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Status
Public on Jun 01, 2010
Title
MRC Toxicology Unit, Mus musculus, oligo MEEBO microarrays
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Mus musculus
Manufacturer
MRC Toxicology Unit, Systems Toxicology Group
Manufacture protocol
1.Oligos are in 101 384 well plates (MEEBO set) (Cat OL -10-122). Each well contains 200 pmol of 70-mer oligo. Print split over 2 slides – A and B. 2. Resuspend oligos in 20ul printing buffer to 10uM. Printing buffer is 1.5M betaine, 3xSSC. 3. Seal plates with adhesive PCR film from Applied Biosystems (cat. AB-0558). 4. Shake plates on a multi plate shaker for about 15 minutes This resuspends the dried down oligo in the printing buffer. 5. Centrifuge plates at 3000rpm for 5 minutes. 6. Remove seal immediately prior to use. Place one plate at a time in appropriate location of plate holder on arrayer. Screw to keep in position. Attach 32 pin head to standford design arrayer and start print run. After all 384 samples have been printed software will request next plate be placed in position. Remove previous plate, reseal and replace with next plate.
Submission date
Aug 26, 2009
Last update date
Jan 18, 2013
Contact name
Amy Pointon
Organization name
MRC Toxicology Unit
Department
Systems Toxicology Group
Street address
Lancaster Road
City
Leicester
ZIP/Postal code
LE1 9NH
Country
United Kingdom
Samples (149)
GSM444703 , GSM444704 , GSM444705 , GSM444706 , GSM444707 , GSM444708
GSM444709 ,
GSM444710 ,
GSM444711 ,
GSM444712 ,
GSM444713 ,
GSM444714 ,
GSM444715 ,
GSM444716 ,
GSM444717 ,
GSM444718 ,
GSM444719 ,
GSM444720 ,
GSM444721 ,
GSM444722 ,
GSM444723 ,
GSM444724 ,
GSM444725 ,
GSM444726 ,
GSM444727 ,
GSM444728 ,
GSM444729 ,
GSM444730 ,
GSM444731 ,
GSM444732 ,
GSM444733 ,
GSM444734 ,
GSM444735 ,
GSM444736 ,
GSM444756 ,
GSM444757 ,
GSM444758 ,
GSM444759 ,
GSM444760 ,
GSM444761 ,
GSM444762 ,
GSM444763 ,
GSM444764 ,
GSM444765 ,
GSM444766 ,
GSM444767 ,
GSM444768 ,
GSM444769 ,
GSM444770 ,
GSM444771 ,
GSM444772 ,
GSM444773 ,
GSM444774 ,
GSM444775 ,
GSM444776 ,
GSM444799 ,
GSM444800 ,
GSM444801 ,
GSM444802 ,
GSM444803 ,
GSM444804 ,
GSM444805 ,
GSM444806 ,
GSM444807 ,
GSM444808 ,
GSM444809 ,
GSM444810 ,
GSM444811 ,
GSM444812 ,
GSM444814 ,
GSM444815 ,
GSM444816 ,
GSM444817 ,
GSM444818 ,
GSM444819 ,
GSM444820 ,
GSM444821 ,
GSM444822 ,
GSM444825 ,
GSM444826 ,
GSM444827 ,
GSM444828 ,
GSM444829 ,
GSM444830 ,
GSM444831 ,
GSM444832 ,
GSM447504 ,
GSM447506 ,
GSM447507 ,
GSM447508 ,
GSM447509 ,
GSM447510 ,
GSM447511 ,
GSM447512 ,
GSM447513 ,
GSM447514 ,
GSM447515 ,
GSM447516 ,
GSM447517 ,
GSM447518 ,
GSM447519 ,
GSM447520 ,
GSM447521 ,
GSM447522 ,
GSM447523 ,
GSM447524 ,
GSM447525 ,
GSM447526 ,
GSM447527 ,
GSM447528 ,
GSM447529 ,
GSM447530 ,
GSM447531 ,
GSM447532 ,
GSM447533 ,
GSM447534 ,
GSM447535 ,
GSM447536 ,
GSM447537 ,
GSM447538 ,
GSM447539 ,
GSM447540 ,
GSM447541 ,
GSM447542 ,
GSM447543 ,
GSM447544 ,
GSM447545 ,
GSM447546 ,
GSM447547 ,
GSM447548 ,
GSM447549 ,
GSM447550 ,
GSM447551 ,
GSM447552 ,
GSM447553 ,
GSM447554 ,
GSM447555 ,
GSM447556 ,
GSM447557 ,
GSM4074714 ,
GSM4074715 ,
GSM4074716 ,
GSM4074717 ,
GSM4074718 ,
GSM4074719 ,
GSM4074720 ,
GSM4074721 ,
GSM4074722 ,
GSM4074723
Series (6)
GSE17823
Mouse cardiac tissue, polysomes and monosomes: Vehicle treated control vs. 15mg/kg doxorubicin
GSE17826
Mouse cardiac tissue: Vehicle treated control vs. 15mg/kg doxorubicin
GSE17830
Mouse cardiac tissue, polysomes and monosomes: Vehicle treated control vs. 25mg/kg DMNQ
GSE17915
Mouse cardiac tissue: Vehicle treated control vs. 25mg/kg DMNQ
GSE18459
Mouse cardiac tissues treated with doxorubicin and DMNQ
GSE137292
Gene expression profiles in the PhIP/DSS-induced mouse colon tumors and the adjacent normal epithelium controls
Data table header descriptions
ID
Oligo ID from probe set
GB_LIST
NCBI Accession number
ORF
Gene symbols
Array Name
Oligo probe name
SPOT_ID
spot identifier
Total number of rows: 38468 Table truncated, full table size 1946 Kbytes .
Supplementary data files not provided