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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 21, 2007 |
| Title |
[Dm35b_MR] Affymetrix Drosophila Tiling 1.0R Array |
| Technology type |
in situ oligonucleotide |
| Distribution |
commercial |
| Organism |
Drosophila melanogaster |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
see manufacturer's web site
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| Description |
Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
This is the first generation of the Drosophila 1.0R Tiling Arrays. The Drosophila Tiling 1.0R Array uses 25-mer oligonucleotide probes, spaced evenly across the Drosophila genome at intervals of approximately 35 base pairs as measured from the center of a probe to the center position of the adjacent probe. Repetitive sequences were eliminated from the design using RepeatMasker software.
BPMAP and other files can be downloaded from the Affymetrix Web site below.
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| Web link |
http://www.affymetrix.com/products/arrays/specific/drosophila_tiling1_0r.affx
http://www.affymetrix.com/support/technical/libraryfilesmain.affx
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| Submission date |
Sep 21, 2007 |
| Last update date |
Jun 03, 2009 |
| Organization |
Affymetrix, Inc. |
| E-mail(s) |
geo@ncbi.nlm.nih.gov, support@affymetrix.com
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| Phone |
888-362-2447
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| URL |
http://www.affymetrix.com/index.affx
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| Street address |
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| City |
Santa Clara |
| State/province |
CA |
| ZIP/Postal code |
95051 |
| Country |
USA |
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| Samples (103)
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GSM231023, GSM231024, GSM231025, GSM231026, GSM231027, GSM278336
GSM278337, GSM278338, GSM278339, GSM278340, GSM278341, GSM278342, GSM278343, GSM278344, GSM278345, GSM278346, GSM278347, GSM278348, GSM278349, GSM278350, GSM278351, GSM278352, GSM278353, GSM278354, GSM278355, GSM278356, GSM278357, GSM278358, GSM278359, GSM278360, GSM278361, GSM278362, GSM278363, GSM278364, GSM278365, GSM278366, GSM278367, GSM278368, GSM278369, GSM336362, GSM336363, GSM336364, GSM336365, GSM336366, GSM336367, GSM336368, GSM336369, GSM351033, GSM351034, GSM351035, GSM351036, GSM351037, GSM351038, GSM356322, GSM356323, GSM356324, GSM356325, GSM356326, GSM356327, GSM435267, GSM435268, GSM435269, GSM435270, GSM435271, GSM435272, GSM435273, GSM435274, GSM435275, GSM435276, GSM435277, GSM435278, GSM435279, GSM435280, GSM435281, GSM435282, GSM435283, GSM435284, GSM435285, GSM435286, GSM435287, GSM435288, GSM435289, GSM435290, GSM440112, GSM441283, GSM441284, GSM441285, GSM452293, GSM452294, GSM454350, GSM454355, GSM454359, GSM454361, GSM454366, GSM454368, GSM454376, GSM454377, GSM454378, GSM454531, GSM454532, GSM454533, GSM1020359, GSM1020360
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| Series (15)
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| GSE9087 |
Drosophila Myb-MuvB/dREAM (ChIP-chip data) |
| GSE9088 |
Drosophila Myb-MuvB/dREAM |
| GSE11006 |
Drosophila Polycomb and Pleiohomeotic genomic binding in 0-16h embryos and L3 larval discs (ChIP-on-chip) |
| GSE13328 |
Chromatin structure marks cell-type and gender specific replication of the Drosophila genome |
| GSE13940 |
Genome-wide analysis of alternative pre-mRNA splicing of the Drosophila hnRNP A/B family members |
| GSE13941 |
RIP_Chip_analysis |
| GSE14215 |
Genome wide identification of targets of the drosha-pasha/DGCR8 complex |
| GSE17453 |
Regulatory divergence in Drosophila melanogaster and D. simulans: a genome-wide analysis of allele-specific expression |
| GSE17628 |
Tiling arrays from control and flies without Drosha or Pasha |
| GSE17629 |
Circadian analysis of miRNAs and their targets |
| GSE17697 |
Complex patterns of accessibility discriminate sites of PcG repression, H4K16 acetylation and replication initiation |
| GSE18092 |
Heterochromatin protein 1 (HP1) modulates replication timing of Drosophila heterochromatin |
| GSE18100 |
Distribution of PcG, TrxG, RNA Pol II and associated histone marks in ML-DmBG3-c2 cells |
| GSE18176 |
Distribution of TrxG, RNA Pol II and associated histone marks in Sg4 cells |
| GSE41628 |
Genome-wide Tinman binding sites in early and late Drosophila embryos |
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| Supplementary data files not provided |
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