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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 11, 2024 |
| Title |
Infinium Methylation Screening Array (MSA) |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Illumina Inc |
| Manufacture protocol |
https://www.illumina.com/products/by-type/microarray-kits/infinium-methylation-screening-array.html
https://support.illumina.com/array/array_kits/infinium-methylation-screening-array.html
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| Submission date |
Apr 18, 2024 |
| Last update date |
May 12, 2024 |
| Contact name |
Wanding Zhou |
| Organization name |
Children's Hospital of Philadelphia
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| Department |
Pathology and Lab Medicine
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| Street address |
3501 Civic Center Blvd
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| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
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| Samples (420)
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GSM8217992, GSM8217993, GSM8217994, GSM8217995, GSM8217996, GSM8217997
GSM8217998, GSM8217999, GSM8218000, GSM8218001, GSM8218002, GSM8218003, GSM8218004, GSM8218005, GSM8218006, GSM8218007, GSM8218008, GSM8218009, GSM8218010, GSM8218011, GSM8218012, GSM8218013, GSM8218014, GSM8218015, GSM8218016, GSM8218017, GSM8218018, GSM8218019, GSM8218020, GSM8218021, GSM8218022, GSM8218023, GSM8218024, GSM8218025, GSM8218026, GSM8218027, GSM8218028, GSM8218029, GSM8218030, GSM8218031, GSM8218032, GSM8218033, GSM8218034, GSM8218035, GSM8218036, GSM8218037, GSM8218038, GSM8218039, GSM8218040, GSM8218041, GSM8218042, GSM8218043, GSM8218044, GSM8218045, GSM8218046, GSM8218047, GSM8218048, GSM8218049, GSM8218050, GSM8218051, GSM8218052, GSM8218053, GSM8218054, GSM8218055, GSM8218056, GSM8218057, GSM8218058, GSM8218059, GSM8218060, GSM8218061, GSM8218062, GSM8218063, GSM8218064, GSM8218065, GSM8218066, GSM8218067, GSM8218068, GSM8218069, GSM8218070, GSM8218071, GSM8218072, GSM8218073, GSM8218074, GSM8218075, GSM8218076, GSM8218077, GSM8218078, GSM8218079, GSM8218080, GSM8218081, GSM8218082, GSM8218083, GSM8218084, GSM8218085, GSM8218086, GSM8265316, GSM8265317, GSM8265318, GSM8265319, GSM8265320, GSM8265321, GSM8265322, GSM8265323, GSM8265324, GSM8265325, GSM8265326, GSM8265327, GSM8265328, GSM8265329, GSM8265330, GSM8265331, GSM8265332, GSM8265333, GSM8265334, GSM8265335, GSM8265336, GSM8265337, GSM8265338, GSM8265339, GSM8265340, GSM8265341, GSM8265342, GSM8265343, GSM8265344, GSM8265345, GSM8265346, GSM8265347, GSM8265348, GSM8265349, GSM8265350, GSM8265351, GSM8265352, GSM8265353, GSM8265354, GSM8265355, GSM8265356, GSM8265357, GSM8265358, GSM8265359, GSM8265360, GSM8265361, GSM8265362, GSM8265363, GSM8265364, GSM8265365, GSM8265366, GSM8265367, GSM8265368, GSM8265369, GSM8265370, GSM8265371, GSM8265372, GSM8265373, GSM8265374, GSM8265375, GSM8265376, GSM8265377, GSM8265378, GSM8265379, GSM8265380, GSM8265381, GSM8265382, GSM8265383, GSM8265384, GSM8265385, GSM8265386, GSM8265387, GSM8265388, GSM8265389, GSM8265390, GSM8265391, GSM8265392, GSM8265393, GSM8265394, GSM8265395, GSM8265396, GSM8265397, GSM8265398, GSM8265399, GSM8265400, GSM8265401, GSM8265402, GSM8265403, GSM8265404, GSM8265405, GSM8265406, GSM8265407, GSM8265408, GSM8265409, GSM8265410, GSM8265411, GSM8265412, GSM8265413, GSM8265414