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| Status |
Public on Jan 13, 2009 |
| Title |
Transcriptome profiling of Pacific oyster Crassostrea gigas families that differ in tolerance of heat shock |
| Platform organisms |
Crassostrea virginica; Magallana gigas |
| Sample organism |
Magallana gigas |
| Experiment type |
Expression profiling by array
|
| Summary |
ESTs in which transcription levels in oyster gill differed among sampling times after heat shock and between families with high or low survival of heat shock were identified through expression profiling of 1,675 spot pairs
Keywords: comparison of families characterized by low or high survival after heat shock
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| Overall design |
Oyster families were characterized by survival after heat shock, exposed to a sub-lethal heat shock, and gill was collected before and at 1, 3, 6, and 24 h afterwards. Differences among sampling times and between family types were assessed using a 2-way analysis of variance. In total, 1,675 ESTs were included in the analysis.
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| Contributor(s) |
Lang RP, Bayne CJ, Camara MD, Jenny MJ, Cunningham C, Langdon CJ |
| Citation(s) |
19205802 |
| |
| Submission date |
Jul 10, 2008 |
| Last update date |
Mar 20, 2012 |
| Contact name |
Marine Genomics |
| E-mail(s) |
info@marinegenomics.org
|
| Phone |
8437628869
|
| URL |
http://www.marinegenomics.org
|
| Organization name |
Medical University South Carolina
|
| Street address |
331 Ft. Johnson Road
|
| City |
Charleston |
| State/province |
SC |
| ZIP/Postal code |
29412 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL3994 |
Hollings Marine Laboratory Crassostrea cDNA Array |
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| Samples (60)
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| Relations |
| BioProject |
PRJNA113321 |
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