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Series GSE138078 Query DataSets for GSE138078
Status Public on Oct 18, 2019
Title PRRX1 overexpression in MDA-MB-231 breast cancer cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To investigate downstream targets of PRRX1, we used MDA-MB-231 (MDA231) breast cancer cells which express low level of PRRX1 to generate a stable cell line where human PRRX1 was ectopically overexpressed
(MDA231-PRRX1), and performed comparative microarray analyses. Interestingly, we found many miRNAs that were upregulated in MDA231-PRRX1 cells.
 
Overall design MDA231 cells were transduced with lentiviral vectors containing PRRX1, GFP and puromycine resistance cassette, and were selected with antibiotics. Pool of stably transduced cells were used for further analyses and microarray.
 
Contributor(s) Ocaña OH
Citation(s) 31712603
Submission date Sep 26, 2019
Last update date Jan 17, 2020
Contact name Angela Nieto
E-mail(s) anieto@umh.es
Organization name Instituto de Neurociencias (CSIC-UMH)
Department Developmental Neurobiology
Lab Cell Movements in Development and Disease
Street address Av. Ramón y Cajal s/n
City San Juan de Alicante
State/province Alicante
ZIP/Postal code 03550
Country Spain
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM4098791 MDA-C, biological replicate 1
GSM4098792 MDA-C, biological replicate 2
GSM4098793 MDA-C, biological replicate 3
Relations
BioProject PRJNA574460

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138078_RAW.tar 48.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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