|
| Status |
Public on Apr 30, 2008 |
| Title |
Deep sequencing of Drosophila melanogaster small RNAs |
| Organisms |
Drosophila melanogaster; Flock House virus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
High throughput seqeuncing of small RNAs (PAGE isolated from total RNA or Argonaute immunoprecipitates) from Drosophila melanogaster using the Illumina platform. Adapter ligation requires 5' monophosphate and 3' OH.
Full analysis of all libraries in this set is published (Czech B. et al. 2008), leading to the description of endogenous siRNAs in flies.
Keywords: Solexa sequences
|
| |
|
| Overall design |
7 libraries; each seqeunced once
|
| |
|
| Citation(s) |
18463631 |
| |
| Submission date |
Apr 07, 2008 |
| Last update date |
Jun 11, 2013 |
| Contact name |
Julius Brennecke |
| E-mail(s) |
brenneck@cshl.edu
|
| Organization name |
Cold Spring Harbor Labs
|
| Lab |
Greg Hannon
|
| Street address |
1 Bungtown Road
|
| City |
Cold Spring Harbor |
| State/province |
NY |
| ZIP/Postal code |
11724 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL9058 |
Illumina Genome Analyzer (Drosophila melanogaster) |
| GPL9402 |
Illumina Genome Analyzer (Flock house virus) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA107077 |
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