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Series GSE122988 Query DataSets for GSE122988
Status Public on Jan 21, 2019
Title Microarray analysis of gene expression of Atlantic cod from different Baltic Sea regions
Organism Gadus morhua
Experiment type Expression profiling by array
Summary The Atlantic cod (Gadus morhua L.) is one of the most important species in the Baltic Sea with high ecological and economical value. To explore the differences in adaptation to salinity between Baltic cod from different regions, western (Kiel Bight) and eastern (Gdańsk Bay) samples were analyzed through oligonucleotide microarray.
 
Overall design Atlantic cod samples (n=8) were collected from two subdivisions: the Schleifjord, Kiel Bight (KIEL-18PSU) - SD22 and Gdańsk Bay (GDA - 8PSU) - SD 26. Gene expression changes in gills were assessed with 44 k oligonucleotide microarray
Web link https://doi.org/10.1016/j.margen.2019.04.006
 
Contributor(s) Malachowicz M, Wenne R
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 27, 2018
Last update date Dec 20, 2021
Contact name Magdalena Malachowicz
E-mail(s) mwarzecha@iopan.gda.pl
Organization name Institute of Oceanology Polish Academy of Sciences
Street address Powstańców Warszawy
City Sopot
ZIP/Postal code 81-712
Country Poland
 
Platforms (1)
GPL18779 Agilent_033054 Genome-wide Atlantic cod microarray, second version_ACIQ1
Samples (8)
GSM3489939 GDA_gill_1
GSM3489940 GDA_gill_2
GSM3489941 GDA_gill_3
Relations
BioProject PRJNA507157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122988_RAW.tar 97.8 Mb (http)(custom) TAR (of TXT)
GSE122988_normalized_log2ratios.txt.gz 1.8 Mb (ftp)(http) TXT
Processed data are available on Series record

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