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Series GSE128427 Query DataSets for GSE128427
Status Public on Sep 02, 2020
Title RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Our study suggested that DMBQ induces several transcripts, which are regulated by CARD1
Overall design Transcript profiles of 7-day old seedlings WT-expressing aequorin and card1-2 were generated by sequencing, in triplicate, using Illumina NextSeq500
Contributor(s) Laohavisit A, Shirasu K
Citation(s) 32879491
Submission date Mar 18, 2019
Last update date Dec 10, 2020
Contact name Anuphon Laohavisit
Organization name RIKEN
Street address 1-7-22 Suehiro-cho
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (48)
GSM3674305 WT_00.00_M_1
GSM3674306 WT_00.00_M_2
GSM3674307 WT_00.00_M_3
This SubSeries is part of SuperSeries:
GSE128510 RNA-seq of Arabidopsis wild-type (WT)-expressing aequorin and card1 mutants (WT-expressing aequorin background) in response to DMBQ.
BioProject PRJNA527966
SRA SRP188810

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128427_RNAseq_expt2.csv.gz 1.6 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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