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Platform GPL5105 Query DataSets for GPL5105
Status Public on Apr 20, 2007
Title FilgenArray miRNA384
Technology type spotted oligonucleotide
Distribution commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Manufacturer Filgen, Inc.
Manufacture protocol Nexterion Slide E is designed to covalently immobilize amine-modified DNA for microarrays. They are easy to use and are compatible with most available arraying and scanning instruments. This slide has a very low variation in thickness and an ultra-flat surface, and an extremely low inhiherent fluorescence. The epoxy surface coating allows for the efficient covalent and directed binding of molecules. Oligonuclentides react with the epoxy coated glass surface to form a covalent bond.
Technical specifications:
Slide dimensions: 25.0 × 76.5 × 1.0 mm
1 × Printing buffer: 3 x SSC
Catalog number Filgen-miRNA-384
Support glass
Coating aminosilane
Description probe set: mirVana miRNA Probe Set_1564V1
Manufactured using SCHOTT’s Nexterion Slide E Technology
Surface type: non-adsorptive
Attachment: covalent
The Filgen microRNA MicroArrays are a Filgen product that is manufactured by Filgen and incorporates the Nexterion Slide E
Web link
Submission date Apr 19, 2007
Last update date Apr 20, 2007
Contact name Manabu Harada
Organization name Filgen,Inc.
Department Biosciences
Street address 15-1 Nakanoshima, Ohdaka-cho, Midori-ku
City Nagoya
State/province aichi
ZIP/Postal code 459-8001
Country Japan
Samples (4) GSM348311, GSM348312, GSM348313, GSM348314
Series (3)
GSE13858 Global survey of miRNA microarray of uterus, ovariectomized female mice with or without estrogen (E2) treatment
GSE13859 Global survey of miRNA microarray of whole embryo, wild type vs estrogen receptor alpha knockout mice
GSE14031 Global survey of miRNA profiles in the uterus and an estrogen receptor alpha knockout embryo

Data table header descriptions
Probe Name miRBase miRNA Gene Name or the name of the control on the array
Human Mature Sanger Registry Name miRBase human miRNA Gene Name
Human Sanger Accession Number(s) miRBase Accession Number (human)
Mouse Mature Sanger Registry Name miRBase mouse miRNA Gene Name
Mouse Sanger Accession Number(s) miRBase Accession Number (mouse)
Rat Mature Sanger Registry Name miRBase Rat miRNA Gene Name
Rat Sanger Accession Number(s) miRBase Accession Number (Rat)
SEQUENCE Mature miRNA Sequence

Data table
ID Probe Name Human Mature Sanger Registry Name Human Sanger Accession Number(s) Mouse Mature Sanger Registry Name Mouse Sanger Accession Number(s) Rat Mature Sanger Registry Name Rat Sanger Accession Number(s) SEQUENCE SPOT_ID
PS20001 Control_1 Control
PS20101 hsa_let_7a hsa-let-7a MI0000060,MI0000061,MI0000062 rno-let-7a MI0000827,MI0000828 UGAGGUAGUAGGUUGUAUAGUU hsa_let_7a
PS20102 hsa_let_7b hsa-let-7b MI0000063 mmu-let-7b MI0000558 rno-let-7b MI0000829 UGAGGUAGUAGGUUGUGUGGUU hsa_let_7b
PS20103 hsa_let_7c hsa-let-7c MI0000064 mmu-let-7c MI0000559,MI0000560 rno-let-7c MI0000830,MI0000831 UGAGGUAGUAGGUUGUAUGGUU hsa_let_7c
PS20104 hsa_let_7d hsa-let-7d MI0000065 mmu-let-7d MI0000405 rno-let-7d MI0000601 AGAGGUAGUAGGUUGCAUAGU hsa_let_7d
PS20105 hsa_let_7e hsa-let-7e MI0000066 mmu-let-7e MI0000561 rno-let-7e MI0000832 UGAGGUAGGAGGUUGUAUAGU hsa_let_7e
PS20106 hsa_let_7f hsa-let-7f MI0000067,MI0000068 rno-let-7f MI0000833,MI0000834 UGAGGUAGUAGAUUGUAUAGUU hsa_let_7f
PS20107 hsa_let_7g hsa-let-7g MI0000433 mmu-let-7g MI0000137 UGAGGUAGUAGUUUGUACAGU hsa_let_7g
PS20108 hsa_let_7i hsa-let-7i MI0000434 mmu-let-7i MI0000138 rno-let-7i MI0000835 UGAGGUAGUAGUUUGUGCUGU hsa_let_7i
PS20109 hsa_miR_1 hsa-miR-1 MI0000651,MI0000437 mmu-miR-1 MI0000139,MI0000652 UGGAAUGUAAAGAAGUAUGUA hsa_miR_1
PS20110 hsa_miR_100 hsa-miR-100 MI0000102 mmu-miR-100 MI0000692 rno-miR-100 MI0000885 AACCCGUAGAUCCGAACUUGUG hsa_miR_100
PS20111 hsa_miR_101 hsa-miR-101 MI0000103,MI0000739 mmu-miR-101a MI0000148 rno-miR-101 MI0000886 UACAGUACUGUGAUAACUGAAG hsa_miR_101
PS20112 hsa_miR_103 hsa-miR-103 MI0000109,MI0000108 mmu-miR-103 MI0000587,MI0000588 rno-miR-103 MI0000888,MI0000887 AGCAGCAUUGUACAGGGCUAUGA hsa_miR_103
PS20113 hsa_miR_105 hsa-miR-105 MI0000111,MI0000112 UCAAAUGCUCAGACUCCUGU hsa_miR_105
PS20114 hsa_miR_106a hsa-miR-106a MI0000113 AAAAGUGCUUACAGUGCAGGUAGC hsa_miR_106a
PS20115 hsa_miR_106b hsa-miR-106b MI0000734 mmu-miR-106b MI0000407 rno-miR-106b MI0000889 UAAAGUGCUGACAGUGCAGAU hsa_miR_106b
PS20116 hsa_miR_107 hsa-miR-107 MI0000114 mmu-miR-107 MI0000684 rno-miR-107 MI0000890 AGCAGCAUUGUACAGGGCUAUCA hsa_miR_107
PS20117 hsa_miR_10a hsa-miR-10a MI0000266 mmu-miR-10a MI0000685 rno-miR-10a MI0000841 UACCCUGUAGAUCCGAAUUUGUG hsa_miR_10a
PS20118 hsa_miR_10b hsa-miR-10b MI0000267 UACCCUGUAGAACCGAAUUUGU hsa_miR_10b
PS20119 hsa_miR_122a hsa-miR-122a MI0000442 mmu-miR-122a MI0000256 rno-miR-122a MI0000891 UGGAGUGUGACAAUGGUGUUUGU hsa_miR_122a

Total number of rows: 378

Table truncated, full table size 35 Kbytes.

Download family Format
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Supplementary data files not provided

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