1 |
+ |
1132375 |
1273677 |
32 |
XM_008252259 // SUSD1 // sushi domain containing 1 // --- // 100350961 /// XM_008252727 // SUSD1 // sushi domain containing 1 // --- // 100350961 /// XM_008253165 // SUSD1 // sushi domain containing 1 // --- // 100350961 /// ENSOCUT00000010438 // SUSD1 // sushi domain containing 1 // --- // 100350961 |
"XM_008252259 // RefSeq // PREDICTED: Oryctolagus cuniculus sushi domain containing 1 (SUSD1), transcript variant X1, mRNA. // chr1 // 100 // 75 // 24 // 24 // 0 /// XM_008252727 // RefSeq // PREDICTED: Oryctolagus cuniculus sushi domain containing 1 (SUSD1), transcript variant X2, mRNA. // chr1 // 100 // 69 // 22 // 22 // 0 /// XM_008253165 // RefSeq // PREDICTED: Oryctolagus cuniculus sushi domain containing 1 (SUSD1), transcript variant X3, mRNA. // chr1 // 100 // 81 // 26 // 26 // 0 /// ENSOCUT00000010438 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:1131690:1277068:1 gene:ENSOCUG00000010435 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 81 // 26 // 26 // 0 /// GENSCAN00000036954 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1017695:1158845:1 transcript_biotype:protein_coding // chr1 // 100 // 13 // 4 // 4 // 0 /// GENSCAN00000036959 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1194082:1282822:1 transcript_biotype:protein_coding // chr1 // 100 // 47 // 15 // 15 // 0" |
XM_008253165 // G1SZA2 /// ENSOCUT00000010438 // G1SZA2 |
--- |
--- |
XM_008253165 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008253165 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000010438 // GO:0016020 // membrane // inferred from electronic annotation /// ENSOCUT00000010438 // GO:0016021 // integral component of membrane // inferred from electronic annotation |
XM_008253165 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// ENSOCUT00000010438 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSOCUT00000010438 // GO:0005509 // calcium ion binding // inferred from electronic annotation |
ENSOCUT00000010438 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000010438 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000010438 // Pfam // IPR001881 // EGF-like calcium-binding domain /// ENSOCUT00000010438 // Pfam // IPR001881 // EGF-like calcium-binding domain |
1 |
main |
transcript_cluster_id: 19724342 |
19724361 |
chr1 |
+ |
1414059 |
1414180 |
8 |
--- |
ENSOCUT00000018077 // ENSEMBL // ncrna:novel chromosome:OryCun2.0:1:1414059:1414180:1 gene:ENSOCUG00000018077 gene_biotype:rRNA transcript_biotype:rRNA // chr1 // 100 // 100 // 8 // 8 // 0 |
--- |
--- |
--- |
--- |
--- |
--- |
1 |
main |
transcript_cluster_id: 19724361 |
19724363 |
chr1 |
+ |
1524133 |
1616043 |
22 |
"XM_008254324 // C1H9orf84 // chromosome 1 open reading frame, human C9orf84 // --- // 100351968 /// ENSOCUT00000016295 // C1H9orf84 // chromosome 1 open reading frame, human C9orf84 // --- // 100351968" |
"XM_008254324 // RefSeq // PREDICTED: Oryctolagus cuniculus chromosome 1 open reading frame, human C9orf84 (C1H9orf84), mRNA. // chr1 // 100 // 95 // 21 // 21 // 0 /// ENSOCUT00000016295 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:1524133:1617015:1 gene:ENSOCUG00000016284 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 95 // 21 // 21 // 0 /// GENSCAN00000001531 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1530677:1621721:1 transcript_biotype:protein_coding // chr1 // 100 // 45 // 10 // 10 // 0" |
ENSOCUT00000016295 // G1TBC2 |
--- |
--- |
--- |
--- |
--- |
1 |
main |
transcript_cluster_id: 19724363 |
19724390 |
chr1 |
+ |
1683371 |
1683796 |
25 |
XM_002708036 // LOC100346767 // nuclear nucleic acid-binding protein C1D // --- // 100346767 |
"XM_002708036 // RefSeq // PREDICTED: Oryctolagus cuniculus nuclear nucleic acid-binding protein C1D (LOC100346767), mRNA. // chr1 // 100 // 100 // 25 // 25 // 0 /// ENSOCUT00000026517 // ENSEMBL // ensembl:known chromosome:OryCun2.0:1:1683371:1683796:1 gene:ENSOCUG00000025587 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 25 // 25 // 0 /// GENSCAN00000001529 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1674053:1683796:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 25 // 25 // 0 /// XM_002709830 // RefSeq // PREDICTED: Oryctolagus cuniculus C1D nuclear receptor corepressor (C1D), transcript variant X2, mRNA. // chr1 // 100 // 100 // 25 // 25 // 1 /// XM_008254321 // RefSeq // PREDICTED: Oryctolagus cuniculus C1D nuclear receptor corepressor (C1D), transcript variant X1, mRNA. // chr1 // 100 // 100 // 25 // 25 // 1 /// ENSOCUT00000009766 // ENSEMBL // ensembl:known chromosome:OryCun2.0:2:118061383:118077647:1 gene:ENSOCUG00000009771 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 25 // 25 // 1 /// GENSCAN00000033907 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:2:118054055:118077647:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 25 // 25 // 1 /// ENSOCUT00000023674 // ENSEMBL // ensembl:novel chromosome:OryCun2.0:X:52289619:52290042:1 gene:ENSOCUG00000024276 gene_biotype:pseudogene transcript_biotype:pseudogene // chr1 // 68 // 68 // 17 // 25 // 1 /// GENSCAN00000010573 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:X:52273642:52355757:1 transcript_biotype:protein_coding // chr1 // 64 // 64 // 16 // 25 // 1 /// GENSCAN00000025293 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:20:5469817:5667123:1 transcript_biotype:protein_coding // chr1 // 56 // 56 // 14 // 25 // 1" |
