GEO Accession viewer

Data table
ID	SEQUENCE	orf 19 number	Contig number	Gene name	primary_CGDID/Entrez_GeneID	description	feature_type	yeast_ortholog	ORF	SPOT_ID
CA00330_01	GATACGTCCTAGAATATTATCCAAACGTCAAAAACGAAGAAGAAGATTTCAGGCAAACTTGTACTTGCTC	orf19.3269, orf19.3270	Contig4-2793_0012\|IPF23990.1\|IPF279.1\|orf19.10779\|orf6.8269\|orf6.8270	GSL2	CAL0003370	Protein similar to beta-1,3-glucan synthase; 16 predicted membrane-spanning regions; very low gene expression in yeast-form and hyphal cells	ORF		CaO19.3269
CA10134_01	AGATGAATGGATTCACATTAACTGGACTGGTAGAGGTGGTGATGTTTCTTCAACTACTTACGATGCTTAG	orf19.5024	Contig4-3075_0013\|IPF22257.1\|IPF3028.2\|orf19.12491\|orf6.7985	-	CAL0001618	Predicted ORF from Assembly 19	ORF	GND1	CaO19.5024
CA10133_01	AAGGTGAATGGTTTTACGTTCAAGTTCATTTCATCAGTGATCAAGGTATTAAGACTTTGACCAACGAAGA	orf19.6229	CCT\|CCT1\|CTA1\|Contig4-1984_0001\|Contig4-2906_0020\|IPF20124.1\|IPF20907.1\|orf19.13609\|orf6.5127	CAT1	CAL0000462	Catalase; role in resistance to oxidative stress, including neutrophils, peroxide; role in systemic virulence in mouse; regulated by iron, ciclopirox olamine, fluconazole, growth, oxidative stress, carbon source, pH, Rim101p, Ssn6p	ORF	CTA1	CaO19.6229
CA10114_01	TCCAACACCTACAACTACTACAACTACTACAACAACAACAGACCATACTACTGTATTGGATGATATATCA	orf19.3256	Contig4-2987_0018\|Contig4-2987_0019\|IPF24067.1\|IPF250.2\|orf19.10766\|orf6.8256	SLN1	CAL0003344	Histidine kinase involved in a two-component signaling pathway that regulates cell wall biosynthesis	ORF	SLN1	CaO19.3256
CA10073_01	CGGAACACAAATTTAACTAGTAAGCCAACGTTTTTTGGATGTGATGCCCAGAACTTGACATCATTAACTG	-	-	-	-	-	-	-		no annotation provided
CA10140_01	AAGAAAGTGAAGACCACCAAACAGCTTGGTATAGACCAAAGTATACTGTTGACGAAGTTACTCGTATCAC	-	-	-	-	-	-	-		no annotation provided
CA10285_01	ATTTAGCCAAATCATTGAGTGTGGAATGGGCTAGTTTTGGTGCTAGAGTAAATTCAATTTCTCCAGGGTA	orf19.2896	Contig4-2677_0008\|IPF11150.2\|IPF24438.1\|orf19.10414\|orf6.6126	SOU1	CAL0005253	Enzyme involved in utilization of L-sorbose; has sorbitol dehydrogenase, fructose reductase, and sorbose reductase activities; has NAD-binding site motif; transcriptional regulation affected by chromosome 5 copy number	ORF		CaO19.2896
CA10044_01	TCAATATTGCTTTGAATAAGAATTCCATTCCTGGAGATAAATCCGCTTTAGTTCCAGGTGGGGTTAGAAT	orf19.5750	Contig4-2858_0010\|IPF15120.2\|IPF21460.1\|SHMII\|orf19.13173\|orf6.2091	SHM2	CAL0001464	Cytoplasmic serine hydroxymethyltransferase; complements the glycine auxotrophy of an S. cerevisiae shm1 null shm2 null gly1-1 triple mutant; farnesol-upregulated in biofilm	ORF	SHM2	CaO19.5750
CA10124_01	CAACTTGTTGACTAAGATTGCCACTATCGGTATTTCTATCGTTGTTGGTTTCGGTTTAATTACCATGTAA	orf19.6081	Contig4-2998_0022\|IPF14612.3\|IPF4604.2\|orf19.13500\|orf6.1067\|orf6.6260	PHR2	CAL0005209	Glycosidase; role in cell wall structure; may act on beta-1,3-glucan prior to beta-1,6-glucan linkage; role in vaginal but not systemic virulence (low pH, not neutral); low pH, high iron, fluconazole induced; Rim101p-downregulated at pH 8	ORF	GAS1	CaO19.6081
