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Series GSE135644 Query DataSets for GSE135644
Status Public on Oct 14, 2019
Title Expression data of EBV-positive and EBV-negative subclones of gastric adenocarcinoma cell line AGS
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Gastric cancer is one of the most common cancers worldwide. Epstein-Barr virus-associated gastric cancer accounts for approximately 10% of all gastric cancers. EBV expresses its own proteins and miRNAs (BART miRNAs) and regulates host gene expression. In this study, we examined the effect of EBV infection on host mRNA expression. Differential gene expression was analyzed between EBV-negative human gastric cancer cell line AGS and EBV-positive human gastric cancer cell line AGS-EBV.
 
Overall design Total RNA was prepared using RNAzol B reagent from five each independent cultures of AGS and AGS-EBV cells.
 
Contributor(s) Lee SK
Citation(s) 31597357, 34681596
Submission date Aug 09, 2019
Last update date Nov 03, 2021
Contact name Suk Kyeong Lee
E-mail(s) sukklee@catholic.ac.kr
Organization name Catholic University of korea
Street address 222, Banpo-daero
City Seoul
ZIP/Postal code 06591
Country South Korea
 
Platforms (1)
GPL6106 Sentrix Human-6 v2 Expression BeadChip
Samples (10)
GSM4025386 AGS set 1
GSM4025387 AGS set 2
GSM4025388 AGS set 3
Relations
BioProject PRJNA559542

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135644_Processed_data.xlsx 14.7 Mb (ftp)(http) XLSX
GSE135644_Raw_data.xlsx 12.2 Mb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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