XM_002708036 // G1TS88 /// ENSOCUT00000026517 // G1TS88 |
--- |
--- |
--- |
--- |
ENSOCUT00000026517 // Pfam // IPR007146 // Sas10/Utp3/C1D |
3 |
main |
transcript_cluster_id: 19724390 |
19724392 |
chr1 |
+ |
1704767 |
1724495 |
10 |
NM_001082702 // PTGR1 // prostaglandin reductase 1 // --- // 100009440 /// Z34285 // PTGR1 // prostaglandin reductase 1 // --- // 100009440 |
"NM_001082702 // RefSeq // Oryctolagus cuniculus prostaglandin reductase 1 (PTGR1), mRNA. // chr1 // 90 // 100 // 9 // 10 // 0 /// Z34285 // GenBank // O.cuniculus (AdRab-F) mRNA expressed in adult intestine. // chr1 // 90 // 100 // 9 // 10 // 0 /// ENSOCUT00000030973 // ENSEMBL // ensembl:known chromosome:OryCun2.0:1:1704767:1724892:1 gene:ENSOCUG00000022867 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 10 // 10 // 0 /// GENSCAN00000001540 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1714417:1753777:1 transcript_biotype:protein_coding // chr1 // 100 // 20 // 2 // 2 // 0" |
NM_001082702 // Q28719 /// Z34285 // Q28719 /// ENSOCUT00000030973 // G1TNX7 |
NM_001082702 // Ocu.2102 // --- /// Z34285 // Ocu.2102 // --- |
NM_001082702 // GO:0006693 // prostaglandin metabolic process // inferred from electronic annotation /// NM_001082702 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// Z34285 // GO:0006693 // prostaglandin metabolic process // inferred from electronic annotation /// Z34285 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation |
NM_001082702 // GO:0005737 // cytoplasm // inferred from electronic annotation /// Z34285 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0005737 // cytoplasm // inferred from electronic annotation |
NM_001082702 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// NM_001082702 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// NM_001082702 // GO:0032440 // 2-alkenal reductase [NAD(P)] activity // inferred from electronic annotation /// NM_001082702 // GO:0036132 // 13-prostaglandin reductase activity // inferred from electronic annotation /// NM_001082702 // GO:0047522 // 15-oxoprostaglandin 13-oxidase activity // inferred from electronic annotation /// Z34285 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// Z34285 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// Z34285 // GO:0032440 // 2-alkenal reductase [NAD(P)] activity // inferred from electronic annotation /// Z34285 // GO:0036132 // 13-prostaglandin reductase activity // inferred from electronic annotation /// Z34285 // GO:0047522 // 15-oxoprostaglandin 13-oxidase activity // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0032440 // 2-alkenal reductase [NAD(P)] activity // inferred from electronic annotation /// ENSOCUT00000030973 // GO:0047522 // 15-oxoprostaglandin 13-oxidase activity // inferred from electronic annotation |
"ENSOCUT00000030973 // Pfam // IPR013149 // Alcohol dehydrogenase, C-terminal" |
1 |
main |
transcript_cluster_id: 19724392 |
19724404 |
chr1 |
+ |
1728525 |
1754137 |
10 |
XM_008254615 // PTGR1 // prostaglandin reductase 1 // --- // 100352119 /// ENSOCUT00000004878 // PTGR1 // prostaglandin reductase 1 // --- // 100352119 /// ENSOCUT00000004878 // PTGR1 // prostaglandin reductase 1 // --- // 100009440 |
"XM_008254615 // RefSeq // PREDICTED: Oryctolagus cuniculus prostaglandin reductase 1 (PTGR1), mRNA. // chr1 // 88 // 80 // 7 // 8 // 0 /// ENSOCUT00000004878 // ENSEMBL // ensembl:known chromosome:OryCun2.0:1:1729460:1753835:1 gene:ENSOCUG00000004879 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 50 // 5 // 5 // 0 /// GENSCAN00000001540 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1714417:1753777:1 transcript_biotype:protein_coding // chr1 // 100 // 50 // 5 // 5 // 0" |
ENSOCUT00000004878 // G1SMQ0 /// ENSOCUT00000004878 // Q28719 |
ENSOCUT00000004878 // Ocu.2102 // --- |
ENSOCUT00000004878 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// ENSOCUT00000004878 // GO:0006693 // prostaglandin metabolic process // inferred from electronic annotation |
ENSOCUT00000004878 // GO:0005737 // cytoplasm // inferred from electronic annotation |
ENSOCUT00000004878 // GO:0016491 // oxidoreductase activity // inferred from electronic annotation /// ENSOCUT00000004878 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSOCUT00000004878 // GO:0032440 // 2-alkenal reductase [NAD(P)] activity // inferred from electronic annotation /// ENSOCUT00000004878 // GO:0047522 // 15-oxoprostaglandin 13-oxidase activity // inferred from electronic annotation /// ENSOCUT00000004878 // GO:0036132 // 13-prostaglandin reductase activity // inferred from electronic annotation |
