GEO help: Mouse over screen elements for information.
Status
Public on Nov 13, 2007
Title
Sentrix Human-6 v2 Expression BeadChip
Technology type
oligonucleotide beads
Distribution
commercial
Organism
Homo sapiens Manufacturer
Illumina
Manufacture protocol
Enables genome-wide expression analysis of multiple samples in parallel on a single microarray. Researchers can profile more than 48,000 transcript probes per sample.
Submission date
Nov 08, 2007
Last update date
Jan 18, 2013
Contact name
GEO admin
E-mail(s)
geo@ncbi.nlm.nih.gov Organization name
NCBI/NLM/NIH
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (743)
GSM242119 , GSM242120 , GSM242121 , GSM242122 , GSM242123 , GSM242125
GSM242127 ,
GSM242128 ,
GSM242129 ,
GSM242130 ,
GSM242131 ,
GSM242132 ,
GSM242133 ,
GSM242134 ,
GSM242135 ,
GSM242642 ,
GSM242643 ,
GSM242644 ,
GSM242645 ,
GSM242646 ,
GSM242647 ,
GSM242648 ,
GSM242649 ,
GSM247888 ,
GSM247889 ,
GSM247890 ,
GSM247891 ,
GSM247892 ,
GSM247895 ,
GSM247896 ,
GSM247897 ,
GSM247898 ,
GSM247900 ,
GSM247901 ,
GSM247902 ,
GSM247903 ,
GSM247904 ,
GSM247905 ,
GSM247906 ,
GSM247907 ,
GSM247908 ,
GSM247909 ,
GSM247911 ,
GSM247912 ,
GSM247913 ,
GSM247914 ,
GSM247915 ,
GSM247916 ,
GSM247917 ,
GSM247918 ,
GSM247919 ,
GSM247920 ,
GSM247921 ,
GSM247922 ,
GSM247923 ,
GSM247924 ,
GSM247925 ,
GSM247926 ,
GSM247927 ,
GSM247928 ,
GSM247929 ,
GSM247930 ,
GSM247931 ,
GSM247932 ,
GSM247933 ,
GSM247934 ,
GSM305703 ,
GSM305704 ,
GSM305705 ,
GSM305706 ,
GSM305707 ,
GSM305708 ,
GSM305709 ,
GSM305710 ,
GSM305711 ,
GSM305712 ,
GSM305713 ,
GSM305714 ,
GSM305715 ,
GSM305716 ,
GSM305717 ,
GSM305718 ,
GSM305719 ,
GSM305720 ,
GSM305721 ,
GSM305722 ,
GSM305723 ,
GSM305724 ,
GSM305725 ,
GSM305726 ,
GSM305727 ,
GSM305728 ,
GSM305729 ,
GSM305730 ,
GSM305731 ,
GSM305732 ,
GSM305733 ,
GSM305734 ,
GSM305735 ,
GSM305736 ,
GSM305737 ,
GSM305738 ,
GSM305739 ,
GSM305740 ,
GSM305741 ,
GSM305742 ,
GSM305743 ,
GSM305744 ,
GSM305745 ,
GSM305746 ,
GSM305747 ,
GSM305748 ,
GSM305749 ,
GSM305750 ,
GSM305751 ,
GSM305752 ,
GSM305753 ,
GSM305754 ,
GSM305755 ,
GSM305756 ,
GSM305757 ,
GSM305758 ,
GSM305759 ,
GSM305760 ,
GSM305761 ,
GSM305762 ,
GSM305763 ,
GSM305764 ,
GSM305765 ,
GSM305766 ,
GSM305767 ,
GSM305768 ,
GSM305769 ,
GSM305770 ,
GSM305771 ,
GSM305772 ,
GSM305773 ,
GSM305774 ,
GSM326090 ,
GSM326091 ,
