GEO help: Mouse over screen elements for information.
Status
Public on May 28, 2020
Title
nCounter® PanCancer Mouse Pathways Panel
Technology type
other
Distribution
commercial
Organism
Mus musculus Manufacturer
NanoString
Manufacture protocol
See manufacturer's website (http://www.nanostring.com ): https://www.nanostring.com/products/gene-expression-panels/gene-expression-panels-overview/hallmarks-cancer-gene-expression-panel-collection/pancancer-pathways-panel
Submission date
May 27, 2020
Last update date
May 28, 2020
Contact name
Won Fen Wong
E-mail(s)
wonfen@um.edu.my Phone
+60379676672
Organization name
University of Malaya
Department
Department of Medical Microbiology, Faculty of Medicine
Lab
2
Street address
Lembah Pantai
City
Kuala Lumpur
ZIP/Postal code
50603
Country
Malaysia
Samples (52)
GSM4570098 , GSM4570099 , GSM4570100 , GSM4570101 , GSM4570102 , GSM4570103
GSM4570104 ,
GSM4570105 ,
GSM4570106 ,
GSM4570107 ,
GSM4570108 ,
GSM4570109 ,
GSM5277850 ,
GSM5277851 ,
GSM5277852 ,
GSM5277853 ,
GSM5277854 ,
GSM5277855 ,
GSM5277856 ,
GSM5277857 ,
GSM5277858 ,
GSM5277859 ,
GSM5277860 ,
GSM5277861 ,
GSM5380731 ,
GSM5380732 ,
GSM5380733 ,
GSM5380734 ,
GSM6661474 ,
GSM6661475 ,
GSM6661476 ,
GSM6661477 ,
GSM6661478 ,
GSM6661479 ,
GSM6661480 ,
GSM6661481 ,
GSM6661482 ,
GSM6661483 ,
GSM6661484 ,
GSM6661485 ,
GSM6709864 ,
GSM6709865 ,
GSM6709866 ,
GSM6709867 ,
GSM6709868 ,
GSM6709869 ,
GSM6709870 ,
GSM6709871 ,
GSM6709872 ,
GSM6709873 ,
GSM6709874 ,
GSM6709875 Series (6)
GSE151269 Gene expression of RAW264.7 with or without Pdpn expression before and after H. pylori infection
GSE173758 Investigation of gene expression in murine Shh-Medulloblastoma, ocular lesions of Rax-creERT2::Ctnnb1(ex3)Fl/+SmoM2 Fl/+ (RBS) mice and healthy murine eyes.
GSE178134 Gene analysis of tumor cells from mice with the Treg-specific deletion of Blimp1 compared to WT mice (NanoString Cancer)
Data table header descriptions ID GB_ACC GenBank accession number of spotted sequence
Alias Other symbol describing the same gene name
SEQUENCE Targeted nucleotide sequence
Official Full Name Designated gene name
Code_Class A categorization of reporter probe pairs
SPOT_ID
Data table ID GB_ACC Alias SEQUENCE Official Full Name Code_Class SPOT_ID Abl1
NM_009594.4 c-Abl, E430008G22Rik
ATTGCTCTGGGAGATTGCTACCTATGGCATGTCACCTTACCCGGGAATTGACCTGTCTCAGGTTTATGAGCTGCTGGAAAAAGACTACCGCATGGAGCGC
c-abl oncogene 1, non-receptor tyrosine kinase
Endogenous
Acvr1b
NM_007395.3 Acvrlk4, SKR2, ActR-IB, ActRIB, Alk4
TATCAACTGCCGTATTACGACTTAGTGCCCTCCGACCCTTCCATTGAGGAGATGCGAAAGGTTGTATGTGACCAGAAGCTACGGCCCAATGTCCCCAACT
activin A receptor, type 1B
Endogenous
Acvr1c
NM_001033369.3 Alk-7, ALK7
ATCAAATCGTGTGTGTCCCTCCCGGAACTAAATGCTCAGGTCTTCTGTCACAGTTCCAACAACGTGACCAAAACCGAATGTTGCTTCACAGACTTCTGCA
activin A receptor, type IC
Endogenous
Acvr2a
NM_007396.4 tActRII, ActRIIa, Acvr2
TGCCTTTCTGATACCCACCAGAACTGCTGCTCTTACTCTACCTTGCCCAAATCTCCCATGTGAGAAATGCTTTATGATCAACTGCCATAGGACTGACTGA
activin receptor IIA
Endogenous
Akt1
NM_001165894.1 PKB/Akt, PKB, Akt, PKBalpha