"ENSOCUT00000004878 // Pfam // IPR013149 // Alcohol dehydrogenase, C-terminal" |
3 |
main |
transcript_cluster_id: 19724404 |
19724415 |
chr1 |
+ |
1805320 |
1923110 |
48 |
XM_008254720 // KIAA0368 // KIAA0368 ortholog // --- // 100352982 /// XM_008254753 // KIAA0368 // KIAA0368 ortholog // --- // 100352982 /// ENSOCUT00000004275 // KIAA0368 // KIAA0368 ortholog // --- // 100352982 /// ENSOCUT00000030287 // KIAA0368 // KIAA0368 ortholog // --- // 100352982 |
"XM_008254720 // RefSeq // PREDICTED: Oryctolagus cuniculus KIAA0368 ortholog (KIAA0368), transcript variant X1, mRNA. // chr1 // 100 // 90 // 43 // 43 // 0 /// XM_008254753 // RefSeq // PREDICTED: Oryctolagus cuniculus KIAA0368 ortholog (KIAA0368), transcript variant X2, mRNA. // chr1 // 100 // 90 // 43 // 43 // 0 /// ENSOCUT00000004275 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:1817814:1922962:1 gene:ENSOCUG00000004268 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 88 // 42 // 42 // 0 /// ENSOCUT00000030287 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:1831933:1923107:1 gene:ENSOCUG00000004268 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 90 // 43 // 43 // 0 /// GENSCAN00000001541 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1805320:1922962:1 transcript_biotype:protein_coding // chr1 // 95 // 79 // 36 // 38 // 0" |
ENSOCUT00000004275 // G1SLF8 /// ENSOCUT00000030287 // G1TVW9 |
XM_008254720 // Ocu.5509 // central nervous system| heart /// XM_008254753 // Ocu.5509 // central nervous system| heart /// ENSOCUT00000004275 // Ocu.5509 // central nervous system| heart /// ENSOCUT00000030287 // Ocu.5509 // central nervous system| heart |
--- |
--- |
ENSOCUT00000004275 // GO:0005488 // binding // inferred from electronic annotation /// ENSOCUT00000030287 // GO:0005488 // binding // inferred from electronic annotation |
--- |
1 |
main |
transcript_cluster_id: 19724415 |
19724471 |
chr1 |
+ |
1946349 |
1947281 |
15 |
XM_008255364 // LOC100353230 // olfactory receptor 2K2 // --- // 100353230 /// ENSOCUT00000004262 // LOC100353230 // olfactory receptor 2K2 // --- // 100353230 |
"XM_008255364 // RefSeq // PREDICTED: Oryctolagus cuniculus olfactory receptor 2K2 (LOC100353230), mRNA. // chr1 // 100 // 100 // 15 // 15 // 0 /// ENSOCUT00000004262 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:1946349:1947281:1 gene:ENSOCUG00000004267 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 15 // 15 // 0 /// GENSCAN00000001535 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:1946370:1947299:1 transcript_biotype:protein_coding // chr1 // 100 // 93 // 14 // 14 // 0" |
ENSOCUT00000004262 // G1U2B2 |
--- |
ENSOCUT00000004262 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0007608 // sensory perception of smell // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0050896 // response to stimulus // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation |
ENSOCUT00000004262 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0016020 // membrane // inferred from electronic annotation |
ENSOCUT00000004262 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// ENSOCUT00000004262 // GO:0004984 // olfactory receptor activity // inferred from electronic annotation |
"ENSOCUT00000004262 // Pfam // IPR000276 // G protein-coupled receptor, rhodopsin-like" |
1 |
main |
transcript_cluster_id: 19724471 |
19724473 |
chr1 |
+ |
2314488 |
2396390 |
17 |
XM_008254821 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 /// XM_008254885 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 /// XM_008254938 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 /// XM_008254984 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 /// XM_008255042 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 /// ENSOCUT00000026641 // LPAR1 // lysophosphatidic acid receptor 1 // --- // 100355169 |
"XM_008254821 // RefSeq // PREDICTED: Oryctolagus cuniculus lysophosphatidic acid receptor 1 (LPAR1), transcript variant X1, mRNA. // chr1 // 100 // 88 // 15 // 15 // 0 /// XM_008254885 // RefSeq // PREDICTED: Oryctolagus cuniculus lysophosphatidic acid receptor 1 (LPAR1), transcript variant X2, mRNA. // chr1 // 100 // 88 // 15 // 15 // 0 /// XM_008254938 // RefSeq // PREDICTED: Oryctolagus cuniculus lysophosphatidic acid receptor 1 (LPAR1), transcript variant X3, mRNA. // chr1 // 100 // 88 // 15 // 15 // 0 /// XM_008254984 // RefSeq // PREDICTED: Oryctolagus cuniculus lysophosphatidic acid receptor 1 (LPAR1), transcript variant X4, mRNA. // chr1 // 100 // 88 // 15 // 15 // 0 /// XM_008255042 // RefSeq // PREDICTED: Oryctolagus cuniculus lysophosphatidic acid receptor 1 (LPAR1), transcript variant X5, mRNA. // chr1 // 100 // 88 // 15 // 15 // 0 /// ENSOCUT00000026641 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:2314378:2400156:1 gene:ENSOCUG00000026842 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 88 // 15 // 15 // 0 /// GENSCAN00000028726 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:2336061:2396390:1 transcript_biotype:protein_coding // chr1 // 100 // 88 // 15 // 15 // 0" |
