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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 11, 2011 |
| Title |
Illumina HiSeq 2000 (Sus scrofa) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Sus scrofa |
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|
| |
|
| Submission date |
Jan 11, 2011 |
| Last update date |
Sep 25, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1840)
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GSM653220, GSM653221, GSM653222, GSM653223, GSM653224, GSM653225
GSM753781, GSM753782, GSM753783, GSM753784, GSM753785, GSM753786, GSM753787, GSM753788, GSM753789, GSM753790, GSM753791, GSM753792, GSM753793, GSM753794, GSM753795, GSM753796, GSM753797, GSM753798, GSM753799, GSM753800, GSM753801, GSM753802, GSM753803, GSM753804, GSM753805, GSM753806, GSM753807, GSM753808, GSM753809, GSM753810, GSM753811, GSM753812, GSM753813, GSM753814, GSM753815, GSM753816, GSM753817, GSM753818, GSM753819, GSM753820, GSM753821, GSM753822, GSM753823, GSM753824, GSM753825, GSM753826, GSM753827, GSM753828, GSM753829, GSM753830, GSM753831, GSM753832, GSM753833, GSM753834, GSM753835, GSM753836, GSM753837, GSM753838, GSM753839, GSM753840, GSM753841, GSM753842, GSM753843, GSM753844, GSM753845, GSM753846, GSM753847, GSM753848, GSM753849, GSM753850, GSM753851, GSM753852, GSM753853, GSM753854, GSM753855, GSM753856, GSM753857, GSM753858, GSM753859, GSM753860, GSM753861, GSM753862, GSM753863, GSM753864, GSM753865, GSM753866, GSM753867, GSM753868, GSM753869, GSM753870, GSM753871, GSM753872, GSM753873, GSM753874, GSM753875, GSM753876, GSM753877, GSM753878, GSM753879, GSM753880, GSM753881, GSM753882, GSM753883, GSM753884, GSM753885, GSM753886, GSM753887, GSM753888, GSM753889, GSM753890, GSM753891, GSM753892, GSM753893, GSM753894, GSM753895, GSM753896, GSM753897, GSM753898, GSM753899, GSM753900, GSM753901, GSM753902, GSM753903, GSM753904, GSM753905, GSM753906, GSM753907, GSM753908, GSM753909, GSM753910, GSM753911, GSM753912, GSM753913, GSM753914, GSM753915, GSM753916, GSM753917, GSM753918, GSM753919, GSM753920, GSM753921, GSM753922, GSM753923, GSM753924, GSM753925, GSM753926, GSM753927, GSM753928, GSM753929, GSM753930, GSM753931, GSM753932, GSM753933, GSM753934, GSM753935, GSM753936, GSM753937, GSM753938, GSM753939, GSM753940, GSM753941, GSM753942, GSM753943, GSM753944, GSM753945, GSM753946, GSM753947, GSM753948, GSM753949, GSM753950, GSM753951, GSM753952, GSM753953, GSM753954, GSM753955, GSM753956, GSM753957, GSM753958, GSM753959, GSM753960, GSM1074091, GSM1074092, GSM1074093, GSM1074094, GSM1080023, GSM1080024, GSM1080025, GSM1080026, GSM1080027, GSM1080028, GSM1080029, GSM1080030, GSM1080031, GSM1080032, GSM1080033, GSM1080034, GSM1080035, GSM1080036, GSM1080037, GSM1080038, GSM1080039, GSM1080040, GSM1080041, GSM1080042, GSM1099038, GSM1099039, GSM1099040, GSM1099041, GSM1099042, GSM1099043, GSM1138185, GSM1138186, GSM1138187, GSM1138188, GSM1138189, GSM1138190, GSM1138191, GSM1138192, GSM1138193, GSM1138194, GSM1138195, GSM1138196, GSM1184425, GSM1184426, GSM1184427, GSM1184428, GSM1220270, GSM1220271, GSM1220272, GSM1220273, GSM1220274, GSM1220275, GSM1227159, GSM1227160, GSM1227161, GSM1227162, GSM1227163, GSM1227164, GSM1241829, GSM1241830, GSM1246252, GSM1246253, GSM1256170, GSM1256171, GSM1256172, GSM1256173, GSM1256174, GSM1256175, GSM1256176, GSM1256177, GSM1256178, GSM1256179, GSM1290652, GSM1290653, GSM1290654, GSM1290655, GSM1290656, GSM1290657, GSM1290658, GSM1290659, GSM1290660, GSM1299964, GSM1299965, GSM1299966, GSM1299967, GSM1307869, GSM1307870, GSM1341475, GSM1341476, GSM1341477, GSM1341478, GSM1341479, GSM1341480, GSM1341481, GSM1341482, GSM1341483, GSM1341484, GSM1341485, GSM1341486, GSM1341487, GSM1341488, GSM1341489, GSM1341490, GSM1341491, GSM1341492, GSM1341493, GSM1341494, GSM1341495, GSM1341496, GSM1341497, GSM1341498, GSM1341499, GSM1341500, GSM1341501, GSM1341502, GSM1341503, GSM1341504, GSM1341505, GSM1341506, GSM1341507, GSM1341508, GSM1341509, GSM1341510, GSM1341511, GSM1341512, GSM1341513, GSM1341514, GSM1341515, GSM1341516, GSM1341517, GSM1341518, GSM1341519, GSM1341520, GSM1341521, GSM1341522, GSM1341523, GSM1341524, GSM1341525, GSM1341526, GSM1341527, GSM1341528, GSM1341529, GSM1341530, GSM1341531, GSM1341532, GSM1341533, GSM1341534, GSM1341535, GSM1341536, GSM1341537, GSM1341538, GSM1341539, GSM1341540, GSM1341541, GSM1341542, GSM1341543, GSM1341544, GSM1341545, GSM1341546, GSM1341547, GSM1341548, GSM1341549, GSM1341550, GSM1341551, GSM1341552, GSM1341553, GSM1341554, GSM1341555, GSM1341556, GSM1341557, GSM1341558, GSM1341559, GSM1341560, GSM1341561, GSM1341562, GSM1341563, GSM1341564, GSM1341565, GSM1341566, GSM1531551, GSM1531552, GSM1531553, GSM1567693, GSM1567694, GSM1567695, GSM1579058, GSM1579059, GSM1660930, GSM1660931, GSM1660932, GSM1660933, GSM1660934, GSM1660935, GSM1660936, GSM1660937, GSM1660938, GSM1660939, GSM1660940, GSM1660941, GSM1660942, GSM1660943, GSM1660944, GSM1660945, GSM1660946, GSM1660947, GSM1660948, GSM1660949, GSM1673697, GSM1673698, GSM1693038, GSM1693039, GSM1693040, GSM1693041, GSM1693042, GSM1693043, GSM1693044, GSM1693045, GSM1693046, GSM1715563, GSM1715566, GSM1829780, GSM1829781, GSM1829782, GSM1829783, GSM1829784, GSM1829785, GSM1829786, GSM1829787, GSM1829788, GSM1829789, GSM1829790, GSM1829791, GSM1829792, GSM1829793, GSM1829794, GSM1829795, GSM1829796, GSM1829797, GSM1829798, GSM1829799, GSM1829800, GSM1829801, GSM1829802, GSM1829803, GSM1829804, GSM1829805, GSM1829806, GSM1829807, GSM1829808, GSM1829810, GSM1829811, GSM1829813, GSM1829815, GSM1829817, GSM1829819, GSM1829821, GSM1829823, GSM1829825, GSM1829827, GSM1829829, GSM1829831, GSM1829833, GSM1829834, GSM1829835, GSM1829836, GSM1829837, GSM1829838, GSM1829839, GSM1829840, GSM1829841, GSM1829842, GSM1829843, GSM1829844, GSM1829845, GSM1829846, GSM1829847, GSM1829848, GSM1829849, GSM1829850, GSM1829851, GSM1829852, GSM1829853, GSM1829854, GSM1829855, GSM1829856, GSM1829857, GSM1829858, GSM1829859, GSM1829860, GSM1829861, GSM1829862, GSM1829863, GSM1829864, GSM1829865, GSM1829866, GSM1829867, GSM1829868, GSM1829869, GSM1829870, GSM1829871, GSM1829872, GSM1829873, GSM1829874, GSM1829875, GSM1829876, GSM1829877, GSM1829878, GSM1829879, GSM1829880, GSM1829881, GSM1829882, GSM1829883, GSM1829884, GSM1829885...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
|
| Series (123)
|
| GSE26382 |
A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing (mRNA) |
| GSE26572 |
A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing |
| GSE30344 |
An atlas of DNA methylomes in pig adipose and muscle tissues |
| GSE43892 |
Transcriptome data used for gene annotation |
| GSE44171 |
RNA deep sequencing reveals novel candidate genes and polymorphisms in boar testis and liver tissues with divergent androstenone levels. |
| GSE45204 |
Whole transcriptome analyses of three Berkshire and three Korean native pig fat, liver and muscle tissue using RNA-Seq |
| GSE46755 |
Digital gene expression tag profiling of pig subcutaneous adipose tissue from postnatal 0 day to 7 years |
| GSE48777 |
In search of epigenetic marks in testes and sperm cells of differentially fed boars [RNA-Seq] |
| GSE48778 |
In search of epigenetic marks in testes and sperm cells of differentially fed boars |
| GSE50500 |
MicroRNA transcriptome in weaning and sucking porcine intestines |
| GSE50716 |
Genome-wide DNA methylation changes in skeletal muscle between young and middle-aged pigs [methylation] |
| GSE51282 |
Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets (RNA-Seq) |
| GSE51476 |
Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets (MeDIP-seq) |
| GSE51477 |
Dysregulation of genome-wide gene expression and DNA methylation in abnormal cloned piglets |
| GSE51968 |
Transcriptome sequencing of porcine hypothalamic samples |
| GSE53387 |
Mammalian embryo comparison identifies novel pluripotency genes associated with the naïve or primed state |
| GSE53747 |
Marked methylation changes of intestinal genes in the neonatal period of preterm neonates |
| GSE54093 |
Transcriptomic analysis of Rongchang pig brains and livers |
| GSE55674 |
Fed State Prior to Hemorrhagic Shock and Polytrauma in a Porcine Model Results in Altered Liver Transcriptomic Response |
