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Series GSE125520 Query DataSets for GSE125520
Status Public on Apr 15, 2019
Title Zika virus infection induces RNAi-mediated antiviral immunity in human neural progenitors and brain organoids
Organisms Aedes aegypti; Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The re-emergence of Zika virus (ZIKV) in the Western Hemisphere has resulted in global public health crisis since 2015. ZIKV
preferentially infects and targets human neural progenitor cells (hNPCs) and causes fetal microcephaly upon maternal infection.
hNPCs not only play critical roles during fetal brain development, but also persist in adult brain throughout life. Yet the mechanism
of innate antiviral immunity in hNPCs remains largely unknown. Here, we show that ZIKV infection triggers the abundant
production of virus-derived small interfering RNAs in hNPCs, but not in the more differentiated progenies or somatic cells. Ablation
of key RNAi machinery components significantly enhances ZIKV replication in hNPCs. Furthermore, enoxacin, a broad-spectrum
antibiotic that is known as an RNAi enhancer, exerts potent anti-ZIKV activity in hNPCs and other RNAi-competent cells. Strikingly,
enoxacin treatment completely prevents ZIKV infection and circumvents ZIKV-induced microcephalic phenotypes in brain organoid
models that recapitulate human fetal brain development. Our findings highlight the physiological importance of RNAi-mediated
antiviral immunity during the early stage of human brain development, uncovering a novel strategy to combat human congenital
viral infections through enhancing RNAi.
 
Overall design Small RNA profile of virus-infected cells
 
Contributor(s) Xu Y, Qiu Y, Zhang B, Chen G, Chen Q, Wang M, Mo F, Xu J, Wu J, Zhang R, Cheng M, Zhang N, Lyu B, Zhu W, Wu M, Ye Q, Zhang D, Man J, Li X, Cui J, Xu Z, Hu B, Zhou X, Qin C
Citation(s) 30814679
Submission date Jan 23, 2019
Last update date Jul 15, 2019
Contact name xi zhou
E-mail(s) zhouxi@wh.iov.cn
Organization name Wuhan University
Department State Key Laboratory of Virology, College of Life Sciences
Street address Luojia Hill
City Wuhan
State/province Hubei
ZIP/Postal code 430072
Country China
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL21020 Illumina HiSeq 2000 (Aedes aegypti)
Samples (5)
GSM3576325 Zikv-Aag2 (small RNA)
GSM3576326 Zikv-hNeurn (small RNA)
GSM3576327 Zikv-hNPC-1 (small RNA)
Relations
BioProject PRJNA516662
SRA SRP181655

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125520_RAW.tar 2.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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