XM_008254821 // G1U0W0 /// XM_008254885 // G1U0W0 /// XM_008254938 // G1U0W0 /// XM_008254984 // G1U0W0 /// XM_008255042 // G1U0W0 /// ENSOCUT00000026641 // G1U0W0 |
--- |
XM_008254821 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// XM_008254821 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_008254821 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254821 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254821 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// XM_008254821 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// XM_008254821 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// XM_008254821 // GO:0032060 // bleb assembly // inferred from electronic annotation /// XM_008254821 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// XM_008254821 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// XM_008254821 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// XM_008254821 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// XM_008254821 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// XM_008254821 // GO:0060326 // cell chemotaxis // inferred from electronic annotation /// XM_008254885 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// XM_008254885 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_008254885 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254885 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254885 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// XM_008254885 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// XM_008254885 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// XM_008254885 // GO:0032060 // bleb assembly // inferred from electronic annotation /// XM_008254885 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// XM_008254885 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// XM_008254885 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// XM_008254885 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// XM_008254885 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// XM_008254885 // GO:0060326 // cell chemotaxis // inferred from electronic annotation /// XM_008254938 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// XM_008254938 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_008254938 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254938 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254938 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// XM_008254938 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// XM_008254938 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// XM_008254938 // GO:0032060 // bleb assembly // inferred from electronic annotation /// XM_008254938 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// XM_008254938 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// XM_008254938 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// XM_008254938 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// XM_008254938 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// XM_008254938 // GO:0060326 // cell chemotaxis // inferred from electronic annotation /// XM_008254984 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// XM_008254984 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_008254984 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254984 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008254984 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// XM_008254984 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// XM_008254984 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// XM_008254984 // GO:0032060 // bleb assembly // inferred from electronic annotation /// XM_008254984 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// XM_008254984 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// XM_008254984 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// XM_008254984 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// XM_008254984 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// XM_008254984 // GO:0060326 // cell chemotaxis // inferred from electronic annotation /// XM_008255042 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// XM_008255042 // GO:0007165 // signal transduction // inferred from electronic annotation /// XM_008255042 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008255042 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// XM_008255042 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// XM_008255042 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// XM_008255042 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// XM_008255042 // GO:0032060 // bleb assembly // inferred from electronic annotation /// XM_008255042 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// XM_008255042 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// XM_008255042 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// XM_008255042 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// XM_008255042 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// XM_008255042 // GO:0060326 // cell chemotaxis // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0000187 // activation of MAPK activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0007202 // activation of phospholipase C activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0032060 // bleb assembly // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0043123 // positive regulation of I-kappaB kinase/NF-kappaB signaling // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0051482 // positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0060326 // cell chemotaxis // inferred from electronic annotation |
XM_008254821 // GO:0005768 // endosome // inferred from electronic annotation /// XM_008254821 // GO:0005829 // cytosol // inferred from electronic annotation /// XM_008254821 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_008254821 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// XM_008254821 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_008254821 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008254821 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008254821 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// XM_008254885 // GO:0005768 // endosome // inferred from electronic annotation /// XM_008254885 // GO:0005829 // cytosol // inferred from electronic annotation /// XM_008254885 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_008254885 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// XM_008254885 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_008254885 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008254885 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008254885 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// XM_008254938 // GO:0005768 // endosome // inferred from electronic annotation /// XM_008254938 // GO:0005829 // cytosol // inferred from electronic annotation /// XM_008254938 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_008254938 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// XM_008254938 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_008254938 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008254938 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008254938 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// XM_008254984 // GO:0005768 // endosome // inferred from electronic annotation /// XM_008254984 // GO:0005829 // cytosol // inferred from electronic annotation /// XM_008254984 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_008254984 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// XM_008254984 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_008254984 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008254984 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008254984 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// XM_008255042 // GO:0005768 // endosome // inferred from electronic annotation /// XM_008255042 // GO:0005829 // cytosol // inferred from electronic annotation /// XM_008255042 // GO:0005886 // plasma membrane // inferred from electronic annotation /// XM_008255042 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// XM_008255042 // GO:0009986 // cell surface // inferred from electronic annotation /// XM_008255042 // GO:0016020 // membrane // inferred from electronic annotation /// XM_008255042 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// XM_008255042 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0005829 // cytosol // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0005887 // integral component of plasma membrane // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0005768 // endosome // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0030139 // endocytic vesicle // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0009986 // cell surface // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0016020 // membrane // inferred from electronic annotation |
