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Series GSE147822 Query DataSets for GSE147822
Status Public on Apr 29, 2020
Title Generation of an enteric smooth muscle cell line from pig ileum
Organism Sus scrofa
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to characterize a single-cell clone derived from pig ileum epithelium. Analyses including RNA-seq demonstrated that this clone was derived from an enteric smooth muscle cell. This clone is named PIC7 in the manuscript.
 
Overall design Duplicate RNA-seq libraries were prepared and sequenced from the clone originally named PSI.
 
Contributor(s) Jiang H, Yao W
Citation(s) 32249920
Submission date Mar 31, 2020
Last update date Apr 29, 2020
Contact name Honglin Jiang
E-mail(s) hojiang@vt.edu
Phone 540-231-1859
Organization name Virginia Polytechnic Institute and State University
Department Animal and Poultry Sciences
Street address 3130 Litton Reaves Hall
City Blacksburg
State/province VA
ZIP/Postal code 24061
Country USA
 
Platforms (1)
GPL11429 Illumina HiSeq 2000 (Sus scrofa)
Samples (2)
GSM4446544 PSI_1
GSM4446545 PSI_2
Relations
BioProject PRJNA621635
SRA SRP254774

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147822_PSI_FPKM.txt.gz 281.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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