GSM326092 ,
GSM326093 ,
GSM326094 ,
GSM326095 ,
GSM326096 ,
GSM326097 ,
GSM326098 ,
GSM326099 ,
GSM326100 ,
GSM326101 ,
GSM326102 ,
GSM326103 ,
GSM326104 ,
GSM326105 ,
GSM326106 ,
GSM326107 ,
GSM326108 ,
GSM326109 ,
GSM326110 ,
GSM326111 ,
GSM326112 ,
GSM326113 ,
GSM326114 ,
GSM326115 ,
GSM326116 ,
GSM326117 ,
GSM326118 ,
GSM326119 ,
GSM326120 ,
GSM326121 ,
GSM326122 ,
GSM326161 ,
GSM326162 ,
GSM326163 ,
GSM326164 ,
GSM326165 ,
GSM326166 ,
GSM326167 ,
GSM326168 ,
GSM326169 ,
GSM326170 ,
GSM326171 ,
GSM326172 ,
GSM326173 ,
GSM326174 ,
GSM326175 ,
GSM326176 ,
GSM326177 ,
GSM326178 ,
GSM326179 ,
GSM326180 ,
GSM326181 ,
GSM326182 ,
GSM326183 ,
GSM326184 ,
GSM326185 ,
GSM326186 ,
GSM326187 ,
GSM326188 ,
GSM326189 ,
GSM326190 ,
GSM326191 ,
GSM326192 ,
GSM326193 ,
GSM326194 ,
GSM401265 ,
GSM401266 ,
GSM401267 ,
GSM401268 ,
GSM401269 ,
GSM401270 ,
GSM401271 ,
GSM401272 ,
GSM401273 ,
GSM401274 ,
GSM401275 ,
GSM401276 ,
GSM401277 ,
GSM401278 ,
GSM401279 ,
GSM401280 ,
GSM401281 ,
GSM401282 ,
GSM401283 ,
GSM401284 ,
GSM401285 ,
GSM401286 ,
GSM401287 ,
GSM401288 ,
GSM403550 ,
GSM403555 ,
GSM403560 ,
GSM403561 ,
GSM403562 ,
GSM403563 ,
GSM403564 ,
GSM403566 ,
GSM403567 ,
GSM403568 ,
GSM403569 ,
GSM403570 ,
GSM403571 ,
GSM403572 ,
GSM403573 ,
GSM403574 ,
GSM403575 ,
GSM403576 ,
GSM416714 ,
GSM416715 ,
GSM416716 ,
GSM416717 ,
GSM416718 ,
GSM416719 ,
GSM416720 ,
GSM416721 ,
GSM416722 ,
GSM416723 ,
GSM416724 ,
GSM416725 ,
GSM416726 ,
GSM416727 ,
GSM416728 ,
GSM416729 ,
GSM416730 ,
GSM416731 ,
GSM431601 ,
GSM431602 ,
GSM431603 ,
GSM431604 ,
GSM431605 ,
GSM431606 ,
GSM431607 ,
GSM431608 ,
GSM431609 ,
GSM431610 ,
GSM431611 ,
GSM431612 ,
GSM431613 ,
GSM431614 ,
GSM431615 ,
GSM431616 ,
GSM431617 ,
GSM431618 ,
GSM431619 ,
GSM431620 ,
GSM438136 ,
GSM438137 ,
GSM438138 ,
GSM438139 ,
GSM438140 ,
GSM438141 ,
GSM438142 ,
GSM438143 ,
GSM438144 ,
GSM438145 ,
GSM438146 ,
GSM438147 ,
GSM438148 ,
GSM438149 ,
GSM438150 ,
GSM438151 ,
GSM438152 ,
GSM438153 ,
GSM438154 ,
GSM438155 ,
GSM438156 ,
GSM438157 ,
GSM438158 ,
GSM438159 ,
GSM438160 ,
GSM438161 ,
GSM438162 ,
GSM438163 ,
GSM438164 ,
GSM438165 ,
GSM438166 ,
GSM438167 ,
GSM438168 ,
GSM438169 ,
GSM438170 ,
GSM438171 ,
GSM438172 ,
GSM438173 ,
GSM438174 ,
GSM438175 ,
GSM438176 ,
GSM438177 ,
GSM438178 ,
GSM438179 ,
GSM438180 ,
GSM438181 ,
GSM438182 ,
GSM438183 ,