XM_008254821 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_008254821 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_008254821 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// XM_008254821 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation /// XM_008254821 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// XM_008254885 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_008254885 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_008254885 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// XM_008254885 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation /// XM_008254885 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// XM_008254938 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_008254938 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_008254938 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// XM_008254938 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation /// XM_008254938 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// XM_008254984 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_008254984 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_008254984 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// XM_008254984 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation /// XM_008254984 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// XM_008255042 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// XM_008255042 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// XM_008255042 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// XM_008255042 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation /// XM_008255042 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0030165 // PDZ domain binding // inferred from electronic annotation /// ENSOCUT00000026641 // GO:0035727 // lysophosphatidic acid binding // inferred from electronic annotation |
"ENSOCUT00000026641 // Pfam // IPR000276 // G protein-coupled receptor, rhodopsin-like" |
1 |
main |
transcript_cluster_id: 19724473 |
19724479 |
chr1 |
+ |
2642082 |
2855192 |
44 |
"XM_002708072 // SVEP1 // sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 // --- // 100357966 /// ENSOCUT00000016260 // SVEP1 // sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 // --- // 100357966" |
"XM_002708072 // RefSeq // PREDICTED: Oryctolagus cuniculus sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 (SVEP1), mRNA. // chr1 // 100 // 100 // 44 // 44 // 0 /// ENSOCUT00000016260 // ENSEMBL // ensembl:known_by_projection chromosome:OryCun2.0:1:2642082:2858206:1 gene:ENSOCUG00000016227 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 44 // 44 // 0 /// GENSCAN00000034152 // ENSEMBL // cdna:genscan chromosome:OryCun2.0:1:2640705:2864094:1 transcript_biotype:protein_coding // chr1 // 100 // 82 // 36 // 36 // 0" |
XM_002708072 // G1TB95 /// ENSOCUT00000016260 // G1TB95 |
XM_002708072 // Ocu.8045 // eye /// ENSOCUT00000016260 // Ocu.8045 // eye |
--- |
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XM_002708072 // GO:0003682 // chromatin binding // inferred from electronic annotation /// XM_002708072 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// ENSOCUT00000016260 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSOCUT00000016260 // GO:0005509 // calcium ion binding // inferred from electronic annotation /// ENSOCUT00000016260 // GO:0003682 // chromatin binding // inferred from electronic annotation |
"ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000436 // Sushi/SCR/CCP domain /// ENSOCUT00000016260 // Pfam // IPR000742 // EGF-like domain /// ENSOCUT00000016260 // Pfam // IPR000742 // EGF-like domain /// ENSOCUT00000016260 // Pfam // IPR000742 // EGF-like domain /// ENSOCUT00000016260 // Pfam // IPR000742 // EGF-like domain /// ENSOCUT00000016260 // Pfam // IPR000742 // EGF-like domain /// ENSOCUT00000016260 // Pfam // IPR001759 // Pentaxin-related /// ENSOCUT00000016260 // Pfam // IPR001881 // EGF-like calcium-binding domain /// ENSOCUT00000016260 // Pfam // IPR001881 // EGF-like calcium-binding domain /// ENSOCUT00000016260 // Pfam // IPR002035 // von Willebrand factor, type A /// ENSOCUT00000016260 // Pfam // IPR003410 // HYR domain /// ENSOCUT00000016260 // Pfam // IPR003410 // HYR domain /// ENSOCUT00000016260 // Pfam // IPR011641 // Tyrosine-protein kinase ephrin type A/B receptor-like /// ENSOCUT00000016260 // Pfam // IPR011641 // Tyrosine-protein kinase ephrin type A/B receptor-like /// ENSOCUT00000016260 // Pfam // IPR011641 // Tyrosine-protein kinase ephrin type A/B receptor-like /// ENSOCUT00000016260 // Pfam // IPR011641 // Tyrosine-protein kinase ephrin type A/B receptor-like /// ENSOCUT00000016260 // Pfam // IPR013111 // EGF-like domain, extracellular /// ENSOCUT00000016260 // Pfam // IPR013111 // EGF-like domain, extracellular /// ENSOCUT00000016260 // Pfam // IPR013111 // EGF-like domain, extracellular /// ENSOCUT00000016260 // Pfam // IPR013111 // EGF-like domain, extracellular /// ENSOCUT00000016260 // Pfam // IPR013111 // EGF-like domain, extracellular" |
1 |
main |
transcript_cluster_id: 19724479 |
19724529 |
chr1 |
+ |
2851603 |
2851697 |
13 |
--- |
ENSOCUT00000032535 // ENSEMBL // ncrna:novel chromosome:OryCun2.0:1:2851603:2851697:1 gene:ENSOCUG00000028540 gene_biotype:snRNA transcript_biotype:snRNA // chr1 // 100 // 100 // 13 // 13 // 0 |
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--- |
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1 |
main |
transcript_cluster_id: 19724529 |