| GSE62696 |
Hepatic transcriptome changes in testosterone-deficient pigs fed a high-fat diet |
| GSE64275 |
High-throughput sequencing identifies miRNAs and their targets involved in porcine muscle development |
| GSE64737 |
The porcine microRNA transcriptome response to transmissible gastroenteritis virus infection |
| GSE68007 |
Long RNAs expression profiling of 20 Italian Large White pig backfat |
| GSE68490 |
Comparative anterior pituitary miRNA and mRNA expression profiles of Bama minipigs and Landrace pigs reveal potential molecular network involved in animal postnatal growth [mRNA-Seq] |
| GSE68491 |
Comparative anterior pituitary miRNA and mRNA expression profiles of Bama minipigs and Landrace pigs reveal potential molecular network involved in animal postnatal growth |
| GSE69113 |
Transcriptome analysis of Liangshan pig muscle development at the growth curve inflection point and asymptotic stages using digital gene expression profiling |
| GSE70002 |
Genome-wide gene expression and DNA methylation reveals Genetic and Epigenetic differences in cloned piglets and conventionally bred normal piglets (RNA-Seq) |
| GSE70004 |
Genome-wide gene expression and DNA methylation reveals Genetic and Epigenetic differences in cloned piglets and conventionally bred normal piglets (MeDIP-Seq) |
| GSE70005 |
Genome-wide gene expression and DNA methylation reveals Genetic and Epigenetic differences in cloned piglets and conventionally bred normal piglets |
| GSE71205 |
Genome-wide analysis of the transcriptional response to porcine reproductive and respiratory syndrome virus infection at the maternal/fetal interface and in the fetus |
| GSE71550 |
A comprehensive microRNA expression profile related to hypoxic adaptation in Tibetan pig |
| GSE71832 |
Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development |
| GSE72115 |
RNA Deep Sequencing Reveals Expression Patterns of Long Non-coding RNAs during Swine Ovary Development |
| GSE72388 |
Age and Nursing Affect the Neonatal Porcine Uterine Transcriptome |
| GSE73566 |
Biceps femoris muscle transcriptome in pure and crossbred Iberian pigs at birth |
| GSE73695 |
Next Generation Sequencing Facilitates Quantitative Analysis of Endometrium Transcriptomes During Porcine Embryo Implantation. |
| GSE73763 |
Total RNA sequencing in multiple Sus Scrofa tissues reveals novel long non-coding RNAs functioning in skeletal muscle development |
| GSE75304 |
RNA-sequencing analysis of gilt blood gene expression during Porcine Reproductive and Respiratory Syndrom Virus infection |
| GSE75785 |
The microRNA expression profiles changes associated with constant heat stress in porcine skeletal muscle as measured by deep sequencing |
| GSE75850 |
Transcriptome sequencing of porcine liver samples |
| GSE76156 |
The porcine microRNA transcriptome response to porcine cytomegalovirus infection |
| GSE78762 |
Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection |
| GSE79507 |
RNA-Sequencing for Additional Molar Germs Transcriptomes at Stages of Early Development in Miniature Pigs |
| GSE79990 |
Genome-wide DNA methylation profile of developing deciduous tooth germ in miniature pigs |
| GSE80096 |
DNA methylation landscape of fat deposit and fatty acid composition variation in obese and lean pigs |
| GSE80613 |
RNA-Seq results of six Chinese Sutai piglets from ear tissue based on Illumina HiSeq 2000 platform |
| GSE80665 |
RNA-seq of porcine inner ear stria vascularis |
| GSE81155 |
Genome-wide profiling of the nascent transcription of non-coding RNAs in porcine heart after myocardial infarction |
| GSE81759 |
Genome-wide DNA methylation profiling between oxidative and glycolytic skeletal muscles [MeDIP-seq] |
| GSE81766 |
Genome-wide DNA methylation and mRNA and the microRNA transcriptome profiling between oxidative and glycolytic skeletal muscles |
| GSE83280 |
Transcriptomal analysis revealed that the metabolism and structure of porcine Longissimus Dorsi muscle were changed by constant heat stress |
| GSE84347 |
