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Platform GPL6106 Query DataSets for GPL6106
Status Public on Nov 13, 2007
Title Sentrix Human-6 v2 Expression BeadChip
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina
Manufacture protocol Enables genome-wide expression analysis of multiple samples in parallel on a single microarray. Researchers can profile more than 48,000 transcript probes per sample.
Submission date Nov 08, 2007
Last update date Jan 18, 2013
Contact name GEO admin
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Samples (743) GSM242119, GSM242120, GSM242121, GSM242122, GSM242123, GSM242125 
Series (24)
GSE9583 Macgoren-Abnornal karyotype
GSE9589 Microvesicular mRNA profiling of SW480 human colorectal adenocarcinoma cells
GSE9822 Expression profiling in lymphoblastoid cell lines of family with maternally inherited non-syndromic hearing loss.
Alternative to GPL6102 (official)

Data table header descriptions
ID Illumina ProbeID
GI GI number
GB_ACC GenBank accession number

Data table
ID Search_key Target GI Transcript GB_ACC Symbol Type Start SEQUENCE Definition Ontology Synonym
4760445 ILMN_89282 ILMN_89282 23525203 Hs.388528 BU678343 S 349 CTCTCTAAAGGGACAACAGAGTGGACAGTCAAGGAACTCCACATATTCAT "UI-CF-EC0-abi-c-12-0-UI.s1 UI-CF-EC0 Homo sapiens cDNA clone UI-CF-EC0-abi-c-12-0-UI 3, mRNA sequence"
2760372 ILMN_35826 ILMN_35826 89042416 XM_497527.2 XM_497527.2 LOC441782 S 902 GGGGTCAAGCCCAGGTGAAATGTGGATTGGAAAAGTGCTTCCCTTGCCCC "PREDICTED: Homo sapiens similar to spectrin domain with coiled-coils 1 (LOC441782), mRNA."
630309 ILMN_25544 ILMN_25544 46358420 NM_018433.3 NM_018433.3 JMJD1A S 4359 CCAGGCTGTAAAAGCAAAACCTCGTATCAGCTCTGGAACAATACCTGCAG "Homo sapiens jumonji domain containing 1A (JMJD1A), mRNA." TSGA; JMJD1; KIAA0742; DKFZp686A24246; DKFZp686P07111
5080372 ILMN_132331 ILMN_132331 7376124 Hs.580150 AW629334 S 117 CCAGACAGGAAGCATCAAGCCCTTCAGGAAAGAATATGCGAGAGTGCTGC "hi56g05.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2976344 3, mRNA sequence"
1230195 ILMN_105017 ILMN_105017 5437312 Hs.540210 AI818233 S 304 TGTGCAGAAAGCTGATGGAAGGGAGAAAGAATGGAAGTGGGTCACACAGC "wk77d04.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2421415 3, mRNA sequence"
2100719 ILMN_75398 ILMN_75398 20360910 Hs.116531 BQ185359 S 486 GCGCCTTCCGACAAGGAAAGTGTTTAGTGTCCATCGGTCTGGTGGGTGGC "UI-E-EJ1-aju-p-07-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-aju-p-07-0-UI 3, mRNA sequence"
4590398 ILMN_10519 ILMN_10519 32307123 NM_006534.2 NM_006534.2 NCOA3 A 7834 CCACATGAAATGACTTATGGGGGATGGTGAGCTGTGACTGCTTTGCTGAC "Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript variant 2, mRNA." "positive regulation of transcription, DNA-dependent [goid 45893] [pmid 15572661] [evidence NAS]; androgen receptor signaling pathway [goid 30521] [pmid 15572661] [evidence NAS]; signal transduction [goid 7165] [evidence IEA]; thyroid hormone receptor binding [goid 46966] [pmid 9346901] [evidence NAS]; signal transducer activity [goid 4871] [evidence IEA]; transcription coactivator activity [goid 3713] [pmid 15572661] [evidence NAS]; protein binding [goid 5515] [pmid 11279242] [evidence IPI]; acyltransferase activity [goid 8415] [evidence IEA]; histone acetyltransferase activity [goid 4402] [pmid 9267036] [evidence TAS]; transferase activity [goid 16740] [evidence IEA]; androgen receptor binding [goid 50681] [pmid 15572661] [evidence NAS]; transcription regulator activity [goid 30528] [evidence IEA]; nucleus [goid 5634] [pmid 9267036] [evidence NAS]" ACTR; AIB1; RAC3; SRC3; pCIP; CTG26; CAGH16; TNRC14; TNRC16; TRAM-1
3450348 ILMN_117209 ILMN_117209 3246329 Hs.564563 AI026841 S 137 GGGTGGAGTGATTGCTACCTCCAGGCATGATCTTTGTCACCTGGCTGAGG "ow02h05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1645689 3 similar to contains Alu repetitive element;, mRNA sequence"
4060411 ILMN_17234 ILMN_17234 61966764 NM_001013655.1 NM_001013655.1 LOC389834 S 3938 CCATTGGTTCTGTTTGGCATAACCCTATTAAATGGTGCGCAGAGCTGAAT "Homo sapiens hypothetical gene supported by AK123403 (LOC389834), mRNA."
