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| Status |
Public on Aug 01, 2019 |
| Title |
Left atrial tissue of rats exposed to rapid atrial pacing |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Sustained atrial tachycardia leads to multiple molecular and cellular effects collectively defined as atrial tachycardia remodeling (ATR). ATR is thought to play a major role in the self-perpetuating nature of atrial fibrillation (AF) and has been a subject of intense research in large mammalian models of AF. Recently, rodents are increasingly used to gain insight on the pathophysiology AF. However, little is known regarding the effects of rapid pacing on the atria of rats and mice mainly due to technical challenges in electrophysiological studies of unanesthetized rodents. Using an implantable device for electrophysiological studies in unanesthetized rodents we examine, on a daily basis, the effects of continuous rapid atrial pacing (RAP) for at least 4 consecutive days on the developed AF substrate of Sprague-Dawley rats and C57BL6 mice. AF induction protocol consisted 10 aggressive bursts (20 seconds, double diastolic threshold, 10 ms cycle length [CL]). This protocol failed to induce AF at baseline in both species, but repeatedly induced AF episodes in rats following 2 days of sustained RAP. Microarray study of left atrial tissue from rats exposed for 2 days to RAP (70 ms CL) vs control pacing (140 ms CL) identified 304 differentially expressed genes (155 upregulated and 149 downregulated). Real-time qt-PCR confirmed the validity of the microarray. Enrichment analysis and comparison with a dataset of atrial tissue from AF patients revealed indications of increased carbohydrate metabolism, and changes in pathways that are thought to have critical role in human AF including TGF-beta and IL-6 signaling. Among 19 commonly affected genes in comparison with human AF, downregulation of FOXP1 and upregulation of the KCNK2 gene encoding the Kir2.1 potassium channel were conspicuous finding suggesting NFAT activation. Further results in line with NFAT activation included reduced expression of MIR-26, MIR-101, which were linked to upregulation of the KCNK2 in human AF. Our results demonstrate electrophysiological evidence for AF promoting effects of RAP in rats and some important molecular similarities between the effects of RAP in large and small mammalian models.
The effects of atrial tachypacing are well documented in large mammals but very little is know regarding the effects of tacypacing on the rodent atria.
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| Overall design |
Three pairs of adult male rats were subjected to either atrial tachypacing (70 ms Cycle length) or control pacing (140 ms Cycle length) for 2 days. Thereafter, left atrial tissue was extracted for the microarray analysis.
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| Contributor(s) |
Mulla W, Etzion Y |
| Citation(s) |
31616316 |
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| Submission date |
Feb 18, 2019 |
| Last update date |
Oct 21, 2019 |
| Contact name |
Yoram Etzion |
| E-mail(s) |
tzion@bgu.ac.il
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| Phone |
972-86479987
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| Organization name |
Ben-Gurion University, Israel
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| Department |
Physiology and Cell Biology
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| Lab |
Cardiac Arrhythmia Research Lab
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| Street address |
1st Ben-Gurion Street
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| City |
Beer-Sheva |
| State/province |
Please Select |
| ZIP/Postal code |
8410501 |
| Country |
Israel |
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| Platforms (1) |
| GPL6247 |
[RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA523021 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE126711_RAW.tar |
23.9 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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