GSM438184 ,
GSM438185 ,
GSM438186 ,
GSM438187 ,
GSM438188 ,
GSM438189 ,
GSM438190 ,
GSM438191 ,
GSM438192 ,
GSM438193 ,
GSM438194 ,
GSM438195 ,
GSM438196 ,
GSM438197 ,
GSM438198 ,
GSM438199 ,
GSM438200 ,
GSM438201 ,
GSM438202 ,
GSM438203 ,
GSM438204 ,
GSM438205 ,
GSM438206 ,
GSM438207 ,
GSM438208 ,
GSM438209 ,
GSM438210 ,
GSM438211 ,
GSM438212 ,
GSM438213 ,
GSM438214 ,
GSM438215 ,
GSM438216 ,
GSM438217 ,
GSM438218 ,
GSM438219 ,
GSM438220 ,
GSM439486 ,
GSM439487 ,
GSM439488 ,
GSM439489 ,
GSM439490 ,
GSM439491 ,
GSM439492 ,
GSM439493 ,
GSM439494 ,
GSM439495 ,
GSM439496 ,
GSM439497 ,
GSM439498 ,
GSM439499 ,
GSM439500 ,
GSM439501 ,
GSM439502 ,
GSM439503 ,
GSM439504 ,
GSM439505 ,
GSM444310 ,
GSM444311 ,
GSM444312 ,
GSM444313 ,
GSM452094 ,
GSM452095 ,
GSM452096 ,
GSM452097 ,
GSM452098 ,
GSM452099 ,
GSM452100 ,
GSM452101 ,
GSM452102 ,
GSM452103 ,
GSM452104 ,
GSM452105 ,
GSM452106 ,
GSM452107 ,
GSM452108 ,
GSM452109 ,
GSM452110 ,
GSM452111 ,
GSM452112 ,
GSM452113 ,
GSM452114 ,
GSM452115 ,
GSM452116 ,
GSM452117 ,
GSM452118 ,
GSM452119 ,
GSM452120 ,
GSM452121 ,
GSM452122 ,
GSM452123 ,
GSM452124 ,
GSM452125 ,
GSM452126 ,
GSM455826 ,
GSM455827 ,
GSM455828 ,
GSM455829 ,
GSM455830 ,
GSM455831 ,
GSM455832 ,
GSM455833 ,
GSM455834 ,
GSM455835 ,
GSM455836 ,
GSM455837 ,
GSM475354 ,
GSM475355 ,
GSM475356 ,
GSM475357 ,
GSM475358 ,
GSM475359 ,
GSM475360 ,
GSM475361 ,
GSM475362 ,
GSM475363 ,
GSM475364 ,
GSM475365 ,
GSM475366 ,
GSM475367 ,
GSM475368 ,
GSM475369 ,
GSM475370 ,
GSM475371 ,
GSM475372 ,
GSM475373 ,
GSM475374 ,
GSM475375 ,
GSM475376 ,
GSM475377 ,
GSM475378 ,
GSM475379 ,
GSM475380 ,
GSM475381 ,
GSM475382 ,
GSM475383 ,
GSM475384 ,
GSM475385 ,
GSM475386 ,
GSM475387 ,
GSM475388 ,
GSM475389 ,
GSM475390 ,
GSM475391 ,
GSM475392 ,
GSM475393 ,
GSM475394 ,
GSM475395 ,
GSM475396 ,
GSM475397 ,
GSM475398 ,
GSM475399 ,
GSM475400 ,
GSM475401 ,
GSM475402 ,
GSM475403 ,
GSM475404 ,
GSM475405 ,
GSM475406 ,
GSM475407 ,
GSM475408 ,
GSM475409 ,
GSM475410 ,
GSM475411 ,
GSM475412 ,
GSM475413 ,
GSM475414 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (24)
GSE9583 Macgoren-Abnornal karyotype
GSE9589 Microvesicular mRNA profiling of SW480 human colorectal adenocarcinoma cells
GSE9822 Expression profiling in lymphoblastoid cell lines of family with maternally inherited non-syndromic hearing loss.
