|
| Status |
Public on Nov 09, 2018 |
| Title |
Profiling of N6-methyladenosine (m6A) in Arabidopsis wild type and ABI3:MTA |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In order to gain insight into abundance of transcripts in the presence and absence of m6A, we performed an mRNA sequencing expirement in both mta and Col-0 plants.
|
| |
|
| Overall design |
2 replicates per genotype of miCLIP-seq in Arabidopsis thaliana ecotype Col-0 wild-type (WT) and ABI3:MTA (mta).
|
| |
|
| Contributor(s) |
Anderson SJ, Yu X, Gosai SJ, Anderson ZD, Fray RG, Gregory BD |
| Citation(s) |
30380407, 32817553 |
| |
| Submission date |
Jan 04, 2018 |
| Last update date |
Sep 21, 2020 |
| Contact name |
Stephen James Anderson |
| E-mail(s) |
sandersonrbt@gmail.com
|
| Organization name |
University of Pennsylvania
|
| Department |
Biology
|
| Lab |
Brian Gregory
|
| Street address |
433 South University Avenue
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (8)
|
|
| This SubSeries is part of SuperSeries: |
| GSE108852 |
N6-methyladenosine-mediated structural changes are associated with transcript cleavage and stability in Arabidopsis |
|
| Relations |
| BioProject |
PRJNA428515 |
| SRA |
SRP128056 |
Less...
More...