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Platform GPL56 Query DataSets for GPL56
Status Public on Feb 12, 2002
Title y16
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description Tip Configuration: Standard 16-tip
Columns per Sector: 24
Column Spacing: 175
Row Spacing: 175
 
Submission date Feb 08, 2002
Last update date Jan 18, 2013
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (27) GSM908, GSM913, GSM914, GSM915, GSM916, GSM917 
Series (2)
GSE18 Yeast Stress Response
GSE3358 DNA damage responses and Mec1p

Data table header descriptions
ID unique spot identifier
ORF spot name
SPOT_ID control
GENE_NAME gene name
CHROMOSOME chromosome number
STRAND genomic DNA strand upon which gene sequence is placed
BEG_COORD beginning coordinate of gene sequence on genomic DNA
END_COORD ending coordinate of gene sequence on genomic DNA
PROCESS gene process
FUNCTION gene function
DS_GENE_1
DS_GENE_2
SECTOR sector of spot print location
SECTORROW sector row of spot print location
SECTORCOL sector column of spot print location
PLATE clone plate number
PROW clone plate row
PCOL clone plate column
FAILED
IS_CONTAMINATED

Data table
ID ORF SPOT_ID GENE_NAME CHROMOSOME STRAND BEG_COORD END_COORD PROCESS FUNCTION DS_GENE_1 DS_GENE_2 SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED
1 YBR160W CDC28 2 W 560035 560931 protein phosphorylation* cyclin-dependent protein kinase YBR161W 1 1 1 1 A 1 0 U
2 YBR162C TOS1 2 C 564528 563161 YBR162W-A (YSY6) 1 1 2 1 A 5 0 U
3 YBR163W DEM1 2 W 565681 567438 biological_process unknown molecular_function unknown 1 1 3 1 A 9 0 U
4 YBR165W UBS1 2 W 568810 569643 YBR164C (ARL1) 1 1 4 1 A 13 0 U
5 YBR167C POP7 2 C 571848 571426 rRNA processing* ribonuclease MRP* YBR166C (TYR1) YBR168W 1 1 5 1 A 17 0 U
6 YBR169C SSE2 2 C 575954 573873 protein folding heat shock protein 1 1 6 1 A 21 0 U
7 YBR255W 2 W 724414 726498 biological_process unknown molecular_function unknown YBR254C (TRS20) 1 1 7 1 E 1 0 U
8 YBR257W POP4 2 W 728843 729682 rRNA processing* ribonuclease MRP* YBR256C (RIB5) 1 1 8 1 E 5 0 U
9 YBR259W 2 W 730345 732411 biological_process unknown molecular_function unknown YBR258C 1 1 9 1 E 9 0 U
10 YBR261C 2 C 735488 734790 biological_process unknown molecular_function unknown YBR260C (RGD1) 1 1 10 1 E 13 0 U
11 YBR263W SHM1 2 W 735997 737694 glycine hydroxymethyltransferase YBR262C 1 1 11 1 E 17 0 U
12 YBR265W TSC10 2 W 738540 739502 YBR264C (YPT10) 1 1 12 1 E 21 0 U
13 YCL050C APA1 3 C 38801 37836 ATP adenylyltransferase 1 1 13 1 I 1 0 U
14 YCL052C PBN1 3 C 35393 34143 YCL051W (LRE1) 1 1 14 1 I 5 0 U
15 YCL054W SPB1 3 W 31449 33974 rRNA processing RNA methyltransferase 1 1 15 1 I 9 0 U
16 YCL056C 3 C 27359 26925 biological_process unknown molecular_function unknown YCL055W (KAR4) 1 1 16 1 I 13 0 U
17 YCL058C FYV5 3 C 23981 23523 biological_process unknown molecular_function unknown YCL059C (KRR1) YCL057W (PRD1) 1 1 17 1 I 17 0 U
18 YCL060C 1 1 18 1 I 21 0 U
19 YCR058C 1 1 19 1 M 1 0 U
20 YCR060W 3 W 224391 224726 biological_process unknown molecular_function unknown YCR059C (YIH1) YCR061W 1 1 20 1 M 5 0 U

Total number of rows: 8448

Table truncated, full table size 818 Kbytes.






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