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Status
Public on Nov 17, 2009
Title
NCode 0.24K multi-species miRNA microarray dual color version 2
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organisms
Caenorhabditis elegans ; Drosophila melanogaster ; Danio rerio ; Homo sapiens ; Mus musculus ; Rattus norvegicus Manufacturer
Invitrogen
Manufacture protocol
The microarray is contact-printed using microquill pins on Corning® Epoxide-Coated Glass Slides. The array specifications are: Total subarrays per slide: 3, Subarray layout: 8 blocks (4 rows × 2 columns), Block layout: 192 spots (12 rows × 16 columns), Block dimensions: 4 mm × 3 mm
Submission date
Jun 19, 2009
Last update date
Nov 17, 2009
Contact name
Thomas Werge
Phone
+45 4633 4968
Organization name
Psychiatric Center, Sct. Hans Hospital
Department
Institute of biological Psychiatry
Street address
Boserupvej 2
City
Roskilde
ZIP/Postal code
Dk-4000
Country
Denmark
Samples (40)
GSM419055 , GSM419056 , GSM419057 , GSM419058 , GSM419059 , GSM419060
GSM419061 ,
GSM419062 ,
GSM419063 ,
GSM419064 ,
GSM419065 ,
GSM419066 ,
GSM419067 ,
GSM419068 ,
GSM419069 ,
GSM419070 ,
GSM419071 ,
GSM419072 ,
GSM419073 ,
GSM419074 ,
GSM419075 ,
GSM419076 ,
GSM419077 ,
GSM419078 ,
GSM419079 ,
GSM419080 ,
GSM419081 ,
GSM419082 ,
GSM419083 ,
GSM419084 ,
GSM419085 ,
GSM419086 ,
GSM419087 ,
GSM419088 ,
GSM419089 ,
GSM419090 ,
GSM419091 ,
GSM419092 ,
GSM419093 ,
GSM419094 Series (1)
GSE16725 Regional brain expression maps for microRNAs in rats
Data table header descriptions ID miRNA_LIST microRNA name
miRBase miRBase accession number of miRNA
SEQUENCE sequence of probe
Data table ID miRNA_LIST miRBase SEQUENCE 1030
cel-let-7 , hsa-let-7a , rno-let-7a , dre-let-7a MIMAT0000001 , MIMAT0000062 , MIMAT0000774 , MIMAT0001759 AACTATACAACCTACTACCTCAAACTATACAACCTACTACCTCA
1231
dme-miR-9a , hsa-miR-9 , rno-miR-9 , dre-miR-9 MIMAT0000114 , MIMAT0000441 , MIMAT0000781 , MIMAT0001769 TCATACAGCTAGATAACCAAAGTCATACAGCTAGATAACCAAAG
1431
hsa-let-7b , mmu-let-7b , rno-let-7b , dre-let-7b MIMAT0000063 , MIMAT0000522 , MIMAT0000775 , MIMAT0001760 AACCACACAACCTACTACCTCAAACCACACAACCTACTACCTCA
1268
hsa-let-7c , mmu-let-7c , rno-let-7c , dre-let-7c MIMAT0000064 , MIMAT0000523 , MIMAT0000776 , MIMAT0001761 AACCATACAACCTACTACCTCAAACCATACAACCTACTACCTCA
1085
hsa-let-7d , mmu-let-7d , rno-let-7d MIMAT0000065 , MIMAT0000383 , MIMAT0000562 ACTATGCAACCTACTACCTCTACTATGCAACCTACTACCTCT
1421
hsa-let-7e , mmu-let-7e , rno-let-7e MIMAT0000066 , MIMAT0000524 , MIMAT0000777 ACTATACAACCTCCTACCTCAACTATACAACCTCCTACCTCA
1033
hsa-let-7f , rno-let-7f , dre-let-7f MIMAT0000067 , MIMAT0000778 , MIMAT0001764 AACTATACAATCTACTACCTCAAACTATACAATCTACTACCTCA
1064
hsa-miR-100 , mmu-miR-100 , rno-miR-100 , dre-miR-100 MIMAT0000098 , MIMAT0000655 , MIMAT0000822 , MIMAT0001813 CACAAGTTCGGATCTACGGGTCACAAGTTCGGATCTACGGGT
1297
hsa-miR-101 , mmu-miR-101a , rno-miR-101a , dre-miR-101a MIMAT0000099 , MIMAT0000133 , MIMAT0000823 , MIMAT0001814 CTTCAGTTATCACAGTACTGTACTTCAGTTATCACAGTACTGTA
1164
hsa-miR-103 , mmu-miR-103 , rno-miR-103 , dre-miR-103 MIMAT0000101 , MIMAT0000546 , MIMAT0000824 , MIMAT0001816 TCATAGCCCTGTACAATGCTGTCATAGCCCTGTACAATGCTG
1163
hsa-miR-107 , mmu-miR-107 , rno-miR-107 , dre-miR-107 MIMAT0000104 , MIMAT0000647 , MIMAT0000826 , MIMAT0001817 TGATAGCCCTGTACAATGCTGTGATAGCCCTGTACAATGCTG
1072
hsa-miR-10a , mmu-miR-10a , rno-miR-10a MIMAT0000253 , MIMAT0000648 , MIMAT0000782 CACAAATTCGGATCTACAGGGTCACAAATTCGGATCTACAGGGT
1213
hsa-miR-124a , rno-miR-124a MIMAT0000422 , MIMAT0000828 TGGCATTCACCGCGTGCCTTAATGGCATTCACCGCGTGCCTTAA
1377
hsa-miR-127 , rno-miR-127 MIMAT0000446 , MIMAT0000833 AGCCAAGCTCAGACGGATCCGAAGCCAAGCTCAGACGGATCCGA
1384
hsa-miR-139 , mmu-miR-139 , rno-miR-139 MIMAT0000250 , MIMAT0000656 , MIMAT0000845 AGACACGTGCACTGTAGAAGACACGTGCACTGTAGA
1106
hsa-miR-140 , rno-miR-140 MIMAT0000431 , MIMAT0000573 CTACCATAGGGTAAAACCACTCTACCATAGGGTAAAACCACT
1253
hsa-miR-142-3p , rno-miR-142-3p , dre-miR-142a-3p MIMAT0000434 , MIMAT0000848 , MIMAT0003160 TCCATAAAGTAGGAAACACTACTCCATAAAGTAGGAAACACTAC
1225
hsa-miR-153 , rno-miR-153 MIMAT0000439 , MIMAT0000855 TCACTTTTGTGACTATGCAATCACTTTTGTGACTATGCAA
1272
hsa-miR-16 , mmu-miR-16 , rno-miR-16 MIMAT0000069 , MIMAT0000527 , MIMAT0000785 CGCCAATATTTACGTGCTGCTACGCCAATATTTACGTGCTGCTA
1031
hsa-miR-17-5p , mmu-miR-17-5p , rno-miR-17 MIMAT0000070 , MIMAT0000649 , MIMAT0000786 ACTACCTGCACTGTAAGCACTTACTACCTGCACTGTAAGCACTT
236 27 Kbytes .Supplementary data files not provided
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