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Platform GPL9359 Query DataSets for GPL9359
Status Public on Jan 01, 2010
Title WCFS Lactobacillus plantarum 11K 60-mer array, Version 2
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Lactiplantibacillus plantarum WCFS1
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
 
Submission date Oct 06, 2009
Last update date Jan 01, 2010
Contact name Michiel Wels
E-mail(s) michiel.wels@nizo.com
Organization name NIZO food research
Street address Kernhemseweg 2
City Ede
ZIP/Postal code 6718 ZB
Country Netherlands
 
Samples (12) GSM459362, GSM459363, GSM459364, GSM459365, GSM459366, GSM459367 
Series (2)
GSE18432 Aerobic cultivation vs Respiratory conditions
GSE20515 WT vs KO of lp_2991 comparison

Data table header descriptions
ID Unique spot identifier
ROW Row within array
COLUMN Column within array
OLIGO_ID Oligonucleotide identifier
SEQUENCE Sequence of oligonucleotide probe
ORF Locus tag from accession number AL935254
SPOT_ID Identifier for non ORF spots

Data table
ID ROW COLUMN OLIGO_ID SEQUENCE ORF SPOT_ID
1 1 1 BrightCorner BrightCorner
2 1 2 BrightCorner BrightCorner
3 1 3 (-)3xSLv1 NegativeControl
4 1 4 AG1lp_3247#3 TCACGTCGTTTGTGAGAATTGTGGTAAAATTACTGACGTTTTCGAACCCGACCTCCGCAG lp_3247
5 1 5 AG1lp_0942#1 GATGTCGCAACGATCTGGCCAACCTGGAATCAACTCAAAAGAATATGCCCGCTTTAAGTT lp_0942
6 1 6 AG1lp_1297#2 AAAAATATATTGGTCCCGGCACAGGCTTTACGGTTGCCATCCTATATTGGTTGACTTGGA lp_1297
7 1 7 AG1lp_1738#1 GACCGTTATCAAACAGTTCGCTGGGATTTCACGTACGAAAGCCTTGAAAAAGGTCTGGTC lp_1738
8 1 8 AG1lp_0009#1 TGATAACGGTGCGCAAGTAATTGATTCAAAAGACTGGTCAAAGCGTCGTTTCGCATACGA lp_0009
9 1 9 AG1lp_1070#2 AAGAAGATCGCTGGGACTAACCCCAAGACTTACATGCCTAAGTTAAACAAGACGCTGACG lp_1070
10 1 10 AG1lp_1823#1 AAGCAACTTGGAGATTACTCGCATTATTGATTGGACAACCGATCGTCATTTACACCGCGC lp_1823
11 1 11 AG1lp_1357#2 CGGATTACAATTAAAGTCGTGGGGCTAAAAGCCAAAGTACTAACAGTACCAACCGGGACA lp_1357
12 1 12 AG1lp_0748#1 TCGTGGGGCTGTTCGGATACTTGTTCTTTGTAGTGCAGTTCAAGTTAGGCTTCTCGATTC lp_0748
13 1 13 AG1lp_1040#1 GTGCTGACATCGACTATTCATGGGTCGAAGCACGGACGACTTACGGTAAATTAGGTGTTA lp_1040
14 1 14 AG1lp_2666#1 CGAGTTATCCACTGGATAAAATTCGTCAGGGAATCGACCAAGTGACTGCGACTGGCTATC lp_2666
15 1 15 AG1lp_2404#3 ACTTCACCACAGACGGTTAAAATTGGTGATACCACCACTAGTTTTACGTTAATTTGTGGC lp_2404
16 1 16 AG3lp_2965#2 ATGAAGCTAATTTACGGGGAGCGGTCGTTGACTTTTGTCAGACGTATCTGGACATTCAAA lp_2965
17 1 17 AG1lp_1027#2 GGTTATGCAACCACATTACGTTCAGCTACTCAAGGTCGTGGGACTTTCACAATGACCTTT lp_1027
18 1 18 AG1lp_2431#3 AAAGAGTTAGATGACGTTGGACTATCTCGGTGGTTTGCAAATGTAGTTCCTGAAACGGTA lp_2431
19 1 19 AG3lp_2415#2 GTCAGCATGATAAGCGAACGGCGTTCTACATTATTCGTAATGAGGTGATACTACATGGCG lp_2415
20 1 20 (+)Pro25G-02 Pro25G

Total number of rows: 10807

Table truncated, full table size 959 Kbytes.




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Supplementary data files not provided

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