NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE141201 Query DataSets for GSE141201
Status Public on May 01, 2020
Title Diphthamide modification of eEF2 is required for gut tumor-like hyperplasia induced by oncogenic Ras
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Eukaryotic elongation factor 2 (eEF2) undergoes a unique post-translational modification called diphthamidation. Although eEF2 diphthamidation is highly conserved, its pathophysiological function is still largely unknown. To elucidate the function of diphthamidation in tumor, we examined the involvement of diphthamidation pathway enzyme Dph5 in tumor progression in Drosophila adult gut. Expression of oncogenic RasV12 in gut intestinal stem cells (ISCs) and enteroblasts (EBs) causes hypertrophy and disruption of gut epithelia, and shortened lifespan. Knockdown of dph5 ameliorated these pathogenic phenotypes. Dph5 is required for gross translation activation and high dMyc protein level in RasV12 tumor-like hyperplasia. Transcriptome analysis revealed that Dph5 is involved in the regulation of ribosome biogenesis genes. These results suggest that diphthamidation is required for translation activation partly through the regulation of ribosome biogenesis in Ras-induced tumor-like hyperplasia model in Drosophila gut.
 
Overall design Total RNA was extracted from the whole gut of each mutant adult flies (15 guts/sample) .N = 4 for each group.
 
Contributor(s) Sakurai KT, Kimura M, Miura M
Citation(s) 31828897
Submission date Nov 29, 2019
Last update date Aug 01, 2020
Contact name Miura Masayuki
Organization name The University of Tokyo
Department Graduate School of Pharmaceutical Sciences
Lab Genetics Lab
Street address 7-3-1 Hongo
City Bunkyo-ku, Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL17277 Agilent-040871 Drosophila melanogaster 8X60K with Spike (Probe Name version)
Samples (14)
GSM4197123 LacZIR_1
GSM4197124 LacZIR_2
GSM4197125 Dph5IR_1
Relations
BioProject PRJNA592564

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE141201_RAW.tar 42.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap