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Series GSE104082 Query DataSets for GSE104082
Status Public on Jan 13, 2020
Title Scc1 ChIP-Seq in a strain where the centromere on chromosome III has been moved to an ectopic site
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome binding/occupancy profiling of the cohesin subunit Scc1 by high throughput sequencing

 
Overall design Purpose: Can the centromere set up new pericentromere borders on a chromosomal arm site?

 
Contributor(s) Alver B, Marston AL
Citation(s) 32494069
Submission date Sep 20, 2017
Last update date Jul 25, 2021
Contact name Daniel Robertson
E-mail(s) daniel.robertson@ed.ac.uk
Organization name University of Edinburgh
Department Discovery Research Platform for Hidden Cell Biology
Lab Bioinformatics Core
Street address 2.28 Michael Swann Building, Kings Buildings, Mayfield Road
City Edinburgh
State/province Midlothian
ZIP/Postal code EH9 3JR
Country United Kingdom
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (4)
GSM2789279 AM16144_Scc1-6HA_CEN3del_tension_input
GSM2789281 AM16144_Scc1-6HA_CEN3del_no_tension_input
GSM2789283 AM16144_Scc1-6HA_CEN3del_tension_IP
This SubSeries is part of SuperSeries:
GSE104135 Convergent genes shape budding yeast pericentromeres
Relations
BioProject PRJNA408171
SRA SRP118388

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104082_RAW.tar 314.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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