GSE12124 In vitro response of fibroblasts isolated from patients with immunodeficiencies
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis
GSE16031 A comparison of Illumina bead chips reveals unexpected challenges in the use of newest generation microarrays
GSE16129 Enhanced Monocyte Response & Decreased Central Memory T Cells in Children with Invasive Staphylococcus aureus Infections
GSE16576 Transcription profiling of Hepatitis C – specific natural CD25pos cells
GSE17241 Genome-wide analysis of SATB1 target genes in human T helper cells
GSE17590 Anakinra in Systemic-onset Juvenile Idiopathic Arthritis
GSE17606 TNF dependent induction of inhibitory pathways in CD4+ T cells in HIV and LCMV [HIV-infected individuals]
GSE17802 The role of vimentin in regulating genes related to EMT
GSE18084 Gene Expression Analysis of IgM+CD27+ B Cells in HCV-Infected Individuals with Mixed Cryoglobulinemia
GSE18237 Genome functional screening identifies GAB2 as a key promoter of anchorage independence in normal and neoplastic cells
GSE19177 Subtypes of familial breast tumors revealed by expression and copy number profiling
GSE21983 The discovery and validation of ten-gene prognostic classifier in gastric cancer by whole genome expression profiling
GSE23848 Peripheral blood gene-expression in depressed subjects with bipolar disorder vs healthy controls.
GSE24395 Genome-wide comparison of AML leukemic stem cells (LSCs) and normal human hematopoietic stem cells (HSCs).
GSE27427 Transcriptional profiles of pediatric SLE neutrophils and Healthy neutrophils cultured with SLE sera or Interferon
GSE38308 Whole genome expression data from pre-auricular and post-auricular skin tissues
GSE52185 TNF dependent induction of inhibitory pathways in CD4+ T cells in HIV and LCMV
GSE61144 Expression data from blood samples of STEMI and Same STEMI patients after PIC
GSE61145 Identification of Novel Serum Biomarkers for Early Decision of ST-elevation Myocardial Infarction
GSE135644 Expression data of EBV-positive and EBV-negative subclones of gastric adenocarcinoma cell line AGS
Relations Alternative to
GPL6102 (official)
Data table header descriptions ID Illumina ProbeID
Search_key Target GI GI number
Transcript GB_ACC GenBank accession number
Symbol Type Start SEQUENCE Definition Ontology Synonym
Data table ID Search_key Target GI Transcript GB_ACC Symbol Type Start SEQUENCE Definition Ontology Synonym 4760445
ILMN_89282
ILMN_89282
23525203 Hs.388528
BU678343 S
349
CTCTCTAAAGGGACAACAGAGTGGACAGTCAAGGAACTCCACATATTCAT
"UI-CF-EC0-abi-c-12-0-UI.s1 UI-CF-EC0 Homo sapiens cDNA clone UI-CF-EC0-abi-c-12-0-UI 3, mRNA sequence"
2760372
ILMN_35826
ILMN_35826
89042416 XM_497527.2
XM_497527.2 LOC441782
S
902
GGGGTCAAGCCCAGGTGAAATGTGGATTGGAAAAGTGCTTCCCTTGCCCC
"PREDICTED: Homo sapiens similar to spectrin domain with coiled-coils 1 (LOC441782), mRNA."
630309
ILMN_25544
ILMN_25544
46358420 NM_018433.3
NM_018433.3 JMJD1A
S
4359
CCAGGCTGTAAAAGCAAAACCTCGTATCAGCTCTGGAACAATACCTGCAG
"Homo sapiens jumonji domain containing 1A (JMJD1A), mRNA."
