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Series GSE125660 Query DataSets for GSE125660
Status Public on Jun 27, 2019
Title Study of MeCP2 in LUHMES-derived neurons
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31289233, 32064528
Submission date Jan 25, 2019
Last update date Apr 20, 2020
Contact name Shaun Michael Webb
E-mail(s) shaun.webb@ed.ac.uk
Organization name University of Edinburgh
Department Wellcome Trust Centre for Cell Biology
Lab Bioinformatics Core Facility
Street address 2.21 Swann Building, Kings Buildings
City Edinburgh
ZIP/Postal code EH9 3JR
Country United Kingdom
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (136)
GSM3579696 Control ATAC-seq 1
GSM3579697 Control ATAC-seq 2
GSM3579698 Control ATAC-seq 3
This SuperSeries is composed of the following SubSeries:
GSE125658 Study of MeCP2 binding and accessibity of chromatin in absence and presence of MeCP2 using ATAC-seq
GSE125659 Study of MeCP2 occupancy and biniding localization in the genome
GSE126639 Study of DNA methylation pattern in single basepair resolution in the human dopaminergic neurons
Relations
BioProject PRJNA517116

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125660_RAW.tar 119.6 Gb (http)(custom) TAR (of BIGWIG, BW, TXT)
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