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GEO accession:
Series GSE129427
Query DataSets for GSE129427
Status
Public on Jun 12, 2019
Title
Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31299961
Submission date
Apr 05, 2019
Last update date
Feb 19, 2020
Contact name
Eddie Rodríguez-Carballo
E-mail(s)
edgardo.rodriguez@unige.ch
Organization name
Université de Genève
Department
Department of Genetics and Evolution
Street address
4, Boulevard d'Yvoy
City
Geneva
ZIP/Postal code
1205
Country
Switzerland
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (30)
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More...
GSM3712724
DFL_E12_i6a_Wt_RNA-seq
GSM3712725
PFL_E12_i6a_Wt_RNA-seq
GSM3712726
DFL_E12_i6a_invattp-itga6_RNA-seq
GSM3712727
PFL_E12_i6a_invattp-itga6_RNA-seq
GSM3712728
DFL_E12_aR5_Wt_RNA-seq
GSM3712729
PFL_E12_aR5_Wt_RNA-seq
GSM3712730
DFL_E12_aR5_delattP-Rel5_RNA-seq
GSM3712731
PFL_E12_aR5_delattP-Rel5_RNA-seq
GSM3712732
E12_DFL_Wt_H3K27me3_ChIP-seq
GSM3712733
E12_PFL_Wt_H3K27me3_ChIP-seq
GSM3712734
E12_DFL_delattP-Rel5_H3K27me3_ChIP-seq
GSM3712735
E12_PFL_delattP-Rel5_H3K27me3_ChIP-seq
GSM3712736
E12_DFL_invattP-Itga6_H3K27me3_ChIP-seq
GSM3712737
E12_PFL_invattP-Itga6_H3K27me3_ChIP-seq
GSM3712738
E12_DFL_invNsi-Itga6_H3K27me3_ChIP-seq
GSM3712739
E12_PFL_invNsi-Itga6_H3K27me3_ChIP-seq
GSM3712740
E12_DFL_Wt_H3K27ac_ChIP-seq
GSM3712741
E12_PFL_Wt_H3K27ac_ChIP-seq
GSM3712742
E12_DFL_delattP-Rel5_H3K27ac_ChIP-seq
GSM3712743
E12_PFL_delattP-Rel5_H3K27ac_ChIP-seq
GSM3712744
E12_DFL_Wt_EZH2_ChIP-seq
GSM3712745
E12_PFL_Wt_EZH2_ChIP-seq
GSM3712746
E12_DFL_Wt_RING1B_ChIP-seq
GSM3712747
E12_PFL_Wt_RING1B_ChIP-seq
GSM3712748
E12_4C_DFL_invattp-itga6_Hoxd4
GSM3712749
E12_4C_PFL_invattp-itga6_Hoxd4
GSM3712750
E12_4C_DFL_invattp-itga6_CS38
GSM3712751
E12_4C_4C_DFL_Wt_Hoxd4 [re-used]
GSM3712752
E12_4C_4C_PFL_Wt_Hoxd4 [re-used]
GSM3712753
E12_4C_4C_DFL_Wt_CS38 [re-used]
This SuperSeries is composed of the following SubSeries:
GSE129424
Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes [RNA-seq]
GSE129425
Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes [ChIP-seq]
GSE129426
Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes [4C-seq]
Relations
BioProject
PRJNA531217
Download family
Format
SOFT formatted family file(s)
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Supplementary file
Size
Download
File type/resource
GSE129427_RAW.tar
9.6 Gb
(http)
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TAR (of BEDGRAPH)
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