TSGA; JMJD1; KIAA0742; DKFZp686A24246; DKFZp686P07111
5080372
ILMN_132331
ILMN_132331
7376124 Hs.580150
AW629334 S
117
CCAGACAGGAAGCATCAAGCCCTTCAGGAAAGAATATGCGAGAGTGCTGC
"hi56g05.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2976344 3, mRNA sequence"
1230195
ILMN_105017
ILMN_105017
5437312 Hs.540210
AI818233 S
304
TGTGCAGAAAGCTGATGGAAGGGAGAAAGAATGGAAGTGGGTCACACAGC
"wk77d04.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2421415 3, mRNA sequence"
2100719
ILMN_75398
ILMN_75398
20360910 Hs.116531
BQ185359 S
486
GCGCCTTCCGACAAGGAAAGTGTTTAGTGTCCATCGGTCTGGTGGGTGGC
"UI-E-EJ1-aju-p-07-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-aju-p-07-0-UI 3, mRNA sequence"
4590398
ILMN_10519
ILMN_10519
32307123 NM_006534.2
NM_006534.2 NCOA3
A
7834
CCACATGAAATGACTTATGGGGGATGGTGAGCTGTGACTGCTTTGCTGAC
"Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript variant 2, mRNA."
"positive regulation of transcription, DNA-dependent [goid 45893] [pmid 15572661] [evidence NAS]; androgen receptor signaling pathway [goid 30521] [pmid 15572661] [evidence NAS]; signal transduction [goid 7165] [evidence IEA]; thyroid hormone receptor binding [goid 46966] [pmid 9346901] [evidence NAS]; signal transducer activity [goid 4871] [evidence IEA]; transcription coactivator activity [goid 3713] [pmid 15572661] [evidence NAS]; protein binding [goid 5515] [pmid 11279242] [evidence IPI]; acyltransferase activity [goid 8415] [evidence IEA]; histone acetyltransferase activity [goid 4402] [pmid 9267036] [evidence TAS]; transferase activity [goid 16740] [evidence IEA]; androgen receptor binding [goid 50681] [pmid 15572661] [evidence NAS]; transcription regulator activity [goid 30528] [evidence IEA]; nucleus [goid 5634] [pmid 9267036] [evidence NAS]"
ACTR; AIB1; RAC3; SRC3; pCIP; CTG26; CAGH16; TNRC14; TNRC16; TRAM-1
3450348
ILMN_117209
ILMN_117209
3246329 Hs.564563
AI026841 S
137
GGGTGGAGTGATTGCTACCTCCAGGCATGATCTTTGTCACCTGGCTGAGG
"ow02h05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1645689 3 similar to contains Alu repetitive element;, mRNA sequence"
4060411
ILMN_17234
ILMN_17234
61966764 NM_001013655.1
NM_001013655.1 LOC389834
S
3938
CCATTGGTTCTGTTTGGCATAACCCTATTAAATGGTGCGCAGAGCTGAAT
"Homo sapiens hypothetical gene supported by AK123403 (LOC389834), mRNA."
5570379
ILMN_19244
ILMN_19244
48255961 NM_152460.2
NM_152460.2 C17orf77
S
2292
GATACAATGGATTTTGGGGACTTAGGGGAAAGGATGCAGGGGATGAGGGA
"Homo sapiens chromosome 17 open reading frame 77 (C17orf77), mRNA."
FLJ31882
2900162
ILMN_1567
ILMN_1567
21361723 NM_018698.3
NM_018698.3 NXT2
S
2605
ATGGCTGGAACTACTCGTATAAGGACTAGACTGTATTTTTGACATGCTCC
"Homo sapiens nuclear transport factor 2-like export factor 2 (NXT2), mRNA."
mRNA processing [goid 6397] [evidence IEA]; mRNA-nucleus export [goid 6406] [evidence IEA]; transport [goid 6810] [evidence IEA]; protein transport [goid 15031] [evidence IEA]; transporter activity [goid 5215] [evidence IEA]; intracellular [goid 5622] [evidence IEA]; nucleus [goid 5634] [evidence IEA]
P15-2
730754
ILMN_25274
ILMN_25274
55749741 NM_019024.1
NM_019024.1 KIAA1414
S
6243
GGCTGCCAGACAACCAGCCCCCGCCATACATTCTGCACCAACAATTAAGC
"Homo sapiens KIAA1414 protein (KIAA1414), mRNA."
mitotic chromosome condensation [goid 7076] [evidence IEA]; binding [goid 5488] [evidence IEA]
70524
ILMN_2520
ILMN_2520
23238260 NM_152253.1
NM_152253.1 CHKB
I
409
GTGGGAGGTCAGGGGTCAGCCTCTCCGGTGCGCGGATCGGGGTCAGGGGT
"Homo sapiens choline kinase beta (CHKB), transcript variant 2, mRNA."
