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Status
Public on Oct 10, 2007
Title
Genomessage Homo sapiens 0.7k
Technology type
spotted DNA/cDNA
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Japan Genome Solutions, Inc
Manufacture protocol
For most of the genes, each cDNA was designed approximately 500-600 bp and within approximately 1 kb region from the 3’-poly(A) tail and all cDNAs for microarray probe were cloned into the pGEM vector (Promega, Madison, WI). We also selected and cloned external control genes (approximately 0.5-1 kb) into the pGEM vector to establish the dynamic range of the microarray. Renilla luciferase (RL), baculovirus envelope gp64 (GP), and lambda phage DNA (LD). All clones for capture probe on microarray were sequenced and validated by comparison with the GenBank sequence. The aminosilane surfaces of SuperAmine glass slides (TeleChem International, Sunnyvale, CA) were stamped with quadruply spots of cDNA probe corresponding to each of the capture probe genes with a Geneqs 2000 arrayer (KakenGenex, Matsudo, Japan). The average spot size was 150 mm and separated each other with a distance (500 mm).
Submission date
Jul 02, 2007
Last update date
Oct 10, 2007
Contact name
Tsutomu Takeuchi
Organization name
Saitama Medical University
Department
Department of Internal Medicine
Lab
Division of Rheumatology/Clinical Immunology
Street address
1981 Tsujido-machi, Kamoda
City
Kawagoe-shi, Saitama
ZIP/Postal code
350-8550
Country
Japan
Samples (74)
GSM206911 , GSM206912 , GSM206913 , GSM206914 , GSM206915 , GSM206916
GSM206917 ,
GSM206918 ,
GSM206919 ,
GSM206920 ,
GSM206921 ,
GSM206922 ,
GSM206923 ,
GSM206924 ,
GSM206925 ,
GSM206926 ,
GSM206927 ,
GSM206928 ,
GSM206929 ,
GSM206930 ,
GSM206931 ,
GSM206932 ,
GSM206933 ,
GSM206934 ,
GSM206935 ,
GSM206936 ,
GSM206937 ,
GSM206938 ,
GSM206939 ,
GSM206940 ,
GSM206941 ,
GSM206942 ,
GSM206943 ,
GSM206944 ,
GSM206945 ,
GSM206946 ,
GSM206947 ,
GSM206948 ,
GSM206949 ,
GSM206950 ,
GSM206951 ,
GSM206952 ,
GSM206953 ,
GSM206954 ,
GSM206955 ,
GSM206956 ,
GSM206957 ,
GSM206958 ,
GSM206959 ,
GSM206960 ,
GSM206961 ,
GSM206962 ,
GSM206963 ,
GSM206964 ,
GSM206965 ,
GSM206966 ,
GSM206967 ,
GSM206968 ,
GSM206969 ,
GSM206970 ,
GSM206971 ,
GSM206972 ,
GSM206973 ,
GSM206974 ,
GSM206975 ,
GSM206976 ,
GSM206977 ,
GSM206978 ,
GSM206979 ,
GSM206980 ,
GSM206981 ,
GSM206982 ,
GSM324505 ,
GSM324511 Series (2)
GSE8350 mRNA expression profile in peripheral blood cells of RA patients following treatment with an anti-TNFa mAb, infliximab
GSE12926 mRNA profile in purified human peripheral blood eosinophil treated with retinoic acids
Data table header descriptions ID CLONE_ ID Gene Name GenBank accession #1 GenBank accession #2 GB_LIST GenBank accession numbers
GENE SYMBOL
Data table ID CLONE_ ID Gene Name GenBank accession #1 GenBank accession #2 GB_LIST GENE SYMBOL 1
JGS_1
Apolipoprotein C-I
X00570
NM_001645
X00570 , NM_001645 APOC1
2
JGS_2
ATP synthase 6/8
AF347011
AF347011
AF347011 , AF347011 3
JGS_3
cytochrome C oxidase 3
BC008342
AF347011
BC008342 , AF347011 4
JGS_4
cytochrome C oxidase 2
AF347014
AF347011
AF347014 , AF347011 5
JGS_5
alpha-1 antitrypsin; protease inhibitor 1
K01396
NM_000295
K01396 , NM_000295 SERPINA1
6
JGS_7
NADH dehydrogenase 4
AF347015
AF347011
AF347015 , AF347011 7
JGS_8
alpha-1 acid glycoprotein (Orosomucoid-1)
M13692
NM_000607
M13692 , NM_000607 ORM1
8
JGS_9
plasma retinol binding protein (RBP)
X00129
NM_006744
X00129 , NM_006744 RBP4
9
JGS_10
16S ribosomal RNA, mitochondrial
AF347015
AF347011
AF347015 , AF347011 10
JGS_11
NADH dehydrogenase 3
AF347015
AF347011
AF347015 , AF347011 11
JGS_12
cytochrome C oxidase 1
AF347001
AF347011
AF347001 , AF347011 12
JGS_13
NADH dehydrogenase 1
BC009345
AF347011
BC009345 , AF347011 13
JGS_14
aldolase B
X01098
X01098 ALDOB
14
JGS_16
ribosomal protein L41
AF026844
NM_021104
AF026844 , NM_021104 RPL41
15
JGS_17
elongation factor 1-alpha (EEF1A1)
X16869
NM_001402
X16869 , NM_001402 EEF1A1
16
JGS_18
L-alanine:glyoxylate aminotransferase
X53414
NM_000030
X53414 , NM_000030 AGXT
17
JGS_19
complement factor H (homologue)
M65293
NM_002113
M65293 , NM_002113 CFH
18
JGS_20
cytochrome P450 IIE1(ethanol-inducible)
J02843
NM_000773
J02843 , NM_000773 CYP2E1
19
JGS_21
aldehyde dehydrogenase 2 (ALDH2)
K03001
NM_000690
K03001 , NM_000690 ALDH2
20
JGS_22
alcohol dehydrogenase 4 class II (ADH4)
X56419
NM_000670
X56419 , NM_000670 ADH4
776 80 Kbytes .Supplementary data files not provided
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