GCCATGAAGATCCTCAAGAAGGAGGTCATCGTCGCCAAGGATGAGGTTGCCCACACGCTTACTGAGAACCGTGTCCTGCAGAACTCTAGGCATCCCTTCC
thymoma viral proto-oncogene 1
Endogenous
Akt2
NM_001110208.1 PKBbeta, 2410016A19Rik, PKB
CCGCTCGGCCCCTTTGGATGGCTCCGTTCTCTGCCTGGGGCAGAGGGAAGCCAACCTTGGCTGTTACACATCTCACACCAAGACAGTATTGGGCCCCTTG
thymoma viral proto-oncogene 2
Endogenous
Akt3
NM_011785.3 PKB gamma, D930002M15Rik, Nmf350
AGAACCTGATTTTGTACACTGTCCACTCTCAGTATCTCACACTCTCTGATAGGGACACACATTACTTCCTTCGTACAGACAGCTTAAATAAAGCCCTATG
thymoma viral proto-oncogene 3
Endogenous
Alk
NM_007439.2 CD246, Tcrz
GCCACCTTCCCTGCACCAATGAAAAATTCTCCTTGTGAGCTCCGCATGTCCTGGCTCATCCGCGGGGTTTTGAGAGGAAACGTATCTCTGGTGCTGGTGG
anaplastic lymphoma kinase
Endogenous
Alkbh2
NM_175016.2 Abh2, mABH2
CACGTTTTCTGGTCTTACCCTGACACCAAAGCCCTGGGTTCCTGTTCTAGAGCGTGTTCGAGATCGAGTCTGCGAGGTGACAGGACAGACCTTCAACTTT
alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
Endogenous
Alkbh3
NM_026944.1 Abh3, 1810020C19Rik, mABH3, 1700108H04Rik
AAATCAGCCTGTCACCTACTGGTGTGTCTAGGGTGTGCTTATATCCTGGCTTTGTGGACTTGAAGGAAGCTGACTGGATCTTGGAGCAGCTTTGTAAGGA
alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase
Endogenous
Amer1
NM_175179.4 Amer1, 2810002O09Rik, Wtx, Fam123b
CCCAGTTAGTTATGTTTAGAGTGGGTCAAGTAGCATGTGTCTCGCTCCCTGTTGCTGTGGACTTTGGTATCACAACTAGATGATGTCCTTTTAACCTGGC
APC membrane recruitment 1
Endogenous
Amh
NM_007445.2 Mullerian inhibiting substance, MIS
TAGGGGAGACTGGAGAACAGCAGTTGCTAGTCCTACATCTGGCTGAAGTGATATGGGAGCCCGAGCTCTTGCTGAAGTTCCAAGAGCCTCCACCTGGGGG
anti-Mullerian hormone
Endogenous
Angpt1
NM_009640.3 1110046O21Rik, Ang-1, Angiopoietin-1, ang1
GGGCTGGAAGGAGTATAAAATGGGTTTTGGGAATCCCTCTGGTGAATATTGGCTTGGGAACGAGTTCATTTTTGCAATAACCAGTCAGAGGCAGTACATG
angiopoietin 1
Endogenous
Angpt2
NM_007426.3 Ang2, Ang-2
GAAGAATGTTCCGTGGGAGTTCAGCAGTAAATAACTGGAAAACAGAACACTTAGATGGTGCAGATAAATCTTGGGACCACATTCCTCTAAGCACGGTTTC
angiopoietin 2
Endogenous
Apc
NM_007462.3 Min, CC1
CCATGGGGTCATTCCCAAGAAGAACATTTGTAAATGGAAGCAGAGAGAGTACTGGGTATCTAGAAGAGCTTGAAAAAGAAAGATCATTACTCCTTGCTGA
adenomatosis polyposis coli
Endogenous
Aph1b
NM_177583.4 2310057K14Rik
GTGCAGCAGTAGTGACATTTTCAGAACATCTTGATGAAATGTGCTCCAGGGAAGTGAGGACAGTGTCTTCAGACTGCTCAGAAGATAGCTTTTGTTCCCA
aph1 homolog B, gamma secretase subunit
Endogenous
Ar
NM_013476.3 CATGGGTTGGCGGTCCTTCACTAATGTCAACTCCAGGATGCTCTACTTTGCACCTGACTTGGTTTTCAATGAGTACCGCATGCACAAGTCTCGGATGTAC
androgen receptor
Endogenous
Arid1a
NM_001080819.1 1110030E03Rik, Smarcf1, Osa1, BAF250a
TGTTGTACATTGCACATACCCTTGAATCTCCACAGTTTGGTCCCCTTCCCAGCTACCCCTTTATAGTATGGCGAGTTAACAAGTTGGTGACCTGCACAAA
AT rich interactive domain 1A (SWI-like)
Endogenous
Arid1b
NM_001085355.1 B230217J03Rik, 9330189K18Rik
CCACAATGGTGAACAGCTCCACAGCATCTATGGGTCTTGCAGATATGATGTCTCCCAGTGAGTCCAAATTGTCTGTGCCTCTTAAAGCAGATGGTAAAGA
AT rich interactive domain 1B (SWI-like)
Endogenous
Arid2
NM_175251.2 1700124K17Rik, zipzap/p200, 4432409D24Rik
ACAGGCCACCTCACACTTTGTTCCTGTTTATCTTACGATACAGTAAGGGAAGGCACCATTTAGAGCCAGCTTGTGTTAGTTAACCACTCTCATACTGCCC
AT rich interactive domain 2 (ARID, RFX-like)
Endogenous
784 143 Kbytes .Supplementary data files not provided
Less...
More...