, GSM8265415, GSM8265416, GSM8265417, GSM8265418, GSM8265419, GSM8265420, GSM8265421, GSM8265422, GSM8265423, GSM8265424, GSM8265425, GSM8265426, GSM8265427, GSM8265428, GSM8265429, GSM8265430, GSM8265431, GSM8265432, GSM8265433, GSM8265434, GSM8265435, GSM8265436, GSM8265437, GSM8265438, GSM8265439, GSM8265440, GSM8265441, GSM8265442, GSM8265443, GSM8265444, GSM8265445, GSM8265446, GSM8265447, GSM8265448, GSM8265449, GSM8265450, GSM8265451, GSM8265452, GSM8265453, GSM8265454, GSM8265455, GSM8265456, GSM8265457, GSM8265458, GSM8265459, GSM8265460, GSM8265461, GSM8265462, GSM8265463, GSM8265464, GSM8265465, GSM8265466, GSM8265467, GSM8265468, GSM8265469, GSM8265470, GSM8265471, GSM8265472, GSM8265473, GSM8265474, GSM8265475, GSM8265476, GSM8265477, GSM8265478, GSM8265479, GSM8265480, GSM8265481, GSM8265482, GSM8265483, GSM8265484, GSM8265485, GSM8265486, GSM8265487, GSM8265488, GSM8265489, GSM8265490, GSM8265491, GSM8265492, GSM8265493, GSM8265494, GSM8265495, GSM8265496, GSM8265497, GSM8265498, GSM8265499, GSM8265500, GSM8265501, GSM8265502, GSM8265503, GSM8265504, GSM8265505, GSM8265506, GSM8265507, GSM8265508, GSM8265509, GSM8265510, GSM8265511, GSM8265512, GSM8265513, GSM8265514, GSM8265515, GSM8265516, GSM8265517, GSM8265518, GSM8265519, GSM8265520, GSM8265521, GSM8265522, GSM8265523, GSM8265524, GSM8265525, GSM8265526, GSM8265527, GSM8265528, GSM8265529, GSM8265530, GSM8265531, GSM8265532, GSM8265533, GSM8265534, GSM8265535, GSM8265536, GSM8265537, GSM8265538, GSM8265539, GSM8265540, GSM8265541, GSM8265542, GSM8265543, GSM8265544, GSM8265545, GSM8265546, GSM8265547, GSM8265548, GSM8265549, GSM8265550, GSM8265551, GSM8265552, GSM8265553, GSM8265554, GSM8265555, GSM8265556, GSM8265557, GSM8265558, GSM8265559, GSM8265560, GSM8265561, GSM8265562, GSM8265563, GSM8265564, GSM8265565, GSM8265566, GSM8265567, GSM8265568, GSM8265569, GSM8265570, GSM8265571, GSM8265572, GSM8265573, GSM8265574, GSM8265575, GSM8265576, GSM8265577, GSM8265578, GSM8265579, GSM8265580, GSM8265581, GSM8265582, GSM8265583, GSM8265584, GSM8265585, GSM8265586, GSM8265587, GSM8265588, GSM8265589, GSM8265590, GSM8265591, GSM8265592, GSM8265593, GSM8265594, GSM8265595, GSM8265596, GSM8265597, GSM8265598, GSM8265599, GSM8265600, GSM8265601, GSM8265602, GSM8265603, GSM8265604, GSM8265605, GSM8265606, GSM8265607, GSM8265608, GSM8265609, GSM8265610, GSM8265611, GSM8265612, GSM8265613, GSM8265614, GSM8265615, GSM8265616, GSM8265617, GSM8265618, GSM8265619, GSM8265620, GSM8265621, GSM8265622, GSM8265623, GSM8265624, GSM8265625, GSM8265626, GSM8265627, GSM8265628, GSM8265629, GSM8265630, GSM8265631, GSM8265632, GSM8265633, GSM8265634, GSM8265635, GSM8265636, GSM8265637, GSM8265638, GSM8265639, GSM8265640
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| Series (1) |
| GSE264438 |
MSA: Scalable DNA methylation BeadChip for human trait screening |
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| Data table header descriptions |
| ID |
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| AddressA_ID |
Probe A tango address |
| AlleleA_ProbeSeq |
Probe A sequence |
| AddressB_ID |
Probe B tango address |
| AlleleB_ProbeSeq |
Probe B sequence |
| SPOT_ID |
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| Data table |
| ID |
AddressA_ID |
AlleleA_ProbeSeq |
AddressB_ID |
AlleleB_ProbeSeq |
SPOT_ID |
| cg06185909_TC11 |
17758296 |
ACATCAATATATACTATAAAACTCAAAAATACCCCTTAAATCTACTAACA |
