 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Mar 11, 2010 |
| Title |
[Flavus_22683_AFLAVUSa520391F] NCSU Payne_Aspergillus Array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organisms |
Zea mays; Aspergillus flavus; Aspergillus oryzae |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
Standard Affymetrix protocols were followed and can be found at http://www.affymetrix.com/support/technical/manual/technical_manual.afx
|
| |
|
| |
|
| Contributor(s) |
Payne GA, Woloshuk CP, Keller NP, Yu J |
| Submission date |
Mar 25, 2009 |
| Last update date |
Oct 02, 2014 |
| Contact name |
David Ryan Georgianna |
| E-mail(s) |
drgeorgi@ncsu.edu
|
| Phone |
919-515-6995
|
| URL |
http://www.aspergillusflavus.org
|
| Organization name |
North Carolina State University
|
| Department |
Plant Pathology
|
| Lab |
Center for Integrated Fungal Research - Gary Payne
|
| Street address |
851 Main Campus Dr
|
| City |
Raleigh |
| State/province |
NC |
| ZIP/Postal code |
27695 |
| Country |
USA |
| |
|
| Samples (167)
|
GSM391668, GSM391669, GSM391670, GSM391671, GSM391672, GSM391673
GSM402062, GSM402063, GSM402064, GSM402065, GSM402066, GSM402067, GSM402068, GSM402069, GSM402070, GSM402071, GSM402072, GSM402073, GSM402074, GSM402075, GSM402076, GSM402077, GSM402078, GSM402079, GSM402080, GSM402081, GSM402082, GSM402083, GSM402084, GSM402085, GSM402086, GSM402087, GSM402088, GSM402089, GSM402090, GSM402091, GSM402092, GSM402093, GSM402094, GSM402095, GSM402096, GSM402097, GSM402098, GSM402099, GSM402100, GSM402101, GSM402102, GSM402103, GSM402104, GSM402105, GSM402106, GSM402107, GSM402108, GSM402109, GSM402110, GSM402111, GSM402112, GSM402113, GSM402114, GSM402115, GSM402116, GSM402117, GSM402118, GSM402119, GSM402120, GSM402121, GSM402122, GSM402123, GSM402124, GSM402125, GSM402126, GSM402127, GSM402128, GSM402129, GSM402130, GSM402131, GSM402132, GSM402133, GSM402134, GSM402135, GSM402136, GSM697518, GSM697519, GSM697520, GSM697521, GSM697522, GSM697523, GSM697524, GSM697525, GSM697526, GSM697527, GSM697528, GSM697529, GSM1385720, GSM1385721, GSM1385722, GSM1385723, GSM1385724, GSM1385725, GSM1385726, GSM1385727, GSM1385728, GSM1385729, GSM1385730, GSM1385731, GSM1385732, GSM1385733, GSM1385734, GSM1385735, GSM1385736, GSM1385737, GSM1517871, GSM1517872, GSM1517873, GSM1517874, GSM1517875, GSM1517876, GSM1517877, GSM1517878, GSM1517879, GSM1517880, GSM1517881, GSM1517882, GSM1517883, GSM1517884, GSM1517885, GSM1517886, GSM1517887, GSM1517888, GSM1517889, GSM1517890, GSM1517891, GSM1517892, GSM1517893, GSM1517894, GSM1517895, GSM1517896, GSM1517897, GSM1517898, GSM1517899, GSM1517900, GSM1517901, GSM1517902, GSM1517903, GSM1517904, GSM1517905, GSM1517906, GSM1517907, GSM1517908, GSM1517909, GSM1517910, GSM1517911, GSM1517912, GSM1517913, GSM1517914, GSM1517915, GSM1517916, GSM1517917, GSM1517918, GSM1517919, GSM1517920, GSM1517921, GSM1517922, GSM1517923, GSM1517924, GSM1517925, GSM1517926
|
| Series (5)
|
| GSE15435 |
Diverse expression patterns for secondary metabolism gene clusters from Aspergillus |
| GSE15650 |
Comparative Genome Hybridization Reveals Few Genetic Differences between Aspergillus flavus and A. oryzae |
| GSE28163 |
Genotypic and Phenotypic Versatility of Aspergillus flavus during Maize Exploitation |
| GSE57629 |
Transcriptional changes in Aspergillus flavus-infected maize kernels |
| GSE61981 |
Enhanced diversity and aflatoxigenicity in interspecific hybrids of Aspergillus flavus and Aspergillus parasiticus |
|
| Relations |
| Alternative to |
GPL13221 |
| Data table header descriptions |
| ID |
Affymetrix Probe Set ID (typically 11 probes per probeset) |
| CLONE_ID |
J. Craig Venter Institute Accession Number, searchable in Genbank |
| Description |
|
| GO terms |
|
| Interpro |
|
| SPOT_ID |
|
| Data table |
| ID |
CLONE_ID |
Description |
GO terms |
Interpro |
SPOT_ID |
| 1569.m00638_at |
AFLA_000010 |
conserved hypothetical protein |
|
|
|
| 1569.m00637_at |
AFLA_000020 |
penicillin-binding protein, putative |
GO:0046677 |
IPR001466 |
|
| 1569.m00636_at |
AFLA_000330 |
multiple ankyrin repeats single kh domain protein, putative |
|
|
|
| 1569.m00635_at |
AFLA_000340 |
short-chain dehydrogenase, putative |
|
|
|
| 1569.m00634_at |
AFLA_000350 |
NAD dependent epimerase/dehydratase, putative |
GO:0003854 GO:0006694 GO:0006808 GO:0016564 |
IPR002225, IPR008030 |
|
| 1569.m00633_at |
AFLA_000360 |
hypothetical protein |
|
|
|
| 1569.m00632_at |
AFLA_000370 |
hypothetical protein |
|
|
|
| 1569.m00631_at |
AFLA_000380 |
oxidoreductase, short-chain dehydrogenase/reductase family, putative |
GO:0008152 GO:0016491 |
IPR002198 |
|
| 1569.m00630_at |
AFLA_000390 |
conserved hypothetical protein |
|
|
|
| 1569.m00629_at |
AFLA_000500 |
conserved hypothetical protein |
|
|
|
| 1569.m00628_at |
AFLA_000510 |
conserved hypothetical protein |
|
|
|
| 1569.m00627_at |
AFLA_000520 |
conserved hypothetical protein |
|
|
|
| 1569.m00626_at |
AFLA_000530 |
conserved hypothetical protein |
|
|
|
| 1569.m00625_at |
AFLA_000540 |
amidase, putative |
|
|
|
| 1569.m00624_at |
AFLA_000550 |
benzoate 4-monooxygenase cytochrome P450, putative |
GO:0006118 |
IPR001128 |
|
| 1569.m00623_at |
AFLA_000560 |
conserved hypothetical protein |
|
|
|
| 1569.m00622_at |
AFLA_000570 |
conserved hypothetical protein |
|
|
|
| 1569.m00621_at |
AFLA_000590 |
conserved hypothetical protein |
|
|
|
| 1569.m00620_at |
AFLA_000600 |
amino acid transporter, putative |
GO:0005279 GO:0006865 GO:0016020 |
IPR002422 |
|
| 1569.m00619_at |
AFLA_000620 |
conserved hypothetical protein |
|
|
|
Total number of rows: 22683
Table truncated, full table size 1513 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL8345_AFLAVUSa520391F.cdf.gz |
7.0 Mb |
(ftp)(http) |
CDF |
|
|
|
|
 |
Less...
More...