5570379 ILMN_19244 ILMN_19244 48255961 NM_152460.2 NM_152460.2 C17orf77 S 2292 GATACAATGGATTTTGGGGACTTAGGGGAAAGGATGCAGGGGATGAGGGA "Homo sapiens chromosome 17 open reading frame 77 (C17orf77), mRNA." FLJ31882
2900162 ILMN_1567 ILMN_1567 21361723 NM_018698.3 NM_018698.3 NXT2 S 2605 ATGGCTGGAACTACTCGTATAAGGACTAGACTGTATTTTTGACATGCTCC "Homo sapiens nuclear transport factor 2-like export factor 2 (NXT2), mRNA." mRNA processing [goid 6397] [evidence IEA]; mRNA-nucleus export [goid 6406] [evidence IEA]; transport [goid 6810] [evidence IEA]; protein transport [goid 15031] [evidence IEA]; transporter activity [goid 5215] [evidence IEA]; intracellular [goid 5622] [evidence IEA]; nucleus [goid 5634] [evidence IEA] P15-2
730754 ILMN_25274 ILMN_25274 55749741 NM_019024.1 NM_019024.1 KIAA1414 S 6243 GGCTGCCAGACAACCAGCCCCCGCCATACATTCTGCACCAACAATTAAGC "Homo sapiens KIAA1414 protein (KIAA1414), mRNA." mitotic chromosome condensation [goid 7076] [evidence IEA]; binding [goid 5488] [evidence IEA]
70524 ILMN_2520 ILMN_2520 23238260 NM_152253.1 NM_152253.1 CHKB I 409 GTGGGAGGTCAGGGGTCAGCCTCTCCGGTGCGCGGATCGGGGTCAGGGGT "Homo sapiens choline kinase beta (CHKB), transcript variant 2, mRNA." transferase activity [goid 16740] [evidence IEA]; ethanolamine kinase activity [goid 4305] [evidence IEA] CHKL; CHETK
7400253 ILMN_17249 ILMN_17249 12669916 NM_001951.2 NM_001951.2 E2F5 S 957 CTTCTGACGTGTTTCCTCTCTTAAGGCTTTCTCCTACCCCGGCAGATGAC "Homo sapiens E2F transcription factor 5, p130-binding (E2F5), mRNA." "regulation of transcription, DNA-dependent [goid 6355] [evidence IEA]; regulation of cell cycle [goid 74] [pmid 7892279] [evidence TAS]; transcription [goid 6350] [evidence IEA]; protein binding [goid 5515] [pmid 7760804] [evidence TAS]; transcription factor activity [goid 3700] [pmid 7892279] [evidence NAS]; transcription factor complex [goid 5667] [evidence IEA]; nucleus [goid 5634] [evidence IEA]" E2F-5
50136 ILMN_132251 ILMN_132251 15448569 Hs.580070 BI561255 S 682 CTGTTATCGGAGGGTCCGTGGCACTTCTCTTGCCTGGATCAAACGGTGAC "603256406F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:5298936 5, mRNA sequence"
6100431 ILMN_118745 ILMN_118745 5887203 Hs.566417 AW028447 S 103 TTAAAGAACCAGGAAATGTAGAAAATTAGTTGCCTGTCCATAGGGATCTT "wv89c11.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2541332 3, mRNA sequence"
2600689 ILMN_118938 ILMN_118938 2901930 Hs.566667 AA828831 S 190 TGGTTATCAGGGGCTTGCAGTGTGAGGGATGTGGAAATTAGGTCAAAAGG "od80c01.s1 NCI_CGAP_Ov2 Homo sapiens cDNA clone IMAGE:1374240, mRNA sequence"
3850164 ILMN_103363 ILMN_103363 33197153 Hs.537570 CF123192 S 171 CATTGTGCAAAGTCATGCTGCTTCGAATTATGCTGCGCGCTGGCACACAG "UI-HF-CH0.1-aue-b-02-0-UI.r1 NIH_MGC_211 Homo sapiens cDNA clone IMAGE:30573133 5, mRNA sequence"
460161 ILMN_2384 ILMN_2384 40807468 NM_005879.2 NM_005879.2 TRAIP S 1609 TCGGGACCAGCCTGAGGTGTAAGGGCAGACAAACAGGTGAGGGTGAGTGT "Homo sapiens TRAF interacting protein (TRAIP), mRNA." cell proliferation [goid 8283] [pmid 9104814] [evidence TAS]; induction of apoptosis [goid 6917] [pmid 9104814] [evidence TAS]; signal transduction [goid 7165] [pmid 9104814] [evidence TAS]; metal ion binding [goid 46872] [evidence IEA]; zinc ion binding [goid 8270] [evidence IEA]; protein binding [goid 5515] [evidence IEA] TRIP; RNF206
3520338 ILMN_21047 ILMN_21047 27437044 NM_172313.1 NM_172313.1 CSF3R A 2239 CCTTGGCACGCCACCCATCACCAAGCTCACAGTGCTGGAGGAGGATGAAA "Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R), transcript variant 4, mRNA." signal transduction [goid 7165] [pmid 1371413] [evidence NAS]; defense response [goid 6952] [pmid 7542747] [evidence TAS]; cell adhesion [goid 7155] [evidence IEA]; protein binding [goid 5515] [evidence IEA]; receptor activity [goid 4872] [pmid 7542747] [evidence TAS]; hematopoietin/interferon-class (D200-domain) cytokine receptor activity [goid 4896] [evidence IEA]; membrane [goid 16020] [evidence IEA]; integral to plasma membrane [goid 5887] [pmid 7542747] [evidence TAS] CD114; GCSFR

Total number of rows: 48701

Table truncated, full table size 16420 Kbytes.

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