63768381 |
ACATCGATATATACTATAAAACTCAAAAATACCCCTTAAATCTACTAACG |
cg06185909_TC11 |
| cg18975462_BC11 |
73602929 |
TTATTTACAATCCTCTTAACCCAAACAAAACACATACAAACCAAAAAACA |
60738418 |
TTATTTACAATCCTCTTAACCCAAACAAAACACATACAAACCAAAAAACG |
cg18975462_BC11 |
| cg20516119_TC11 |
87695416 |
AATTTTACCTAAAATATTTCAACAAACACCCTCAACTAATATATTTACCA |
86736429 |
AATTTTACCTAAAATATTTCAACAAACACCCTCAACTAATATATTTACCG |
cg20516119_TC11 |
| cg10149399_BC11 |
52716333 |
ACAATACATAATCTATATAAACCATAAAAAACCTAAAATACTCCCTCACA |
85750887 |
ACAATACATAATCTATATAAACCATAAAAAACCTAAAATACTCCCTCACG |
cg10149399_BC11 |
| cg24004665_BC11 |
70689419 |
CCTCATCACAATCTCTATCTTCATAAATACATATATAATAATACTATTCA |
62793521 |
CCTCATCACAATCTCTATCTTCATAAATACATATATAATAATACTATTCG |
cg24004665_BC11 |
| cg12923664_BC11 |
21773496 |
AAAAACTAACACAAACCAAAAACTAAACCTCTTTTATCAATTAACCAACA |
21656889 |
AAAAACTAACACAAACCAAAAACTAAACCTCTTTTATCGATTAACCAACG |
cg12923664_BC11 |
| cg13242781_TC11 |
77699867 |
TACCTATAAATACAACTTATCTCCCACAAAAACTATAATTACCTAAAACA |
22779872 |
TACCTATAAATACAACTTATCTCCCACGAAAACTATAATTACCTAAAACG |
cg13242781_TC11 |
| cg21628163_BC11 |
77605443 |
TTAACATTTTATTAAAAACACCACCTTCCTTTACATATTTACAACTTCCA |
69797126 |
TTAACATTTTATTAAAAACACCACCTTCCTTTACATATTTACAACTTCCG |
cg21628163_BC11 |
| cg00144638_BC11 |
27791231 |
ACTCTCAAAATACAAAAACCTTCCAAATAATAAATCCTAAACTAACTTCA |
59782827 |
ACTCTCAAAATACAAAAACCTTCCAAATAATAAATCCTAAACTAACTTCG |
cg00144638_BC11 |
| cg00483256_TC11 |
94688362 |
TAACTTATACTACTTATAAAACCTAAATCATATACTAAAATCCTACCCCA |
60703453 |
TAACTTATACTACTTATAAAACCTAAATCATATACTAAAATCCTACCCCG |
cg00483256_TC11 |
| cg00590230_BC11 |
43702914 |
TTATTCTTCAAAACTTAATTCAAAACCTTCCTAAACTACTACCCTAATCA |
67665142 |
TTATTCTTCAAAACTTAATTCAAAACCTTCCTAAACTACTACCCTAATCG |
cg00590230_BC11 |
| cg00614426_BC11 |
82656479 |
TAAAAACAAAAACTTACAAATCCTAAACCAATACTCTTAACTACTCAACA |
27780907 |
TAAAAACAAAAACTTACAAATCCTAAACCAATACTCTTAACTACTCAACG |
cg00614426_BC11 |
| cg00676694_BC11 |
91635899 |
AACTTAATCCCCTATAACCACCTTAATACAATAATCATAACAATATAACA |
1606880 |
AACTTAATCCCCTATAACCGCCTTAATACAATAATCATAACAATATAACG |
cg00676694_BC11 |
| cg00791311_BC11 |
75803279 |
ACCATAAACCAAACTCTCAAAAAACAATAATAATACTTATCAATCACTCA |
12682254 |
ACCATAAACCAAACTCTCAAAAAACAATAATAATACTTATCAATCACTCG |
cg00791311_BC11 |
| cg01804429_BC11 |
81772190 |
CACCTAAAACTCTTAATACAAAACCTAACAAACCTTCTTAACTAAAATCA |
63689593 |
CACCTAAAACTCTTAATACAAAACCTAACAAACCTTCTTAACTAAAATCG |
cg01804429_BC11 |
| cg02259181_BC11 |
69765490 |
ATAAAATTCCCTAAAACACATAAAAAACAAACCACAAACAATAAACCTCA |
61608103 |
ATAAAATTCCCTAAAACACATAAAAAACAAACCACAAACAATAAACCTCG |
cg02259181_BC11 |
| cg06744254_BC11 |
11614850 |
CTAACTCCAAAATCCCACAATAACTTATATTAATCCTAAATCAAACTTCA |
79618446 |
CTAACTCCAAAATCCCACAATAACTTATATTAATCCTAAATCAAACTTCG |
cg06744254_BC11 |
| cg06904431_BC11 |
84642377 |
TAACTTAAAACACTAACAAAAACCAACATAACTTAAATACCTTAACACCA |
13671355 |
TAACTTAAAACACTAACAAAAACCAACATAACTTAAATACCTTAACACCG |
cg06904431_BC11 |
| cg13093971_BC11 |
98656488 |
CACTCATCTTACACTTTCATAAAAATATAACATAAATCACTCTTCTTACA |
11775131 |
CACTCGTCTTACACTTTCATAAAAATATAACATAAATCACTCTTCTTACG |
cg13093971_BC11 |
| cg13149485_BC11 |
78736883 |
AAAAAATACCTCTACATACAAAACAACTATAAAACTACCAACTTACTTCA |
50700962 |
AAAAAATACCTCTACATACAAAACAACTATAAAACTACCAACTTACTTCG |
cg13149485_BC11 |
Total number of rows: 284317
Table truncated, full table size 30353 Kbytes.
| Supplementary data files not provided |
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