Transcriptome Profile of Lung Dendritic Cells after In Vitro Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Infection |
| GSE86086 |
RNA sequencing data from pigs with high and low intramuscular fat content. |
| GSE86441 |
Longissimus dorsi muscle transcriptome in pure and crossbred Iberian pigs at birth and growing stages |
| GSE87361 |
Epigenetic Modifiers Facilitate Induction and Pluripotency of Porcine iPSCs |
| GSE87775 |
VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development [RNA-seq] |
| GSE87776 |
VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development |
| GSE87790 |
Integrated transcriptomic and proteomic analysis of the molecular cargo of extracellular vesicles derived from porcine adipose tissue-derived mesenchymal stromal/stem cells |
| GSE88860 |
MicroRNAs Expression Profiles Differ between Primary Myofiber of Lean and Obese Pigs breeds |
| GSE89343 |
microRNAs in early pregnant porcine endometrium revealed by Illumina sequencing |
| GSE90510 |
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs [DNA methylation] |
| GSE90511 |
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs [RNA-seq] |
| GSE90512 |
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs |
| GSE90901 |
Dynamic profiles of microRNAome in porcine liver |
| GSE92259 |
miRNA-seq of lung in two kinds of pig breeds after PCV2 injection |
| GSE92889 |
Systematic in vitro and in vivo characterization of Leukemia-inhibiting factor (LIF)- and Fibroblast growth factor (FGF) -derived porcine induced pluripotent stem cells (piPSC) vs. embryonic stages |
| GSE92897 |
Exogenous miRNA expression profiling in serum of pig and rat fed with different diets |
| GSE92981 |
Comparative transcriptomic and proteomic analysis provides insight into the key genes involved in high-altitude adaptation in Tibetan pig (RNA-seq) |
| GSE93021 |
Identification of Genes Related to Growth and Lipid Deposition from Transcriptome Profiles of Pig Muscle Tissue [mRNA] |
| GSE93022 |
Identification of Genes Related to Growth and Lipid Deposition from Transcriptome Profiles of Pig Muscle Tissue [miRNA] |
| GSE93023 |
Identification of Genes Related to Growth and Lipid Deposition from Transcriptome Profiles of Pig Muscle Tissue |
| GSE93855 |
Comparative transcriptomic analysis provides insights into high-altitude adaptation |
| GSE98108 |
Deep Sequencing of brain Transcriptome Reveals difference in immune response between domesticated pigs and wild boars |
| GSE99914 |
Potential Antigens Involved In Delayed Xenograft Rejection in a GGTA1/CMAH DKO Pig-To-Monkey Model |
| GSE101933 |
Evolution of an X-linked miRNA family predominately expressed in mammalian male germ cells |
| GSE106512 |
Transcriptome analyses reveal metabolic syndrome of adulthood with intrauterine growth restriction in a pig model |
| GSE107302 |
XIST derepression in active X chromosome hinders pig somatic cell nuclear transfer |
| GSE108570 |
RNA-seq analysis of swine reproductive tissues including endometrium, oviduct and ovary through the estrous |
| GSE110414 |
RNA-sequencing of placenta during the second half of gestation in sows |
| GSE111411 |
Transcriptome sequencing of PCV2 ORF5 overexpressed PK15 cells |
| GSE115512 |
The effect of African Swine Fever Virus infection on porcine host microRNAs |
| GSE116951 |
Identification of candidate genes and regulatory factors underlying intramuscular fat content through longissimus dorsi transcriptome analyses in heavy Iberian pigs |
| GSE118150 |
Peripheral Blood Transcriptomic Analysis for Salmonella Infection in Pig |
| GSE120266 |
Peripheral Blood miRNA Transcriptomic Analysis for Salmonella Infection in Pig |
| GSE122983 |
Transcriptome Analysis of the Endometrium from Chinese Erhualian sows that differ in Calcium Ion Concentration and Litter Size |
| GSE123274 |
Endo-siRNAs repress expression of SINE1B during in vitro maturation of porcine oocyte |
| GSE124099 |
Early cleavage of porcine preimplantation embryos is regulated by tRNAGln-TTG-derived small RNAs present in mature spermatozoa |
| GSE124645 |
Peripheral Blood Transcriptomic and miRNA Transcriptomic Analyses for Salmonella Infection in Pig |
