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Series GSE109122 Query DataSets for GSE109122
Status Public on Jul 27, 2018
Title Transcripts from downstream alternative transcription start sites evade uORF-mediated inhibition of gene expression during blue light exposure in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Other
Summary uORF-mediated translation reguration
 
Overall design Ribosome profiling
 
Contributor(s) Kurihara Y, Makita Y, Kwashima M, Fujita T, Iwasaki S, Matsui M
Citation(s) 29915080
Submission date Jan 12, 2018
Last update date Oct 03, 2018
Contact name tomoya fujita
E-mail(s) tomoya.fujita.at.riken@gmail.com
Organization name RIKEN
Department Cluster for Pioneering Research
Lab RNA Systems Biochemistry Laboratory
Street address 2-1, Hirosawa
City Wako
State/province Saitama
ZIP/Postal code 3510198
Country Japan
 
Platforms (1)
GPL21785 Illumina HiSeq 4000 (Arabidopsis thaliana)
Samples (8)
GSM2932477 ribo_blue_rep1
GSM2932478 ribo_blue_rep2
GSM2932479 ribo_dark_rep1
Relations
BioProject PRJNA429734
SRA SRP128983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109122_RAW.tar 1.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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