NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE10968 Query DataSets for GSE10968
Status Public on Apr 21, 2008
Title Highly integrated epigenome maps in Arabidopsis - transcriptome sequencing
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Part of a set of highly integrated epigenome maps for Arabidopsis thaliana.
Keywords: Illumina high-throughput transcriptome sequencing
 
Overall design Transcriptome sequencing of wildtype Arabidopsis plants (Columbia-0), and met1, drm1 drm2 cmt3, and ros1 dml2 dml3 null mutants using the Illumina Genetic Analyzer.
 
Contributor(s) Lister R, O'Malley RC, Tonti-Filippini J, Gregory BD, Berry CC, Millar AH, Ecker JR
Citation(s) 18423832
Submission date Mar 27, 2008
Last update date May 15, 2019
Contact name Joseph R Ecker
E-mail(s) ecker@salk.edu
Phone 8584534100
Organization name HHMI-Salk-Institute
Department Genomic Analysis Laboratory
Lab Ecker lab
Street address 10010 North Torrey Pines Road
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL9062 Illumina Genome Analyzer (Arabidopsis thaliana)
Samples (4)
GSM277612 Col-0_RNA-seq
GSM277613 met1_RNA-seq
GSM277614 ddc_RNA-seq
This SubSeries is part of SuperSeries:
GSE10877 Highly integrated single base resolution maps of the epigenome in Arabidopsis
Relations
SRA SRP000568
BioProject PRJNA108797

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10968_RAW.tar 578.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap