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Series GSE112380 Query DataSets for GSE112380
Status Public on Jan 29, 2019
Title Regulation of lineage segregation, pluripotency and X chromosome inactivation in the pig revealed by scRNA-Seq
Organism Sus scrofa
Experiment type Expression profiling by high throughput sequencing
Summary we report single cell expression profiles of embryonic cells (from day 5 to 11) of pig embryo development.
 
Overall design single cell transcriptomes were generated from 220 cells obtained from 28 embryos (15 male and 13 female)
 
Contributor(s) Alberio R, Sang F
Citation(s) 30700715
Submission date Mar 27, 2018
Last update date Feb 15, 2019
Contact name Fei Sang
E-mail(s) mbzfs1@exmail.nottingham.ac.uk
Organization name University of Nottingham
Department School of Life Sciences
Lab DeepSeq
Street address QMC
City Nottingham
ZIP/Postal code NG72UH
Country United Kingdom
 
Platforms (1)
GPL19176 Illumina HiSeq 2500 (Sus scrofa)
Samples (220)
GSM3068996 SLX_13258.i710_i517
GSM3068997 SLX_13259.i712_i505
GSM3068998 SLX_13255.i704_i507
Relations
BioProject PRJNA445862
SRA SRP136553

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112380_Pig_RawCounts.txt.gz 2.4 Mb (ftp)(http) TXT
GSE112380_Pig_TPMs.txt.gz 11.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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