NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE142632 Query DataSets for GSE142632
Status Public on Oct 23, 2020
Title Microarray from both control and activated Hematopoietic stem cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Activation of mostly quiescent hematopoietic stem cells (HSC) is a prerequisite for life-long blood production. This process requires major molecular adaptations to meet the regulatory and metabolic requirements for cell division. The mechanisms governing cellular reprograming upon stem cell activation and their subsequent return to quiescence are still not fully characterized. Here, we describe a central role for a selective type of autophagy (CMA) in sustaining adult HSC function both through to stem cell protein quality control and to timely stimulation of linoleic fatty acid metabolism upon HSC activation. We identify that reduced CMA in old HSC contributes to the loss of stem cell activity during aging and show that genetic or chemical activation of CMA can restore old HSC function. Together, our findings provide mechanistic insights into a new role for CMA in sustaining long-term HSC quality control, appropriate energetics and overall hematopoietic stem cell function. Our work supports that CMA may be a promising therapeutic target to enhance hematopoietic stem cell function in conditions such as aging or stem cell transplantation.
We used microarrays to identify the most affected genes and pathways by CMA deficiency in both basal and activated conditions.
 
Overall design Mice were injected with a single dose of 5FU to activate HSCs, mice were sacrificed and bone marrow were taken and sorted with hematopoietic stem and progenitor cell markers at day0 and day8 after the injection.
 
Contributor(s) Cuervo A, Dong S
Citation(s) 33442062
Submission date Dec 26, 2019
Last update date Jan 22, 2021
Contact name Shuxian Dong
E-mail(s) dongshuxian0920@yahoo.com
Phone 9143548196
Organization name albert einstein college of medicine
Street address 1300 morris park ave., Chanin 504
City BRONX
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (4)
GSM4233214 Ctrl LSK cells Basal
GSM4233215 AMKO LSK cells Basal
GSM4233216 Ctrl LSK cells 5FU
Relations
BioProject PRJNA597780

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142632_RAW.tar 36.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap