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| Status |
Public on Dec 22, 2008 |
| Title |
Transcriptional profiling of Zea mays 10 DAP(days after pollination) kernels : water stress vs well-watered control |
| Organism |
Zea mays |
| Experiment type |
Expression profiling by array
|
| Summary |
A customized targeted oligoarray was used to monitor the expression levels of 1000 genes, representative of the immature kernel transcriptome.
Using this oligoarray we compared transcripts from 10 DAP kernels of two susceptible and two drought tolerant genotypes.
These four genotypes were extracted from our RIL population (B73xH99) and grown under water stress and well watered field conditions.
Keywords: Stress response
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| Overall design |
Two-condition experiment: water stress field condition vs. well watered field condition. Transcriptional profiling of 10 DAP kernel (two susceptible and two drought tolerant genotypes) in the first condition vs 10 DAP kernel (two susceptible and two drought tolerant genotypes) in the second condition. Hybridization replicates: 4 in dye swap mode. Two probes per gene per array.
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| Contributor(s) |
Marino R, Ponnaiah M, Krajewski P, Frova C, Gianfranceschi L, Pè EM, Sari-Gorla M |
| Citation(s) |
19018570 |
| |
| Submission date |
May 27, 2008 |
| Last update date |
Mar 19, 2012 |
| Contact name |
Rosanna Marino |
| E-mail(s) |
rosanna.marino@unimi.it
|
| Phone |
00390250315042
|
| Fax |
00390250315044
|
| URL |
http://users.unimi.it/camelot/
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| Organization name |
Universita' degli studi di Milano
|
| Department |
Department of biomolecular sciences and biothecnology
|
| Lab |
Plant molecular genetics
|
| Street address |
Via celoria 26
|
| City |
Milano |
| State/province |
Milano |
| ZIP/Postal code |
20133 |
| Country |
Italy |
| |
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| Platforms (1) |
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| Samples (16)
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| GSM291230 |
kernel_tolerant1_water stress_vs_well watered_rep1 |
| GSM291231 |
kernel_tolerant1_water stress_vs_well watered_rep2 |
| GSM291232 |
kernel_tolerant1_water stress_vs_well watered_rep3 |
| GSM291233 |
kernel_tolerant1_water stress_vs_well watered_rep4 |
| GSM291234 |
kernel_tolerant2_water stress_vs_well watered_rep1 |
| GSM291235 |
kernel_tolerant2_water stress_vs_well watered_rep2 |
| GSM291236 |
kernel_tolerant2_water stress_vs_well watered_rep3 |
| GSM291237 |
kernel_tolerant2_water stress_vs_well watered_rep4 |
| GSM291238 |
kernel_susceptible1_water stress_vs_well watered_rep1 |
| GSM291239 |
kernel_susceptible1_water stress_vs_well watered_rep2 |
| GSM291240 |
kernel_susceptible1_water stress_vs_well watered_rep3 |
| GSM291241 |
kernel_susceptible1_water stress_vs_well watered_rep4 |
| GSM291242 |
kernel_susceptible2_water stress_vs_well watered_rep1 |
| GSM291243 |
kernel_susceptible2_water stress_vs_well watered_rep2 |
| GSM291244 |
kernel_susceptible2_water stress_vs_well watered_rep3 |
| GSM291245 |
kernel_susceptible2_water stress_vs_well watered_rep4 |
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| Relations |
| BioProject |
PRJNA106187 |
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