CA10106_01	CGACAAAAAGAGGTGTCTAGAAGAGGGAATGTTTGATTTTATAACCAAACCCATTTTACCAGATGAACTT	orf19.896	Contig4-3099_0013\|Contig4-3099_0015\|HK1\|IPF26451.1\|IPF3668.2\|orf19.8515\|orf6.7281\|orf6.7978	CHK1	CAL0002932	Histidine kinase involved in a two-component signaling pathway that regulates cell wall biosynthesis; disruption impairs hyphal development and decreases virulence in mouse intravenous (but not rat vaginal) infection	ORF		CaO19.896
CA10056_01	TGGTGCCAGTGGTGCTGGTGGTATAGATGTTTCTCAGAATAATTCTGGAGCAAAGAATAACTGTTGCTAG	orf19.2571	Contig4-3016_0005\|IPF24779.1\|IPF2730.1\|orf19.10103\|orf6.4672	SEC4	CAL0002519	Small GTPase of Rab family; possible C-terminal palmitoylation; downregulated on adherence to polystyrene; not regulated on white-opaque or yeast-hyphal switching; functional homolog of S. cerevisiae Sec4p, which acts in secretion	ORF	SEC4	CaO19.2571
CA10090_01	CACTACACAATTACGTTACACCTACCAGAACTTGCCTCTTAAATTGAAAGCAGATGGAATTATTGCAAAG	-	-	-	-	-	-	-		no annotation provided
CA10089_01	AAACCGTCCATTCACTTACTGGTCTAATACATCAACTTTCAAATTAACATACGACGATAACGAAAGGCAA	-	-	-	-	-	-	-		no annotation provided
CA00144_01	ATTGTTGTTCATGCTGGTACTGATGATTATGGTAAAGGTGGTTTTGAAGATTCTAAAACTACTGGTCATG	orf19.2770.1	IPF24645.1\|IPF7082.2\|orf19.10286.2	SOD1	CAL0006717	Cytosolic copper- and zinc-containing superoxide dismutase, involved in protection from oxidative stress and required for full virulence; alkaline upregulated by Rim101p; upregulated in the presence of human blood	ORF	SOD1	CaO19.2770
CA10283_01	GACTAAGTGTCTAAGTCGTGCTAAATTCAAAGCATTCGTTGAGGGTATGATAAAACGGTTAGACCTAGAA	orf19.2372, orf19.5373, orf19.6451	Contig4-2898_0014\|IPF24953.1\|IPF29132.1\|orf19.9908\|orf6.4027\|orf6.4770\|orf6.6008	-	CAL0000782	Orf19.2371, orf19.2372, and orf19.2375 are similar to the Tca2 (pCal) retrotransposon, which is present in strain hOG1042 as 50 to 100 copies of a linear dsDNA	ORF		CaO19.2372
CA00336_01	ATTTCATTTTGGATACCGAAGCTGGTCCAAAAGCTAAAAAGGGTAGAGAAGACAAAGTCAAACAAAATGT	orf19.3732	Contig4-3070_0024\|ERG251\|IPF23536.1\|IPF9179.2\|orf19.11216\|orf6.1690	ERG25	CAL0001165	Putative C-4 methyl sterol oxidase with role in C4-demethylation of ergosterol biosynthesis intermediates, based on similarity to S. cerevisiae Erg25p; fluconazole-induced; upregulated in biofilm and in azole-resistant strain	ORF	ERG25	CaO19.3732
CA00337_01	AGTGGTGTTTAACCCCTTGTTGAAACCAAGATTATCTAAGGCTGGATTAATGAAGAGTGATACAAGAATT	orf19.5230	Contig4-2357_0008\|IPF11274.2\|IPF21956.1\|orf19.12695\|orf6.2438	MRPS9	CAL0003535	Mitochondrial ribosomal protein S9; has N-terminal mitochondrial targeting signal and an S9 consensus motif; overexpression in S. cerevisiae causes respiratory defect that is reversible upon cessation of C. albicans gene expression	ORF	MRPS9	CaO19.5230
CA10069_01	GAACCAGATCTTCGAGTTTGTTATATGGCATTATTGATTCGTCATTTAATGAAATATGATGACCATAATA	orf19.1803	Contig4-2476_0003\|IPF14866.2\|IPF19031.1\|orf19.9369\|orf6.1162\|orf6.1576	CDC43	CAL0001576	Beta subunit of heterodimeric protein geranylgeranyltransferase type I; GGTase I enzyme binds zinc, is Mg-dependent; Cdc42p is GGTase I substrate	ORF	CDC43	CaO19.1803
CA11126_01	AGACCCACCAAGTGGAGTATCAGCATCTCCATTACCAGATAATGTCATGAAATGGAATGCAGTAATTATA	-	-	-	-	-	-	-		no annotation provided
CA10028_01	ATAAAGAAGAACAAATGGAGACAAACGAAACTAAGGCAAAAGAAGAAGAAATACCACCACCTGAATTAAC	-	-	-	-	-	-	-		no annotation provided