|
| Status |
Public on Dec 06, 2018 |
| Title |
SNP genotyping of various breeds |
| Organism |
Canis lupus familiaris |
| Experiment type |
SNP genotyping by SNP array
Genome variation profiling by SNP array
|
| Summary |
SNP of new dog breeds improves the validity of population clustering and breed based phylogenies.
|
| |
|
| Overall design |
DNA was collected from pedigreed dogs of multiple breeds. SNPs were genotyed using the Illumina CanineHD SNP chip. These SNPs were analyzed using distance measures and haplotype sharing to build a cladogram of breeds and show across-breed hybridization.
|
| |
|
| Contributor(s) |
Parker HG, Ostrander EA |
| Citation(s) |
30940804 |
| |
| Submission date |
Dec 05, 2018 |
| Last update date |
Oct 02, 2024 |
| Contact name |
Heidi G Parker |
| E-mail(s) |
hgparker@mail.nih.gov
|
| Organization name |
NHGRI
|
| Department |
CGB
|
| Lab |
CGS
|
| Street address |
50 South Dr. Rm 5347
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20874 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (95)
|
|
| Relations |
| Reanalyzed by |
GSE278600 |
| BioProject |
PRJNA508513 |
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