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Platform GPL5105

Query DataSets for GPL5105

Status

Public on Apr 20, 2007

Title

FilgenArray miRNA384

Technology type

spotted oligonucleotide

Distribution

commercial

Organisms

Homo sapiens; Mus musculus; Rattus norvegicus

Manufacturer

Filgen, Inc.

Manufacture protocol

Nexterion Slide E is designed to covalently immobilize amine-modified DNA for microarrays. They are easy to use and are compatible with most available arraying and scanning instruments. This slide has a very low variation in thickness and an ultra-flat surface, and an extremely low inhiherent fluorescence. The epoxy surface coating allows for the efficient covalent and directed binding of molecules. Oligonuclentides react with the epoxy coated glass surface to form a covalent bond.
Technical specifications:
Slide dimensions: 25.0 × 76.5 × 1.0 mm
1 × Printing buffer: 3 x SSC

Catalog number

Filgen-miRNA-384

Support

glass

Coating

aminosilane

Description

probe set: mirVana miRNA Probe Set_1564V1
Manufactured using SCHOTT’s Nexterion Slide E Technology
Surface type: non-adsorptive
Attachment: covalent
The Filgen microRNA MicroArrays are a Filgen product that is manufactured by Filgen and incorporates the Nexterion Slide E

Web link

http://www.filgen.jp

Submission date

Apr 19, 2007

Last update date

Apr 20, 2007

Contact name

Manabu Harada

E-mail(s)

harada@filgen.jp

Organization name

Filgen,Inc.

Department

Biosciences

Street address

15-1 Nakanoshima, Ohdaka-cho, Midori-ku

City

Nagoya

State/province

aichi

ZIP/Postal code

459-8001

Country

Japan

Samples (4)

GSM348311, GSM348312, GSM348313, GSM348314

Series (3)

GSE13858	Global survey of miRNA microarray of uterus, ovariectomized female mice with or without estrogen (E2) treatment
GSE13859	Global survey of miRNA microarray of whole embryo, wild type vs estrogen receptor alpha knockout mice
GSE14031	Global survey of miRNA profiles in the uterus and an estrogen receptor alpha knockout embryo

Data table header descriptions
ID
Probe Name	miRBase miRNA Gene Name or the name of the control on the array
Human Mature Sanger Registry Name	miRBase human miRNA Gene Name
Human Sanger Accession Number(s)	miRBase Accession Number （human）
Mouse Mature Sanger Registry Name	miRBase mouse miRNA Gene Name
Mouse Sanger Accession Number(s)	miRBase Accession Number （mouse）
Rat Mature Sanger Registry Name	miRBase Rat miRNA Gene Name
Rat Sanger Accession Number(s)	miRBase Accession Number (Rat)
SEQUENCE	Mature miRNA Sequence
SPOT_ID

Data table
ID	Probe Name	Human Mature Sanger Registry Name	Human Sanger Accession Number(s)	Mouse Mature Sanger Registry Name	Mouse Sanger Accession Number(s)	Rat Mature Sanger Registry Name	Rat Sanger Accession Number(s)	SEQUENCE	SPOT_ID
PS20001	Control_1								Control
PS20101	hsa_let_7a	hsa-let-7a	MI0000060,MI0000061,MI0000062			rno-let-7a	MI0000827,MI0000828	UGAGGUAGUAGGUUGUAUAGUU	hsa_let_7a
PS20102	hsa_let_7b	hsa-let-7b	MI0000063	mmu-let-7b	MI0000558	rno-let-7b	MI0000829	UGAGGUAGUAGGUUGUGUGGUU	hsa_let_7b
PS20103	hsa_let_7c	hsa-let-7c	MI0000064	mmu-let-7c	MI0000559,MI0000560	rno-let-7c	MI0000830,MI0000831	UGAGGUAGUAGGUUGUAUGGUU	hsa_let_7c
PS20104	hsa_let_7d	hsa-let-7d	MI0000065	mmu-let-7d	MI0000405	rno-let-7d	MI0000601	AGAGGUAGUAGGUUGCAUAGU	hsa_let_7d
PS20105	hsa_let_7e	hsa-let-7e	MI0000066	mmu-let-7e	MI0000561	rno-let-7e	MI0000832	UGAGGUAGGAGGUUGUAUAGU	hsa_let_7e
PS20106	hsa_let_7f	hsa-let-7f	MI0000067,MI0000068			rno-let-7f	MI0000833,MI0000834	UGAGGUAGUAGAUUGUAUAGUU	hsa_let_7f
PS20107	hsa_let_7g	hsa-let-7g	MI0000433	mmu-let-7g	MI0000137			UGAGGUAGUAGUUUGUACAGU	hsa_let_7g
PS20108	hsa_let_7i	hsa-let-7i	MI0000434	mmu-let-7i	MI0000138	rno-let-7i	MI0000835	UGAGGUAGUAGUUUGUGCUGU	hsa_let_7i
PS20109	hsa_miR_1	hsa-miR-1	MI0000651,MI0000437	mmu-miR-1	MI0000139,MI0000652			UGGAAUGUAAAGAAGUAUGUA	hsa_miR_1
PS20110	hsa_miR_100	hsa-miR-100	MI0000102	mmu-miR-100	MI0000692	rno-miR-100	MI0000885	AACCCGUAGAUCCGAACUUGUG	hsa_miR_100
PS20111	hsa_miR_101	hsa-miR-101	MI0000103,MI0000739	mmu-miR-101a	MI0000148	rno-miR-101	MI0000886	UACAGUACUGUGAUAACUGAAG	hsa_miR_101
PS20112	hsa_miR_103	hsa-miR-103	MI0000109,MI0000108	mmu-miR-103	MI0000587,MI0000588	rno-miR-103	MI0000888,MI0000887	AGCAGCAUUGUACAGGGCUAUGA	hsa_miR_103
PS20113	hsa_miR_105	hsa-miR-105	MI0000111,MI0000112					UCAAAUGCUCAGACUCCUGU	hsa_miR_105
PS20114	hsa_miR_106a	hsa-miR-106a	MI0000113					AAAAGUGCUUACAGUGCAGGUAGC	hsa_miR_106a
PS20115	hsa_miR_106b	hsa-miR-106b	MI0000734	mmu-miR-106b	MI0000407	rno-miR-106b	MI0000889	UAAAGUGCUGACAGUGCAGAU	hsa_miR_106b
PS20116	hsa_miR_107	hsa-miR-107	MI0000114	mmu-miR-107	MI0000684	rno-miR-107	MI0000890	AGCAGCAUUGUACAGGGCUAUCA	hsa_miR_107
PS20117	hsa_miR_10a	hsa-miR-10a	MI0000266	mmu-miR-10a	MI0000685	rno-miR-10a	MI0000841	UACCCUGUAGAUCCGAAUUUGUG	hsa_miR_10a
PS20118	hsa_miR_10b	hsa-miR-10b	MI0000267					UACCCUGUAGAACCGAAUUUGU	hsa_miR_10b
PS20119	hsa_miR_122a	hsa-miR-122a	MI0000442	mmu-miR-122a	MI0000256	rno-miR-122a	MI0000891	UGGAGUGUGACAAUGGUGUUUGU	hsa_miR_122a

Total number of rows: 378

Table truncated, full table size 35 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary data files not provided

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