| GSE133723 |
A Physiological Biomimetic Culture System for Pig and Human Heart Slices |
| GSE134461 |
Super deepSAGE sequencing of normal porcine tissues |
| GSE136589 |
The role of circular RNAs in porcine antral follicular degeneration |
| GSE136754 |
Epigenetic and transcriptomic characterization of pure adipocyte fractions from obese pigs identifies candidate pathways controlling metabolism |
| GSE136917 |
RNA-seq of pig small inteseine cells samples from different treatment groups |
| GSE137087 |
small RNA seqencing of pig small inteseine cells samples from different treatment groups |
| GSE137088 |
Pig small inteseine cells samples from different treatment groups |
| GSE138428 |
RNA-seq of IPEC-J2 cells samples from different miRNA treatment groups |
| GSE140460 |
Longissimus dorsi muscle transcriptome in pure (Iberian x Iberian) and crossbred (Iberian x Large White) pig fetuses at gestation day 77 |
| GSE145956 |
Comparative transcriptomic analysis of subcutaneous adipose tissue from local pig breeds |
| GSE147822 |
Generation of an enteric smooth muscle cell line from pig ileum |
| GSE148236 |
Porcine neutrophils infected by Salmonella |
| GSE153174 |
Host transcriptional response to porcine reproductive and respiratory syndrome virus persistent infection |
| GSE155260 |
EZH2 RIP-seq identifies pNEAT1 as regulator of myogenesis in pigs |
| GSE155915 |
Differences in loin tenderness of Iberian pigs explained through dissimilarities in their transcriptome expression profile |
| GSE157688 |
Genome-wide single nucleotide polymorphism array and whole-genome sequencing reveal the inbreeding progression of Banna minipig inbred line [Seq] |
| GSE157935 |
Genome-wide single nucleotide polymorphism array and whole-genome sequencing reveal the inbreeding progression of Banna minipig inbred line |
| GSE159817 |
Muscle transcriptome profile of Alentejano and Bísaro pig breeds |
| GSE163513 |
Consequences of a low protein diet in the liver and longissimus dorsi transcriptome of Duroc x Iberian crossbred pigs |
| GSE164391 |
Gene expression data of the subcutaneous adipose tissue from entire male, immunocastrated and surgically castrated pigs |
| GSE167340 |
ChIP-seq analysis of porcine alveolar macrophages infected with T. gondii RH |
| GSE168427 |
Extensive transcriptome alteration in response to acute heat stress in porcine immature Sertoli cells |
| GSE184968 |
Transcriptome analysis of muscle from two pig breeds with varying muscularity |
| GSE184970 |
Muscle from two pig breeds with varying muscularity |
| GSE189380 |
Transcriptome analysis of synthetic miR-124 sponge oligo and Salmonella-treated pig PBMCs |
| GSE193831 |
Exploring differentially expressed genes related to metabolism by RNA-Seq in porcine embryonic fibroblast after insulin treatment |
| GSE197451 |
Transcriptomic analysis of porcine PSCs (pLCDM and pPSC(KOFL)) and pLCDM_TSC induced from pLCDM |
| GSE199641 |
Effect of Hypoxia Preconditioning on the Regenerative Capacity of Adipose Tissue-Derived Mesenchymal Stem Cells in an Experimental Model of Atherosclerotic Renal Artery Stenosis |
| GSE201408 |
Hypothalamic transcriptome in pure (Iberian x Iberian) and crossbred (Iberian x Large White) pigs at 2 months old |
| GSE203574 |
Analysis of Long non-coding RNAs in Adipose Tissue of Pigs Fed Resveratrol-supplemented Diet |
| GSE222010 |
The porcine piRNA transcriptome response to Senecavirus A infection |
| GSE230506 |
Long- and short-read RNA sequencing from five reproductive organs of boar. |
| GSE233410 |
Integrated analysis of lncRNA, miRNA and mRNA expression profiles reveal regulatory pathways associated with pig testis function |
| GSE236909 |
Lgr5-expressing secretory cells form a Wnt inhibitory niche in cartilage critical for chondrocyte identity |
| GSE264195 |
Impact of olive by-products based diets on the backfat transcriptome of growing Iberian pigs |
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| Supplementary data files not provided |
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