transferase activity [goid 16740] [evidence IEA]; ethanolamine kinase activity [goid 4305] [evidence IEA]
CHKL; CHETK
7400253
ILMN_17249
ILMN_17249
12669916 NM_001951.2
NM_001951.2 E2F5
S
957
CTTCTGACGTGTTTCCTCTCTTAAGGCTTTCTCCTACCCCGGCAGATGAC
"Homo sapiens E2F transcription factor 5, p130-binding (E2F5), mRNA."
"regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]; regulation of cell cycle [goid 74] [pmid 7892279] [evidence TAS]; transcription [goid 6350] [evidence IEA]; protein binding [goid 5515] [pmid 7760804] [evidence TAS]; transcription factor activity [goid 3700] [pmid 7892279] [evidence NAS]; transcription factor complex [goid 5667] [evidence IEA]; nucleus [goid 5634] [evidence IEA]"
E2F-5
50136
ILMN_132251
ILMN_132251
15448569 Hs.580070
BI561255 S
682
CTGTTATCGGAGGGTCCGTGGCACTTCTCTTGCCTGGATCAAACGGTGAC
"603256406F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:5298936 5, mRNA sequence"
6100431
ILMN_118745
ILMN_118745
5887203 Hs.566417
AW028447 S
103
TTAAAGAACCAGGAAATGTAGAAAATTAGTTGCCTGTCCATAGGGATCTT
"wv89c11.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2541332 3, mRNA sequence"
2600689
ILMN_118938
ILMN_118938
2901930 Hs.566667
AA828831 S
190
TGGTTATCAGGGGCTTGCAGTGTGAGGGATGTGGAAATTAGGTCAAAAGG
"od80c01.s1 NCI_CGAP_Ov2 Homo sapiens cDNA clone IMAGE:1374240, mRNA sequence"
3850164
ILMN_103363
ILMN_103363
33197153 Hs.537570
CF123192 S
171
CATTGTGCAAAGTCATGCTGCTTCGAATTATGCTGCGCGCTGGCACACAG
"UI-HF-CH0.1-aue-b-02-0-UI.r1 NIH_MGC_211 Homo sapiens cDNA clone IMAGE:30573133 5, mRNA sequence"
460161
ILMN_2384
ILMN_2384
40807468 NM_005879.2
NM_005879.2 TRAIP
S
1609
TCGGGACCAGCCTGAGGTGTAAGGGCAGACAAACAGGTGAGGGTGAGTGT
"Homo sapiens TRAF interacting protein (TRAIP), mRNA."
cell proliferation [goid 8283] [pmid 9104814] [evidence TAS]; induction of apoptosis [goid 6917] [pmid 9104814] [evidence TAS]; signal transduction [goid 7165] [pmid 9104814] [evidence TAS]; metal ion binding [goid 46872] [evidence IEA]; zinc ion binding [goid 8270] [evidence IEA]; protein binding [goid 5515] [evidence IEA]
TRIP; RNF206
3520338
ILMN_21047
ILMN_21047
27437044 NM_172313.1
NM_172313.1 CSF3R
A
2239
CCTTGGCACGCCACCCATCACCAAGCTCACAGTGCTGGAGGAGGATGAAA
"Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R), transcript variant 4, mRNA."
signal transduction [goid 7165] [pmid 1371413] [evidence NAS]; defense response [goid 6952] [pmid 7542747] [evidence TAS]; cell adhesion [goid 7155] [evidence IEA]; protein binding [goid 5515] [evidence IEA]; receptor activity [goid 4872] [pmid 7542747] [evidence TAS]; hematopoietin/interferon-class (D200-domain) cytokine receptor activity [goid 4896] [evidence IEA]; membrane [goid 16020] [evidence IEA]; integral to plasma membrane [goid 5887] [pmid 7542747] [evidence TAS]
CD114; GCSFR
48701 16420 Kbytes .Supplementary data files not provided
Less...
More...